MGE detailed information
MGE type: IScluster/Tn MGE length: 7754 bp
Accession: NZ_CP104848 Location: 1139887..1147640 Organism: Escherichia coli strain DFK.1 Replicon: chromosome
Accession: NZ_CP104848 Location: 1139887..1147640 Organism: Escherichia coli strain DFK.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N7218_RS05630 (1135582) | 1135582..1136427 | + | 846 | WP_001295762.1 | arabinose operon transcriptional regulator AraC | - |
| N7218_RS05635 (1136651) | 1136651..1137883 | + | 1233 | WP_000285500.1 | ribokinase | - |
| N7218_RS05640 (1137909) | 1137909..1138832 | + | 924 | WP_000848327.1 | dihydrodipicolinate synthase family protein | - |
| N7218_RS05645 (1138887) | 1138887..1139858 | + | 972 | WP_260654129.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| N7218_RS05650 (1139887) | 1139887..1140584 | + | 698 | WP_223293341.1 | IS1 family transposase IS1R | Transposase |
| N7218_RS05655 (1140600) | 1140600..1140929 | + | 330 | Protein_1114 | TOBE domain-containing protein | - |
| N7218_RS05660 (1141038) | 1141038..1141970 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| N7218_RS05665 (1141957) | 1141957..1143360 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| N7218_RS05670 (1143604) | 1143604..1144584 | + | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| N7218_RS05675 (1144794) | 1144794..1145129 | + | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| N7218_RS05680 (1145079) | 1145079..1145492 | - | 414 | Protein_1119 | IS3 family transposase ISLad1 | Transposase |
| N7218_RS05685 (1145497) | 1145497..1145775 | - | 279 | Protein_1120 | pdcB | - |
| N7218_RS05690 (1145803) | 1145803..1145982 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| N7218_RS05695 (1145987) | 1145987..1146367 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| N7218_RS05700 (1146367) | 1146367..1146588 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N7218_RS05705 (1146771) | 1146771..1146887 | + | 117 | Protein_1124 | type I restriction endonuclease subunit M | - |
| N7218_RS05710 (1146943) | 1146943..1147640 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| N7218_RS05715 (1147722) | 1147722..1148159 | + | 438 | WP_001220296.1 | tripartite tricarboxylate transporter TctB family protein | - |
| N7218_RS05720 (1148169) | 1148169..1149656 | + | 1488 | WP_000353207.1 | tripartite tricarboxylate transporter permease | - |
| N7218_RS05725 (1149840) | 1149840..1150604 | + | 765 | WP_001148411.1 | DedA family protein | - |
| N7218_RS05730 (1150718) | 1150718..1151416 | - | 699 | WP_000916271.1 | thiamine ABC transporter ATP-binding protein ThiQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|