MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 99403 bp
Accession: NZ_CP104866 Location: 5522260..5621662 Organism: Pseudomonas aeruginosa strain PALA4 Replicon: chromosome
Accession: NZ_CP104866 Location: 5522260..5621662 Organism: Pseudomonas aeruginosa strain PALA4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA4_RS25655 (PALA4_05075) | 5517776..5522029 | + | 4254 | WP_003111207.1 | two-partner secretion system exoprotein TpsA4 | - |
| PALA4_RS25665 (PALA4_05076) | 5522397..5523263 | + | 867 | WP_003111785.1 | ParA family protein | - |
| PALA4_RS25670 (PALA4_05077) | 5523265..5524002 | + | 738 | WP_004347984.1 | hypothetical protein | - |
| PALA4_RS25675 (PALA4_05078) | 5523999..5524496 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| PALA4_RS25680 (PALA4_05079) | 5524549..5525220 | + | 672 | WP_071535208.1 | Lar family restriction alleviation protein | - |
| PALA4_RS25685 (PALA4_05080) | 5525220..5525921 | + | 702 | WP_021205064.1 | DUF2786 domain-containing protein | - |
| PALA4_RS25690 (PALA4_05081) | 5525918..5526625 | + | 708 | WP_003122069.1 | HNH endonuclease signature motif containing protein | - |
| PALA4_RS25695 (PALA4_05082) | 5526609..5526827 | + | 219 | WP_003122068.1 | hypothetical protein | - |
| PALA4_RS25700 (PALA4_05083) | 5526824..5528170 | + | 1347 | WP_023911889.1 | replicative DNA helicase | - |
| PALA4_RS25705 (PALA4_05084) | 5528167..5528352 | + | 186 | WP_023911888.1 | hypothetical protein | - |
| PALA4_RS25710 (PALA4_05085) | 5528342..5528869 | + | 528 | WP_023911886.1 | hypothetical protein | - |
| PALA4_RS25715 (PALA4_05086) | 5528866..5529123 | + | 258 | WP_004347980.1 | hypothetical protein | - |
| PALA4_RS25720 | 5529116..5529610 | + | 495 | WP_004347979.1 | hypothetical protein | - |
| PALA4_RS25725 (PALA4_05088) | 5529603..5529836 | + | 234 | WP_004347978.1 | hypothetical protein | - |
| PALA4_RS25730 (PALA4_05089) | 5529836..5530858 | + | 1023 | WP_023911882.1 | nucleoid-associated protein YejK | - |
| PALA4_RS25735 (PALA4_05090) | 5530855..5531745 | + | 891 | WP_003117034.1 | DNA adenine methylase | - |
| PALA4_RS25740 (PALA4_05091) | 5531766..5532035 | + | 270 | WP_003117035.1 | Arc family DNA-binding protein | - |
| PALA4_RS25745 (PALA4_05092) | 5532032..5533768 | + | 1737 | WP_023657786.1 | ParB family protein | - |
| PALA4_RS25750 (PALA4_05093) | 5533796..5534563 | + | 768 | WP_003134101.1 | DUF2857 domain-containing protein | - |
| PALA4_RS25755 (PALA4_05094) | 5534560..5535885 | + | 1326 | WP_023132182.1 | STY4528 family pathogenicity island replication protein | - |
| PALA4_RS25760 (PALA4_05095) | 5535882..5536622 | + | 741 | WP_235176243.1 | hypothetical protein | - |
| PALA4_RS25765 (PALA4_05096) | 5536779..5537507 | + | 729 | WP_031275718.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA4_RS25770 (PALA4_05097) | 5537513..5538061 | + | 549 | WP_023911877.1 | DUF3158 family protein | - |
| PALA4_RS25775 (PALA4_05098) | 5538109..5538939 | + | 831 | WP_023911875.1 | Rha family transcriptional regulator | - |
| PALA4_RS25780 (PALA4_05099) | 5538969..5539457 | + | 489 | WP_023911873.1 | single-stranded DNA-binding protein | - |
| PALA4_RS25785 | 5539714..5539881 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| PALA4_RS25790 (PALA4_05100) | 5539997..5541916 | + | 1920 | WP_031275716.1 | type I DNA topoisomerase | - |
| PALA4_RS25795 (PALA4_05101) | 5542159..5544036 | + | 1878 | WP_023911870.1 | hypothetical protein | - |
| PALA4_RS25800 (PALA4_05102) | 5544033..5546009 | + | 1977 | WP_031275715.1 | DEAD/DEAH box helicase | - |
| PALA4_RS25805 | 5546019..5546153 | + | 135 | WP_033179080.1 | hypothetical protein | - |
| PALA4_RS25810 | 5546150..5546494 | + | 345 | WP_003448665.1 | hypothetical protein | - |
| PALA4_RS25815 (PALA4_05103) | 5546565..5546855 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| PALA4_RS25820 | 5546852..5547151 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PALA4_RS25825 (PALA4_05104) | 5547352..5548476 | + | 1125 | WP_023435880.1 | hypothetical protein | VF |
| PALA4_RS25830 (PALA4_05105) | 5548476..5550185 | + | 1710 | WP_023435879.1 | hypothetical protein | VF |
| PALA4_RS25835 (PALA4_05106) | 5550189..5551514 | + | 1326 | WP_023435878.1 | type 4b pilus protein PilO2 | - |
| PALA4_RS25840 (PALA4_05107) | 5551504..5552037 | + | 534 | WP_023435877.1 | type IV pilus biogenesis protein PilP | - |
| PALA4_RS25845 (PALA4_05108) | 5552046..5553626 | + | 1581 | WP_033862986.1 | hypothetical protein | VF |
| PALA4_RS25850 (PALA4_05109) | 5553626..5554705 | + | 1080 | WP_023435875.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PALA4_RS25855 (PALA4_05110) | 5554727..5555257 | + | 531 | WP_033862987.1 | hypothetical protein | VF |
| PALA4_RS25860 (PALA4_05111) | 5555254..5556195 | + | 942 | WP_073651013.1 | ATPase, T2SS/T4P/T4SS family | - |
| PALA4_RS25865 (PALA4_05112) | 5556200..5557528 | + | 1329 | WP_033862990.1 | hypothetical protein | VF |
| PALA4_RS25870 (PALA4_05113) | 5557557..5557994 | + | 438 | WP_015503584.1 | hypothetical protein | VF |
| PALA4_RS25875 (PALA4_05114) | 5558909..5559298 | + | 390 | WP_003158173.1 | hypothetical protein | - |
| PALA4_RS25880 (PALA4_05115) | 5559373..5559549 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| PALA4_RS25885 (PALA4_05116) | 5559551..5559685 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| PALA4_RS25890 (PALA4_05117) | 5560011..5560490 | + | 480 | WP_033862993.1 | STY4534 family ICE replication protein | - |
| PALA4_RS25895 (PALA4_05118) | 5560628..5560786 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| PALA4_RS25900 (PALA4_05119) | 5560860..5561057 | + | 198 | WP_031275704.1 | hypothetical protein | - |
| PALA4_RS25905 (PALA4_05120) | 5561542..5562249 | + | 708 | WP_033862994.1 | hypothetical protein | - |
| PALA4_RS25910 (PALA4_05121) | 5562484..5562834 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| PALA4_RS25915 (PALA4_05122) | 5562891..5563502 | + | 612 | Protein_5125 | DUF3275 family protein | - |
| PALA4_RS25920 (PALA4_05123) | 5563785..5564147 | + | 363 | WP_003159706.1 | hypothetical protein | - |
| PALA4_RS25925 (PALA4_05124) | 5564215..5564469 | + | 255 | WP_252126760.1 | hypothetical protein | - |
| PALA4_RS25930 (PALA4_05125) | 5564561..5565166 | + | 606 | WP_252126761.1 | hypothetical protein | - |
| PALA4_RS25935 (PALA4_05126) | 5565196..5566641 | + | 1446 | WP_252126762.1 | DUF6094 domain-containing protein | - |
| PALA4_RS25940 (PALA4_05127) | 5566746..5567750 | + | 1005 | Protein_5130 | SNF2-related protein | - |
| PALA4_RS25945 (PALA4_05128) | 5568368..5570086 | + | 1719 | WP_003116815.1 | group II intron reverse transcriptase/maturase | - |
| PALA4_RS25950 | 5570154..5570354 | + | 201 | WP_269973769.1 | hypothetical protein | - |
| PALA4_RS25955 (PALA4_05129) | 5570780..5571583 | - | 804 | WP_013983152.1 | IS21 family transposase ISPst3 | Transposase |
| PALA4_RS25960 (PALA4_05130) | 5571576..5573075 | - | 1500 | WP_105264318.1 | IS21 family transposase ISPst3 | Transposase |
| PALA4_RS25965 (PALA4_05131) | 5573564..5575267 | + | 1704 | WP_031631519.1 | group II intron reverse transcriptase/maturase | - |
| PALA4_RS25970 (PALA4_05132) | 5575350..5576429 | + | 1080 | Protein_5136 | DEAD/DEAH box helicase | - |
| PALA4_RS25975 (PALA4_05133) | 5576531..5576965 | - | 435 | WP_169433239.1 | hypothetical protein | - |
| PALA4_RS25980 (PALA4_05134) | 5577113..5578294 | - | 1182 | WP_031632160.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PALA4_RS25985 (PALA4_05135) | 5578633..5579049 | - | 417 | WP_008567175.1 | hypothetical protein | - |
| PALA4_RS25990 (PALA4_05136) | 5579068..5580750 | - | 1683 | WP_008567178.1 | mercury(II) reductase | - |
| PALA4_RS25995 (PALA4_05137) | 5580783..5581217 | - | 435 | WP_008567179.1 | organomercurial transporter MerC | - |
| PALA4_RS26000 (PALA4_05138) | 5581230..5581505 | - | 276 | WP_008567180.1 | mercury resistance system periplasmic binding protein MerP | - |
| PALA4_RS26005 (PALA4_05139) | 5581519..5581869 | - | 351 | WP_008567181.1 | mercuric ion transporter MerT | - |
| PALA4_RS26010 (PALA4_05140) | 5581941..5582351 | + | 411 | WP_008567182.1 | IS607 family transposase ISChh1 | Transposase |
| PALA4_RS26015 | 5582725..5582897 | + | 173 | Protein_5145 | DUF4113 domain-containing protein | - |
| PALA4_RS26020 | 5582915..5583268 | - | 354 | WP_008567186.1 | hypothetical protein | - |
| PALA4_RS26025 (PALA4_05143) | 5583340..5585193 | - | 1854 | WP_010794483.1 | hypothetical protein ; Integrase | Integrase |
| PALA4_RS26030 (PALA4_05144) | 5585174..5586790 | - | 1617 | WP_023082841.1 | hypothetical protein | - |
| PALA4_RS26035 (PALA4_05145) | 5586801..5587958 | - | 1158 | WP_010794485.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PALA4_RS26040 (PALA4_05146) | 5588056..5588190 | - | 135 | WP_023104026.1 | hypothetical protein | - |
| PALA4_RS26045 (PALA4_05147) | 5588183..5588614 | - | 432 | WP_252126807.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PALA4_RS26050 (PALA4_05148) | 5588719..5589402 | + | 684 | WP_129373809.1 | SOS response-associated peptidase family protein | - |
| PALA4_RS26055 (PALA4_05149) | 5589886..5590260 | + | 375 | WP_023086531.1 | hypothetical protein | - |
| PALA4_RS26060 (PALA4_05150) | 5590283..5590486 | + | 204 | WP_023086532.1 | TrfB-related DNA-binding protein | - |
| PALA4_RS26065 | 5590836..5591228 | + | 393 | WP_025324765.1 | hypothetical protein | - |
| PALA4_RS26070 (PALA4_05151) | 5591361..5591633 | - | 273 | WP_074241171.1 | hypothetical protein | - |
| PALA4_RS26075 (PALA4_05152) | 5591851..5592540 | + | 690 | WP_049950399.1 | hypothetical protein | - |
| PALA4_RS26080 (PALA4_05153) | 5592551..5593306 | + | 756 | WP_003109383.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA4_RS26085 (PALA4_05154) | 5593291..5593872 | + | 582 | WP_015648301.1 | hypothetical protein | VF |
| PALA4_RS26090 (PALA4_05155) | 5593869..5594369 | + | 501 | WP_023129324.1 | integrating conjugative element protein | - |
| PALA4_RS26095 (PALA4_05156) | 5594378..5594647 | + | 270 | WP_003109386.1 | hypothetical protein | - |
| PALA4_RS26100 (PALA4_05157) | 5594651..5596882 | + | 2232 | WP_252126806.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA4_RS26105 (PALA4_05158) | 5596882..5597628 | + | 747 | WP_023129326.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA4_RS26110 (PALA4_05159) | 5597639..5599120 | + | 1482 | WP_023086539.1 | UvrD-helicase domain-containing protein | - |
| PALA4_RS26115 (PALA4_05160) | 5599229..5599534 | + | 306 | WP_003099832.1 | hypothetical protein | - |
| PALA4_RS26120 (PALA4_05161) | 5599628..5599966 | + | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| PALA4_RS26125 | 5599963..5600202 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA4_RS26130 (PALA4_05163) | 5600220..5600576 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA4_RS26135 (PALA4_05164) | 5600587..5600973 | + | 387 | WP_003125333.1 | TIGR03750 family conjugal transfer protein | - |
| PALA4_RS26140 (PALA4_05165) | 5600970..5601629 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA4_RS26145 (PALA4_05166) | 5601626..5602510 | + | 885 | WP_023129328.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA4_RS26150 (PALA4_05167) | 5602494..5603999 | + | 1506 | WP_252126805.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA4_RS26155 (PALA4_05168) | 5603977..5604420 | + | 444 | WP_023101461.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA4_RS26160 (PALA4_05169) | 5604420..5607368 | + | 2949 | WP_252126804.1 | conjugative transfer ATPase | - |
| PALA4_RS26165 (PALA4_05170) | 5607365..5607649 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| PALA4_RS26170 (PALA4_05171) | 5607646..5608317 | + | 672 | WP_252126803.1 | DsbA family protein | - |
| PALA4_RS26175 (PALA4_05172) | 5608455..5609888 | + | 1434 | WP_121352859.1 | ParB/Srx family N-terminal domain-containing protein | - |
| PALA4_RS26180 (PALA4_05173) | 5609957..5610838 | + | 882 | WP_023086565.1 | DNA adenine methylase | - |
| PALA4_RS26185 (PALA4_05174) | 5611022..5611240 | - | 219 | WP_121352861.1 | hypothetical protein | - |
| PALA4_RS26190 | 5611448..5611879 | + | 432 | WP_079386512.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA4_RS26195 (PALA4_05175) | 5611879..5612817 | + | 939 | WP_009875853.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA4_RS26200 (PALA4_05176) | 5612835..5614217 | + | 1383 | WP_252126826.1 | integrating conjugative element protein | - |
| PALA4_RS26205 (PALA4_05177) | 5614217..5614570 | + | 354 | WP_252126827.1 | hypothetical protein | - |
| PALA4_RS26210 (PALA4_05178) | 5614567..5616081 | + | 1515 | WP_252126828.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA4_RS26215 (PALA4_05179) | 5616549..5616821 | + | 273 | WP_023518405.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PALA4_RS26220 (PALA4_05180) | 5616825..5617175 | + | 351 | WP_058130540.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PALA4_RS26225 (PALA4_05181) | 5617297..5617914 | - | 618 | WP_252126829.1 | hypothetical protein | - |
| PALA4_RS26230 (PALA4_05182) | 5618048..5619970 | + | 1923 | WP_269973770.1 | MobH family relaxase | - |
| PALA4_RS26235 (PALA4_05183) | 5619967..5621247 | + | 1281 | WP_252126796.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PALA4_RS26255 (PALA4_05187) | 5622100..5624664 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| PALA4_RS26260 (PALA4_05188) | 5624820..5625548 | - | 729 | WP_003110429.1 | peptidoglycan editing factor PgeF | - |
| PALA4_RS26265 (PALA4_05189) | 5625545..5626507 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|