MGE detailed information
MGE type: Genomic_island MGE length: 48156 bp
Accession: NZ_CP104848 Location: 1384569..1432724 Organism: Escherichia coli strain DFK.1 Replicon: chromosome
Accession: NZ_CP104848 Location: 1384569..1432724 Organism: Escherichia coli strain DFK.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N7218_RS06865 (1380834) | 1380834..1381937 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| N7218_RS06870 (1381949) | 1381949..1383202 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| N7218_RS06880 (1383407) | 1383407..1383610 | - | 204 | Protein_1351 | integrase | - |
| N7218_RS06885 (1383756) | 1383756..1384226 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| N7218_RS06890 (1384204) | 1384204..1384362 | - | 159 | WP_071550417.1 | ash family protein | - |
| N7218_RS06895 (1384569) | 1384569..1385816 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| N7218_RS06900 (1385806) | 1385806..1387443 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| N7218_RS06905 (1387437) | 1387437..1390535 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| N7218_RS06910 (1390819) | 1390819..1391601 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| N7218_RS06915 (1391588) | 1391588..1392508 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| N7218_RS06920 (1392673) | 1392673..1393449 | - | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| N7218_RS06925 (1393657) | 1393657..1393992 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| N7218_RS06930 (1394219) | 1394219..1394377 | - | 159 | Protein_1361 | integrase | - |
| N7218_RS06935 (1394426) | 1394426..1394611 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| N7218_RS06940 (1394826) | 1394826..1395440 | + | 615 | WP_001019923.1 | YagU family protein | - |
| N7218_RS06945 (1395511) | 1395511..1395677 | + | 167 | Protein_1364 | tail fiber assembly protein | - |
| N7218_RS06950 (1395689) | 1395689..1396018 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| N7218_RS06955 (1396325) | 1396325..1397035 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| N7218_RS06960 (1397004) | 1397004..1398647 | - | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| N7218_RS06965 (1398637) | 1398637..1401162 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| N7218_RS06970 (1401188) | 1401188..1401856 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| N7218_RS06975 (1401913) | 1401913..1402500 | - | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| N7218_RS06980 (1402575) | 1402575..1403117 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| N7218_RS06985 (1403941) | 1403941..1404131 | + | 191 | Protein_1372 | hypothetical protein | - |
| N7218_RS06990 (1404201) | 1404201..1404341 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| N7218_RS06995 (1404341) | 1404341..1404604 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| N7218_RS07000 (1404969) | 1404969..1405070 | - | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| N7218_RS07005 (1405543) | 1405543..1406685 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| N7218_RS07010 (1406858) | 1406858..1407778 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| N7218_RS07015 (1407935) | 1407935..1408861 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| N7218_RS07020 (1409061) | 1409061..1409954 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| N7218_RS07025 (1409985) | 1409985..1410974 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| N7218_RS07030 (1411001) | 1411001..1411852 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| N7218_RS07035 (1412418) | 1412418..1416665 | + | 4248 | WP_000092552.1 | hypothetical protein | VF |
| N7218_RS07040 (1416790) | 1416790..1417647 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| N7218_RS07045 (1417895) | 1417895..1418764 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| N7218_RS07050 (1418924) | 1418924..1419517 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| N7218_RS07055 (1419529) | 1419529..1419765 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| N7218_RS07060 (1419874) | 1419874..1421199 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| N7218_RS07065 (1421426) | 1421426..1422280 | + | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| N7218_RS07070 (1422806) | 1422806..1423525 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| N7218_RS07075 (1423536) | 1423536..1424963 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| N7218_RS07080 (1424956) | 1424956..1425651 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| N7218_RS07085 (1425894) | 1425894..1426562 | - | 669 | WP_001005267.1 | protein YkgH | - |
| N7218_RS07090 (1426746) | 1426746..1429037 | - | 2292 | WP_000798065.1 | outer membrane autotransporter HyxB | - |
| N7218_RS07095 (1429079) | 1429079..1429840 | - | 762 | WP_001213045.1 | protein HyxA | - |
| N7218_RS07100 (1429994) | 1429994..1430788 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| N7218_RS07105 (1431118) | 1431118..1431681 | - | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| N7218_RS07110 (1432766) | 1432766..1434436 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| N7218_RS07115 (1434450) | 1434450..1435922 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| N7218_RS07120 (1435936) | 1435936..1436523 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|