MGE detailed information
MGE type: Genomic_island MGE length: 48156 bp
Accession: NZ_CP104846 Location: 1265248..1313403 Organism: Escherichia coli strain DFS.1 Replicon: chromosome
Accession: NZ_CP104846 Location: 1265248..1313403 Organism: Escherichia coli strain DFS.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N7219_RS06220 (1261513) | 1261513..1262616 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| N7219_RS06225 (1262628) | 1262628..1263881 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| N7219_RS06235 (1264086) | 1264086..1264289 | - | 204 | Protein_1222 | integrase | - |
| N7219_RS06240 (1264435) | 1264435..1264905 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| N7219_RS06245 (1264883) | 1264883..1265041 | - | 159 | WP_071550417.1 | ash family protein | - |
| N7219_RS06250 (1265248) | 1265248..1266495 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| N7219_RS06255 (1266485) | 1266485..1268122 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| N7219_RS06260 (1268116) | 1268116..1271214 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| N7219_RS06265 (1271498) | 1271498..1272280 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| N7219_RS06270 (1272267) | 1272267..1273187 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| N7219_RS06275 (1273352) | 1273352..1274128 | - | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| N7219_RS06280 (1274336) | 1274336..1274671 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| N7219_RS06285 (1274898) | 1274898..1275056 | - | 159 | Protein_1232 | integrase | - |
| N7219_RS06290 (1275105) | 1275105..1275290 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| N7219_RS06295 (1275505) | 1275505..1276119 | + | 615 | WP_001019923.1 | YagU family protein | - |
| N7219_RS06300 (1276190) | 1276190..1276356 | + | 167 | Protein_1235 | tail fiber assembly protein | - |
| N7219_RS06305 (1276368) | 1276368..1276697 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| N7219_RS06310 (1277004) | 1277004..1277714 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| N7219_RS06315 (1277683) | 1277683..1279326 | - | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| N7219_RS06320 (1279316) | 1279316..1281841 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| N7219_RS06325 (1281867) | 1281867..1282535 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| N7219_RS06330 (1282592) | 1282592..1283179 | - | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| N7219_RS06335 (1283254) | 1283254..1283796 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| N7219_RS06340 (1284620) | 1284620..1284810 | + | 191 | Protein_1243 | hypothetical protein | - |
| N7219_RS06345 (1284880) | 1284880..1285020 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| N7219_RS06350 (1285020) | 1285020..1285283 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| N7219_RS06355 (1285648) | 1285648..1285749 | - | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| N7219_RS06360 (1286222) | 1286222..1287364 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| N7219_RS06365 (1287537) | 1287537..1288457 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| N7219_RS06370 (1288614) | 1288614..1289540 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| N7219_RS06375 (1289740) | 1289740..1290633 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| N7219_RS06380 (1290664) | 1290664..1291653 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| N7219_RS06385 (1291680) | 1291680..1292531 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| N7219_RS06390 (1293097) | 1293097..1297344 | + | 4248 | WP_000092552.1 | hypothetical protein | VF |
| N7219_RS06395 (1297469) | 1297469..1298326 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| N7219_RS06400 (1298574) | 1298574..1299443 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| N7219_RS06405 (1299603) | 1299603..1300196 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| N7219_RS06410 (1300208) | 1300208..1300444 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| N7219_RS06415 (1300553) | 1300553..1301878 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| N7219_RS06420 (1302105) | 1302105..1302959 | + | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| N7219_RS06425 (1303485) | 1303485..1304204 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| N7219_RS06430 (1304215) | 1304215..1305642 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| N7219_RS06435 (1305635) | 1305635..1306330 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| N7219_RS06440 (1306573) | 1306573..1307241 | - | 669 | WP_001005267.1 | protein YkgH | - |
| N7219_RS06445 (1307425) | 1307425..1309716 | - | 2292 | WP_000798065.1 | outer membrane autotransporter HyxB | - |
| N7219_RS06450 (1309758) | 1309758..1310519 | - | 762 | WP_001213045.1 | protein HyxA | - |
| N7219_RS06455 (1310673) | 1310673..1311467 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| N7219_RS06460 (1311797) | 1311797..1312360 | - | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| N7219_RS06465 (1313445) | 1313445..1315115 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| N7219_RS06470 (1315129) | 1315129..1316601 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| N7219_RS06475 (1316615) | 1316615..1317202 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|