MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 121724 bp
Accession: NZ_CP104870 Location: 2771454..2893177 Organism: Pseudomonas aeruginosa strain PALA9 Replicon: chromosome
Accession: NZ_CP104870 Location: 2771454..2893177 Organism: Pseudomonas aeruginosa strain PALA9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA9_RS13095 (PALA9_02606) | 2766770..2767918 | + | 1149 | WP_003090354.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
| PALA9_RS13100 (PALA9_02607) | 2768260..2768904 | + | 645 | WP_003090351.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PALA9_RS13105 (PALA9_02608) | 2768905..2770731 | + | 1827 | WP_003097551.1 | excinuclease ABC subunit UvrC | - |
| PALA9_RS13110 (PALA9_02609) | 2770765..2771325 | + | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PALA9_RS13120 (PALA9_02611) | 2771697..2773631 | + | 1935 | WP_023083474.1 | hypothetical protein ; Integrase | Integrase |
| PALA9_RS13125 | 2773925..2774258 | + | 334 | Protein_2591 | DUF2790 domain-containing protein | - |
| PALA9_RS13130 (PALA9_02612) | 2774437..2775534 | - | 1098 | WP_006226249.1 | IS5 family transposase ISXoo14 | Transposase |
| PALA9_RS13135 (PALA9_02613) | 2775693..2778812 | - | 3120 | WP_006226248.1 | efflux RND transporter permease subunit | - |
| PALA9_RS13140 (PALA9_02614) | 2778809..2780326 | - | 1518 | WP_006226247.1 | hypothetical protein | VF |
| PALA9_RS13145 (PALA9_02615) | 2780342..2781649 | - | 1308 | WP_006226246.1 | TolC family protein | - |
| PALA9_RS13150 (PALA9_02616) | 2781725..2782036 | - | 312 | WP_006226245.1 | hypothetical protein | - |
| PALA9_RS13155 | 2782323..2782964 | - | 642 | WP_023657317.1 | LysR substrate-binding domain-containing protein | - |
| PALA9_RS13160 | 2783072..2783377 | + | 306 | WP_003097526.1 | helix-turn-helix transcriptional regulator | - |
| PALA9_RS13165 (PALA9_02618) | 2783382..2784272 | - | 891 | WP_003097524.1 | LysR family transcriptional regulator | - |
| PALA9_RS13170 (PALA9_02619) | 2784506..2784790 | - | 285 | WP_003090336.1 | CopK family periplasmic copper-binding protein | - |
| PALA9_RS13175 (PALA9_02620) | 2784919..2785845 | - | 927 | WP_003097522.1 | copper homeostasis membrane protein CopD | - |
| PALA9_RS13180 (PALA9_02621) | 2785850..2786236 | - | 387 | WP_003090319.1 | copper homeostasis periplasmic binding protein CopC | - |
| PALA9_RS13185 (PALA9_02622) | 2786378..2788684 | - | 2307 | WP_134544982.1 | heavy metal translocating P-type ATPase | - |
| PALA9_RS13190 (PALA9_02623) | 2788972..2789244 | - | 273 | WP_006226242.1 | DUF2933 domain-containing protein | - |
| PALA9_RS13195 (PALA9_02624) | 2789278..2789763 | - | 486 | WP_006226241.1 | DUF411 domain-containing protein | - |
| PALA9_RS13200 (PALA9_02625) | 2789801..2790781 | - | 981 | WP_006226240.1 | copper resistance protein B | - |
| PALA9_RS13205 (PALA9_02626) | 2790807..2792735 | - | 1929 | WP_023083476.1 | copper resistance system multicopper oxidase | - |
| PALA9_RS13210 (PALA9_02627) | 2792979..2793671 | + | 693 | WP_003097513.1 | Transcriptional regulatory protein CusR | VF |
| PALA9_RS13215 (PALA9_02628) | 2793643..2795079 | + | 1437 | WP_006226053.1 | Sensor histidine kinase CusS | VF |
| PALA9_RS13220 (PALA9_02629) | 2795714..2796040 | + | 327 | WP_003090285.1 | DUF2933 domain-containing protein | - |
| PALA9_RS13225 (PALA9_02630) | 2796059..2796358 | + | 300 | WP_003090284.1 | heavy-metal-associated domain-containing protein | - |
| PALA9_RS13230 (PALA9_02631) | 2796367..2798034 | + | 1668 | WP_003090283.1 | DUF3141 domain-containing protein | - |
| PALA9_RS13235 (PALA9_02632) | 2798330..2799463 | + | 1134 | WP_006226052.1 | acetate/propionate family kinase | - |
| PALA9_RS13240 (PALA9_02633) | 2799681..2800133 | + | 453 | WP_016852803.1 | MerR family DNA-binding protein | - |
| PALA9_RS13245 (PALA9_02634) | 2800288..2801604 | + | 1317 | WP_006226050.1 | cyclopropane-fatty-acyl-phospholipid synthase family protein | - |
| PALA9_RS13250 (PALA9_02635) | 2801722..2804151 | + | 2430 | WP_006226049.1 | D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase | - |
| PALA9_RS13255 (PALA9_02636) | 2804329..2804931 | - | 603 | WP_006226048.1 | hypothetical protein | VF |
| PALA9_RS13260 (PALA9_02637) | 2805037..2805867 | + | 831 | WP_003090276.1 | hypothetical protein | VF |
| PALA9_RS13265 (PALA9_02638) | 2805876..2807138 | - | 1263 | WP_003090275.1 | MgtC/SapB family protein | - |
| PALA9_RS13270 (PALA9_02639) | 2807135..2808190 | - | 1056 | WP_003090274.1 | type II glyceraldehyde-3-phosphate dehydrogenase | - |
| PALA9_RS13275 (PALA9_02640) | 2808218..2809840 | - | 1623 | WP_023083477.1 | AarF/UbiB family protein | - |
| PALA9_RS13280 (PALA9_02641) | 2809837..2810868 | - | 1032 | WP_006226046.1 | hydroxyacid dehydrogenase | - |
| PALA9_RS13285 (PALA9_02642) | 2810865..2811119 | - | 255 | WP_006226045.1 | hypothetical protein | - |
| PALA9_RS13290 (PALA9_02643) | 2811116..2811760 | - | 645 | WP_006226044.1 | hypothetical protein | - |
| PALA9_RS13295 (PALA9_02644) | 2811814..2812713 | - | 900 | WP_006226043.1 | ribose-phosphate pyrophosphokinase | - |
| PALA9_RS13300 (PALA9_02645) | 2812710..2814263 | - | 1554 | WP_006226042.1 | thymidine phosphorylase family protein | - |
| PALA9_RS13305 (PALA9_02646) | 2814260..2815621 | - | 1362 | WP_003090261.1 | MBL fold metallo-hydrolase | - |
| PALA9_RS13310 (PALA9_02647) | 2815647..2816144 | - | 498 | WP_023083478.1 | TPM domain-containing protein | - |
| PALA9_RS13315 (PALA9_02648) | 2816146..2817051 | - | 906 | WP_023083479.1 | TPM domain-containing protein | - |
| PALA9_RS13320 (PALA9_02649) | 2817053..2817664 | - | 612 | WP_003090252.1 | LemA family protein | - |
| PALA9_RS13325 (PALA9_02650) | 2817661..2818968 | - | 1308 | WP_006226039.1 | MFS transporter | - |
| PALA9_RS13330 (PALA9_02651) | 2819000..2821465 | - | 2466 | WP_006226038.1 | heavy metal translocating P-type ATPase | - |
| PALA9_RS13335 (PALA9_02652) | 2821498..2822361 | - | 864 | WP_003090242.1 | polyphosphate kinase 2 | - |
| PALA9_RS13340 (PALA9_02653) | 2822372..2822530 | - | 159 | WP_010791738.1 | hypothetical protein | - |
| PALA9_RS13345 (PALA9_02654) | 2822532..2823182 | - | 651 | WP_003090238.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| PALA9_RS13350 (PALA9_02655) | 2823179..2823418 | - | 240 | WP_006226037.1 | DUF2933 domain-containing protein | - |
| PALA9_RS13355 (PALA9_02656) | 2823430..2823831 | - | 402 | WP_003090236.1 | hypothetical protein | - |
| PALA9_RS13360 | 2823986..2824420 | - | 435 | WP_079279895.1 | hypothetical protein | - |
| PALA9_RS13365 (PALA9_02657) | 2824564..2824986 | + | 423 | WP_003090234.1 | MerR family DNA-binding protein | - |
| PALA9_RS13370 (PALA9_02658) | 2825221..2825646 | - | 426 | WP_006226036.1 | IS607 family transposase ISLhe9 | Transposase |
| PALA9_RS13375 (PALA9_02659) | 2825694..2826158 | + | 465 | WP_010791737.1 | hypothetical protein | - |
| PALA9_RS13380 (PALA9_02660) | 2826195..2827490 | - | 1296 | WP_006226034.1 | ISL3 family transposase ISIde1 | Transposase |
| PALA9_RS13385 | 2827709..2827930 | + | 222 | WP_099459023.1 | MerR family DNA-binding transcriptional regulator | - |
| PALA9_RS13390 (PALA9_02661) | 2827912..2829726 | - | 1815 | WP_010791736.1 | MobH family relaxase | - |
| PALA9_RS13395 (PALA9_02662) | 2830040..2830666 | + | 627 | WP_003124463.1 | hypothetical protein | - |
| PALA9_RS13400 (PALA9_02663) | 2830679..2831311 | + | 633 | WP_003121528.1 | RES family NAD+ phosphorylase | - |
| PALA9_RS13405 (PALA9_02664) | 2831392..2831757 | + | 366 | WP_003090216.1 | DUF3742 family protein | - |
| PALA9_RS13410 (PALA9_02665) | 2831769..2833289 | - | 1521 | WP_003090214.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA9_RS13415 (PALA9_02666) | 2833303..2833662 | - | 360 | WP_003090212.1 | hypothetical protein | - |
| PALA9_RS13420 (PALA9_02667) | 2833659..2835053 | - | 1395 | WP_006226032.1 | integrating conjugative element protein | - |
| PALA9_RS13425 (PALA9_02668) | 2835063..2836013 | - | 951 | WP_003090208.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA9_RS13430 (PALA9_02669) | 2836010..2836456 | - | 447 | WP_006226031.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA9_RS13435 (PALA9_02670) | 2836621..2837115 | - | 495 | WP_003090203.1 | JAB domain-containing protein | - |
| PALA9_RS13440 (PALA9_02671) | 2837291..2838058 | - | 768 | WP_003090202.1 | thioredoxin domain-containing protein | - |
| PALA9_RS13445 (PALA9_02672) | 2838083..2840974 | - | 2892 | WP_006226030.1 | conjugative transfer ATPase | - |
| PALA9_RS13450 (PALA9_02673) | 2840974..2841429 | - | 456 | WP_003090198.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA9_RS13455 (PALA9_02674) | 2841410..2842828 | - | 1419 | WP_006226029.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA9_RS13460 (PALA9_02675) | 2842818..2843729 | - | 912 | WP_006226028.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA9_RS13465 (PALA9_02676) | 2843726..2844418 | - | 693 | WP_003090182.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA9_RS13470 (PALA9_02677) | 2844415..2844813 | - | 399 | WP_003050133.1 | TIGR03750 family conjugal transfer protein | - |
| PALA9_RS13475 (PALA9_02678) | 2844825..2845184 | - | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA9_RS13480 (PALA9_02679) | 2845201..2845434 | - | 234 | WP_006226027.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA9_RS13485 (PALA9_02680) | 2845431..2845814 | - | 384 | WP_003090167.1 | RAQPRD family integrative conjugative element protein | - |
| PALA9_RS13490 (PALA9_02681) | 2846018..2846488 | + | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PALA9_RS13495 (PALA9_02682) | 2846485..2847060 | + | 576 | WP_003153636.1 | PIN domain-containing protein | Toxin Detail |
| PALA9_RS13500 (PALA9_02683) | 2847078..2847992 | + | 915 | WP_016852809.1 | AAA family ATPase | - |
| PALA9_RS13505 (PALA9_02684) | 2847989..2848459 | + | 471 | WP_003090160.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| PALA9_RS13510 (PALA9_02685) | 2848456..2848956 | + | 501 | WP_003090159.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| PALA9_RS13515 (PALA9_02686) | 2848956..2849858 | + | 903 | WP_003090158.1 | CBASS oligonucleotide cyclase | - |
| PALA9_RS13520 (PALA9_02687) | 2849897..2850622 | + | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| PALA9_RS13525 (PALA9_02688) | 2850632..2853256 | + | 2625 | WP_006226025.1 | AAA family ATPase | - |
| PALA9_RS13530 (PALA9_02689) | 2853297..2854047 | - | 751 | Protein_2672 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA9_RS13535 (PALA9_02690) | 2854044..2856236 | - | 2193 | WP_006226023.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA9_RS13540 (PALA9_02691) | 2856241..2856789 | - | 549 | WP_006226022.1 | integrating conjugative element protein | - |
| PALA9_RS13545 (PALA9_02692) | 2856786..2857388 | - | 603 | WP_006226021.1 | transglycosylase SLT domain-containing protein | - |
| PALA9_RS13550 (PALA9_02693) | 2857370..2858095 | - | 726 | WP_003120008.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA9_RS13555 (PALA9_02694) | 2858108..2858752 | - | 645 | WP_003120009.1 | hypothetical protein | - |
| PALA9_RS13560 (PALA9_02695) | 2858749..2859327 | - | 579 | WP_006217720.1 | hypothetical protein | VF |
| PALA9_RS13565 (PALA9_02696) | 2859496..2859816 | + | 321 | WP_003120011.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| PALA9_RS13570 (PALA9_02697) | 2859819..2860313 | + | 495 | WP_006226020.1 | arsenate reductase ArsC | - |
| PALA9_RS13575 (PALA9_02698) | 2860325..2861401 | + | 1077 | WP_006226019.1 | ACR3 family arsenite efflux transporter | - |
| PALA9_RS13580 (PALA9_02699) | 2861418..2861840 | + | 423 | WP_006217715.1 | arsenate reductase (glutaredoxin) | - |
| PALA9_RS13585 (PALA9_02700) | 2861833..2862555 | + | 723 | WP_003120015.1 | arsenical resistance protein ArsH | - |
| PALA9_RS13590 (PALA9_02701) | 2862614..2864893 | - | 2280 | WP_006226018.1 | helicase-related protein | - |
| PALA9_RS13595 (PALA9_02702) | 2865030..2865337 | - | 308 | Protein_2685 | hypothetical protein | - |
| PALA9_RS13600 (PALA9_02703) | 2865427..2865747 | - | 321 | WP_003120017.1 | hypothetical protein | - |
| PALA9_RS13605 (PALA9_02704) | 2865798..2866907 | - | 1110 | WP_006226016.1 | DUF6094 domain-containing protein | - |
| PALA9_RS13610 (PALA9_02705) | 2866972..2867622 | - | 651 | WP_006226015.1 | hypothetical protein | - |
| PALA9_RS13615 (PALA9_02706) | 2867727..2868068 | - | 342 | WP_006226014.1 | hypothetical protein | - |
| PALA9_RS13620 (PALA9_02707) | 2868171..2868497 | - | 327 | WP_006226013.1 | hypothetical protein | - |
| PALA9_RS13625 (PALA9_02708) | 2868592..2869281 | - | 690 | WP_006226012.1 | DUF3275 family protein | - |
| PALA9_RS13630 (PALA9_02709) | 2869340..2870269 | - | 930 | WP_006226011.1 | DUF3577 domain-containing protein | - |
| PALA9_RS13635 (PALA9_02710) | 2870636..2870989 | - | 354 | WP_006226010.1 | DUF3085 domain-containing protein | - |
| PALA9_RS13640 (PALA9_02711) | 2871131..2871943 | - | 813 | WP_006226009.1 | hypothetical protein | - |
| PALA9_RS13645 (PALA9_02712) | 2872231..2872509 | - | 279 | WP_003108989.1 | hypothetical protein | - |
| PALA9_RS13650 (PALA9_02713) | 2872606..2873343 | - | 738 | WP_003098947.1 | hypothetical protein | - |
| PALA9_RS13655 (PALA9_02714) | 2873557..2873949 | - | 393 | WP_003098949.1 | hypothetical protein | - |
| PALA9_RS13660 (PALA9_02715) | 2873971..2874183 | - | 213 | WP_003116833.1 | hypothetical protein | - |
| PALA9_RS13665 | 2874521..2874826 | - | 306 | WP_223656317.1 | hypothetical protein | - |
| PALA9_RS13670 (PALA9_02716) | 2875169..2875669 | - | 501 | WP_003098955.1 | signal peptidase II | - |
| PALA9_RS13675 (PALA9_02718) | 2875673..2878585 | - | 2913 | Protein_2701 | heavy metal translocating P-type ATPase | - |
| PALA9_RS13680 (PALA9_02719) | 2878677..2879075 | + | 399 | WP_003098965.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| PALA9_RS13685 | 2879530..2879733 | - | 204 | WP_023657334.1 | hypothetical protein | - |
| PALA9_RS13690 (PALA9_02720) | 2880151..2880786 | + | 636 | WP_003098972.1 | cation transporter | - |
| PALA9_RS13695 | 2881529..2881663 | - | 135 | WP_228777765.1 | hypothetical protein | - |
| PALA9_RS13700 (PALA9_02721) | 2881603..2883540 | - | 1938 | Protein_2706 | DNA topoisomerase III | - |
| PALA9_RS13705 (PALA9_02722) | 2883824..2884264 | - | 441 | WP_003098976.1 | single-stranded DNA-binding protein | - |
| PALA9_RS13710 (PALA9_02723) | 2884338..2884865 | - | 528 | WP_003098978.1 | DUF3158 family protein | - |
| PALA9_RS13715 (PALA9_02724) | 2884862..2885653 | - | 792 | WP_003098981.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA9_RS13720 (PALA9_02725) | 2886083..2887321 | - | 1239 | WP_006226008.1 | STY4528 family pathogenicity island replication protein | - |
| PALA9_RS13725 (PALA9_02726) | 2887325..2887885 | - | 561 | WP_003090097.1 | DUF2857 domain-containing protein | - |
| PALA9_RS13730 (PALA9_02727) | 2887900..2889579 | - | 1680 | WP_006226007.1 | ParB family protein | - |
| PALA9_RS13735 (PALA9_02728) | 2889572..2889841 | - | 270 | WP_003050422.1 | hypothetical protein | - |
| PALA9_RS13740 (PALA9_02729) | 2889825..2890700 | - | 876 | WP_003098988.1 | Sporulation initiation inhibitor protein Soj | VF |
| PALA9_RS13745 (PALA9_02730) | 2890743..2890955 | - | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| PALA9_RS13750 (PALA9_02731) | 2891074..2891820 | - | 747 | WP_003098991.1 | hypothetical protein | - |
| PALA9_RS13755 (PALA9_02732) | 2892271..2892771 | + | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| PALA9_RS13760 | 2893504..2893670 | - | 167 | Protein_2718 | LysR family transcriptional regulator | - |
| PALA9_RS13765 (PALA9_02734) | 2893816..2896794 | + | 2979 | WP_016852816.1 | transporter substrate-binding domain-containing protein | - |
| PALA9_RS13770 (PALA9_02735) | 2896885..2897418 | + | 534 | WP_003099002.1 | ProQ/FINO family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|