MGE detailed information
MGE type: IScluster/Tn MGE length: 7754 bp
Accession: NZ_CP104846 Location: 1020566..1028319 Organism: Escherichia coli strain DFS.1 Replicon: chromosome
Accession: NZ_CP104846 Location: 1020566..1028319 Organism: Escherichia coli strain DFS.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N7219_RS04985 (1016261) | 1016261..1017106 | + | 846 | WP_001295762.1 | arabinose operon transcriptional regulator AraC | - |
| N7219_RS04990 (1017330) | 1017330..1018562 | + | 1233 | WP_000285500.1 | ribokinase | - |
| N7219_RS04995 (1018588) | 1018588..1019511 | + | 924 | WP_000848327.1 | dihydrodipicolinate synthase family protein | - |
| N7219_RS05000 (1019566) | 1019566..1020537 | + | 972 | WP_260654129.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| N7219_RS05005 (1020566) | 1020566..1021263 | + | 698 | WP_223293341.1 | IS1 family transposase IS1R | Transposase |
| N7219_RS05010 (1021279) | 1021279..1021608 | + | 330 | Protein_985 | TOBE domain-containing protein | - |
| N7219_RS05015 (1021717) | 1021717..1022649 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| N7219_RS05020 (1022636) | 1022636..1024039 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| N7219_RS05025 (1024283) | 1024283..1025263 | + | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| N7219_RS05030 (1025473) | 1025473..1025808 | + | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| N7219_RS05035 (1025758) | 1025758..1026171 | - | 414 | Protein_990 | IS3 family transposase ISLad1 | Transposase |
| N7219_RS05040 (1026176) | 1026176..1026454 | - | 279 | Protein_991 | pdcB | - |
| N7219_RS05045 (1026482) | 1026482..1026661 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| N7219_RS05050 (1026666) | 1026666..1027046 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| N7219_RS05055 (1027046) | 1027046..1027267 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N7219_RS05060 (1027450) | 1027450..1027566 | + | 117 | Protein_995 | type I restriction endonuclease subunit M | - |
| N7219_RS05065 (1027622) | 1027622..1028319 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| N7219_RS05070 (1028401) | 1028401..1028838 | + | 438 | WP_001220296.1 | tripartite tricarboxylate transporter TctB family protein | - |
| N7219_RS05075 (1028848) | 1028848..1030335 | + | 1488 | WP_000353207.1 | tripartite tricarboxylate transporter permease | - |
| N7219_RS05080 (1030519) | 1030519..1031283 | + | 765 | WP_001148411.1 | DedA family protein | - |
| N7219_RS05085 (1031397) | 1031397..1032095 | - | 699 | WP_000916271.1 | thiamine ABC transporter ATP-binding protein ThiQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|