MGE detailed information
MGE type: Conjugative plasmid MGE length: 140749 bp
Accession: NZ_CP104845 Location: 1..140749 Organism: Escherichia coli strain DFL.5 Replicon: plasmid unnamed2
Accession: NZ_CP104845 Location: 1..140749 Organism: Escherichia coli strain DFL.5 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N7217_RS25275 (767) | 767..1558 | - | 792 | WP_261629298.1 | IS6 family transposase IS6100 | Transposase |
| N7217_RS25280 (1676) | 1676..1741 | - | 66 | Protein_2 | EAL domain-containing protein | - |
| N7217_RS25285 (1785) | 1785..2091 | - | 307 | Protein_3 | PadR family transcriptional regulator | - |
| N7217_RS25290 (2102) | 2102..3309 | - | 1208 | Protein_4 | chromate efflux transporter | - |
| N7217_RS25295 (3797) | 3797..4638 | - | 842 | Protein_5 | hypothetical protein | ARG |
| N7217_RS25300 (4632) | 4632..4862 | - | 231 | WP_261629299.1 | SMR family transporter | - |
| N7217_RS25305 (4768) | 4768..5016 | - | 249 | WP_261629300.1 | SMR family transporter | - |
| N7217_RS25310 (5096) | 5096..5935 | - | 840 | Protein_8 | AadA family aminoglycoside 3''-O-nucleotidyltransferase | - |
| N7217_RS25315 (5993) | 5993..6232 | - | 240 | WP_261629301.1 | DUF1010 domain-containing protein | - |
| N7217_RS25320 (6343) | 6343..6840 | - | 498 | WP_001083725.1 | IS1595 family transposase ISSsu9 | ARG |
| N7217_RS25325 (6985) | 6985..7998 | + | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| N7217_RS25330 (8201) | 8201..8458 | + | 258 | Protein_12 | DUF3330 domain-containing protein | - |
| N7217_RS25335 (8512) | 8512..9216 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N7217_RS25340 (9382) | 9382..10235 | + | 854 | Protein_14 | hypothetical protein | ARG |
| N7217_RS25345 (10248) | 10248..10790 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| N7217_RS25350 (11272) | 11272..11463 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| N7217_RS25355 (11487) | 11487..11714 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| N7217_RS25360 (11765) | 11765..12901 | + | 1137 | WP_000080861.1 | DUF3883 domain-containing protein | - |
| N7217_RS25365 (13016) | 13016..14386 | + | 1371 | WP_000971921.1 | IS1182 family transposase ISCfr1 | Transposase |
| N7217_RS25370 (15207) | 15207..16067 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| N7217_RS25375 (16217) | 16217..16315 | - | 99 | Protein_21 | IS1 family transposase | - |
| N7217_RS25380 (16344) | 16344..17654 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| N7217_RS25385 (17939) | 17939..18341 | - | 403 | Protein_23 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| N7217_RS25390 (18274) | 18274..18531 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| N7217_RS25395 (18624) | 18624..19277 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| N7217_RS25400 (19375) | 19375..19515 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| N7217_RS25405 (20208) | 20208..21065 | - | 858 | WP_021523469.1 | incFII family plasmid replication initiator RepA | - |
| N7217_RS25410 (21084) | 21084..21264 | - | 181 | Protein_28 | protein CopA/IncA | - |
| N7217_RS25415 (21368) | 21368..21625 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| N7217_RS25420 (21865) | 21865..22455 | - | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| N7217_RS25425 (22494) | 22494..22703 | - | 210 | WP_001309247.1 | hemolysin expression modulator Hha | - |
| N7217_RS25430 (22749) | 22749..23210 | - | 462 | WP_001233842.1 | thermonuclease family protein | - |
| N7217_RS25435 (23455) | 23455..23667 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| N7217_RS25440 (23796) | 23796..24356 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| N7217_RS25445 (24459) | 24459..25319 | - | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| N7217_RS25450 (25378) | 25378..25887 | - | 510 | Protein_36 | type-F conjugative transfer system pilin acetylase TraX | - |
| N7217_RS25455 (25943) | 25943..27157 | + | 1215 | Protein_37 | IS3 family transposase | - |
| N7217_RS25460 (27633) | 27633..29105 | - | 1473 | WP_000621194.1 | ATP-binding protein | - |
| N7217_RS25465 (29102) | 29102..29824 | - | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
| N7217_RS25470 (29966) | 29966..30565 | + | 600 | WP_001177183.1 | cytochrome b/b6 domain-containing protein | - |
| N7217_RS25475 (30576) | 30576..31346 | + | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| N7217_RS25480 (31376) | 31376..31606 | + | 231 | WP_000738204.1 | pentapeptide MXKDX repeat protein | - |
| N7217_RS25485 (31777) | 31777..31860 | - | 84 | Protein_43 | transposase | - |
| N7217_RS25490 (31942) | 31942..32346 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| N7217_RS25495 (32343) | 32343..32690 | + | 348 | WP_021517412.1 | IS66 family transposase ISKpn24 | Transposase |
| N7217_RS25500 (32739) | 32739..34277 | + | 1539 | WP_021517411.1 | IS66 family transposase ISEc22 | Transposase |
| N7217_RS25505 (34340) | 34340..35131 | - | 792 | WP_021517410.1 | DUF4198 domain-containing protein | - |
| N7217_RS25510 (35138) | 35138..37108 | - | 1971 | WP_021517409.1 | Hemin receptor | VF |
| N7217_RS25515 (37390) | 37390..37814 | + | 425 | Protein_49 | IS3 family transposase IS2 | Transposase |
| N7217_RS25520 (38464) | 38464..38616 | + | 153 | WP_224163185.1 | adhesin biosynthesis transcription regulatory family protein | - |
| N7217_RS25525 (39062) | 39062..39237 | + | 176 | Protein_51 | IS3 family transposase | - |
| N7217_RS25530 (39463) | 39463..40632 | - | 1170 | WP_001072359.1 | hypothetical protein | - |
| N7217_RS25535 (40999) | 40999..41187 | + | 189 | WP_023150877.1 | hypothetical protein | - |
| N7217_RS25540 (41369) | 41369..42066 | + | 698 | WP_231528155.1 | IS1 family transposase IS1X2 | Transposase |
| N7217_RS25545 (42166) | 42166..42513 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| N7217_RS25550 (42533) | 42533..43123 | - | 591 | WP_021517407.1 | hypothetical protein | - |
| N7217_RS25555 (43120) | 43120..43380 | - | 261 | WP_021517406.1 | hypothetical protein | - |
| N7217_RS25560 (43479) | 43479..44218 | + | 740 | Protein_58 | IS3 family transposase IS629 | Transposase |
| N7217_RS25565 (44891) | 44891..46387 | + | 1497 | Protein_59 | group II intron reverse transcriptase/maturase | - |
| N7217_RS25570 (46490) | 46490..46963 | + | 474 | Protein_60 | IS3 family transposase IS629 | Transposase |
| N7217_RS25575 (47363) | 47363..48568 | + | 1206 | WP_001442122.1 | Plasmid partition protein A | VF |
| N7217_RS25580 (48565) | 48565..49536 | + | 972 | WP_001233385.1 | ParB family protein | - |
| N7217_RS25585 (49673) | 49673..50818 | - | 1146 | Protein_63 | translesion error-prone DNA polymerase V subunit UmuC | - |
| N7217_RS25590 (50944) | 50944..51879 | + | 936 | WP_021517404.1 | IS91 family transposase ISMno24 | Transposase |
| N7217_RS25595 (51876) | 51876..52787 | + | 912 | WP_021517403.1 | hypothetical protein | - |
| N7217_RS25600 (52864) | 52864..54003 | + | 1140 | WP_023150879.1 | tyrosine-type recombinase/integrase | - |
| N7217_RS25610 (55346) | 55346..55843 | + | 498 | WP_050575716.1 | single-stranded DNA-binding protein | - |
| N7217_RS25615 (55906) | 55906..56139 | + | 234 | WP_021517399.1 | DUF905 domain-containing protein | - |
| N7217_RS25620 (56198) | 56198..58156 | + | 1959 | WP_021517398.1 | ParB/RepB/Spo0J family partition protein | - |
| N7217_RS25625 (58211) | 58211..58645 | + | 435 | WP_021517397.1 | conjugation system SOS inhibitor PsiB | - |
| N7217_RS25630 (58642) | 58642..59361 | + | 720 | Protein_72 | plasmid SOS inhibition protein A | - |
| - (59372) | 59372..59583 | + | 212 | NuclAT_0 | - | - |
| - (59372) | 59372..59583 | + | 212 | NuclAT_0 | - | - |
| - (59372) | 59372..59583 | + | 212 | NuclAT_0 | - | - |
| - (59372) | 59372..59583 | + | 212 | NuclAT_0 | - | - |
| N7217_RS25635 (59617) | 59617..59730 | + | 114 | Protein_73 | DUF5431 family protein | - |
| N7217_RS25640 (59678) | 59678..59797 | + | 120 | WP_227898123.1 | Hok/Gef family protein | - |
| N7217_RS25645 (60098) | 60098..60365 | - | 268 | Protein_75 | hypothetical protein | - |
| N7217_RS25650 (60420) | 60420..60716 | + | 297 | WP_021517395.1 | hypothetical protein | - |
| N7217_RS25655 (60827) | 60827..61648 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| N7217_RS25660 (61945) | 61945..62535 | - | 591 | WP_231528153.1 | hypothetical protein | VF |
| N7217_RS25665 (62870) | 62870..63253 | + | 384 | WP_021517393.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| N7217_RS25670 (63444) | 63444..64097 | + | 654 | WP_021517392.1 | hypothetical protein | - |
| N7217_RS25675 (64222) | 64222..64449 | + | 228 | WP_000089265.1 | conjugal transfer relaxosome protein TraY | - |
| N7217_RS25680 (64482) | 64482..64844 | + | 363 | WP_021517391.1 | type IV conjugative transfer system pilin TraA | - |
| N7217_RS25685 (64859) | 64859..65170 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| N7217_RS25690 (65192) | 65192..65758 | + | 567 | WP_000399801.1 | type IV conjugative transfer system protein TraE | - |
| N7217_RS25695 (65745) | 65745..65918 | + | 174 | Protein_85 | hypothetical protein | - |
| N7217_RS25700 (66101) | 66101..66358 | + | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| N7217_RS25705 (66351) | 66351..67094 | + | 744 | WP_021517378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| N7217_RS25710 (67108) | 67108..67449 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| N7217_RS25715 (67430) | 67430..67765 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| N7217_RS25720 (67846) | 67846..68130 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| N7217_RS25725 (68117) | 68117..68662 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| N7217_RS25730 (68592) | 68592..68940 | + | 349 | Protein_92 | P-type conjugative transfer protein TrbJ | - |
| N7217_RS25735 (68921) | 68921..69313 | + | 393 | WP_021517377.1 | F-type conjugal transfer protein TrbF | - |
| N7217_RS25740 (69300) | 69300..70385 | + | 1086 | Protein_94 | conjugal transfer protein TraH | - |
| N7217_RS25745 (70374) | 70374..72935 | + | 2562 | Protein_95 | conjugal transfer mating pair stabilization protein TraG | - |
| N7217_RS25750 (72950) | 72950..73453 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| N7217_RS25755 (73485) | 73485..74216 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| N7217_RS25760 (74419) | 74419..75198 | + | 780 | WP_021517375.1 | hypothetical protein | - |
| N7217_RS25765 (75195) | 75195..77357 | + | 2163 | WP_196121223.1 | type IV conjugative transfer system coupling protein TraD | - |
| N7217_RS25770 (77357) | 77357..82627 | + | 5271 | WP_196121222.1 | Multifunctional conjugation protein TraI | Relaxase |
| N7217_RS25775 (82647) | 82647..82886 | + | 240 | Protein_101 | TraX family protein | - |
| N7217_RS25785 (84281) | 84281..85087 | - | 807 | WP_021517370.1 | site-specific integrase | - |
| N7217_RS25790 (85088) | 85088..85393 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| N7217_RS25795 (85395) | 85395..85613 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| N7217_RS25800 (86241) | 86241..86471 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N7217_RS25805 (86468) | 86468..86884 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N7217_RS25810 (86959) | 86959..88524 | + | 1566 | WP_021517369.1 | AAA family ATPase | - |
| N7217_RS25815 (88509) | 88509..89531 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| N7217_RS25825 (90712) | 90712..92913 | - | 2202 | WP_260698626.1 | Ferric aerobactin receptor | VF |
| N7217_RS25830 (92939) | 92939..94272 | - | 1334 | Protein_112 | L-lysine N6-monooxygenase | VF |
| N7217_RS25835 (94269) | 94269..96011 | - | 1743 | WP_021517443.1 | Aerobactin synthase | VF |
| N7217_RS25840 (96011) | 96011..96958 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| N7217_RS25845 (96959) | 96959..98683 | - | 1725 | WP_063269228.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| N7217_RS25850 (98819) | 98819..100012 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| N7217_RS25855 (100329) | 100329..101491 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| N7217_RS25860 (101523) | 101523..102648 | + | 1126 | Protein_118 | transposase | - |
| N7217_RS25865 (102882) | 102882..103739 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| N7217_RS25870 (103736) | 103736..104593 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| N7217_RS25875 (104590) | 104590..105417 | - | 828 | WP_000983710.1 | Manganese transport system ATP-binding protein MntB | VF |
| N7217_RS25880 (105417) | 105417..106331 | - | 915 | WP_000949005.1 | putative periplasmic iron-binding protein | VF |
| N7217_RS25885 (106687) | 106687..107384 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| N7217_RS25890 (107565) | 107565..108078 | - | 514 | Protein_124 | DUF4113 domain-containing protein | - |
| N7217_RS25895 (108139) | 108139..108243 | - | 105 | Protein_125 | AAA family ATPase | - |
| N7217_RS25900 (108245) | 108245..108568 | - | 324 | Protein_126 | IS21 family transposase IS21 | Transposase |
| N7217_RS25905 (109314) | 109314..110291 | + | 978 | WP_021517434.1 | RepB family plasmid replication initiator protein | - |
| N7217_RS25910 (110570) | 110570..111310 | - | 741 | WP_021517433.1 | IS91 family transposase ISMno23 | Transposase |
| N7217_RS25920 (112502) | 112502..112759 | - | 258 | WP_032143372.1 | hypothetical protein | VF |
| N7217_RS25925 (113561) | 113561..113866 | + | 306 | WP_001545784.1 | Major pilu subunit operon regulatory protein PapB | VF |
| N7217_RS25930 (114094) | 114094..114891 | + | 798 | WP_021517431.1 | Chaperone protein caf1M | VF |
| N7217_RS25935 (114931) | 114931..117513 | + | 2583 | WP_260673407.1 | F1 capsule-anchoring protein | VF |
| N7217_RS25940 (117529) | 117529..117972 | + | 444 | WP_001539577.1 | Protein AfaD | VF |
| N7217_RS25945 (118351) | 118351..118524 | + | 174 | WP_000527471.1 | hypothetical protein | VF |
| N7217_RS25950 (118726) | 118726..119208 | + | 483 | WP_063269203.1 | Dr family adhesin structural subunit DraE | - |
| N7217_RS25960 (121110) | 121110..121337 | - | 228 | Protein_138 | IS21 family transposase ISEc12 | Transposase |
| N7217_RS25965 (121352) | 121352..122893 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| N7217_RS25970 (123088) | 123088..123237 | + | 150 | Protein_140 | IS1 family transposase | - |
| N7217_RS25975 (123356) | 123356..123865 | + | 510 | WP_021517425.1 | conjugal transfer entry exclusion protein TraS | - |
| N7217_RS25980 (123879) | 123879..124610 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| N7217_RS25985 (124863) | 124863..125418 | + | 556 | Protein_143 | conjugal transfer protein TraD | - |
| N7217_RS25990 (125482) | 125482..126186 | + | 705 | WP_021517422.1 | IS6 family transposase IS26 | Transposase |
| N7217_RS25995 (126268) | 126268..126438 | + | 171 | Protein_145 | DsbA family protein | - |
| N7217_RS26000 (126428) | 126428..126934 | + | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| N7217_RS26005 (127171) | 127171..127932 | + | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| N7217_RS26010 (128279) | 128279..130165 | + | 1887 | WP_001332815.1 | FTR1 family protein | - |
| N7217_RS26015 (130206) | 130206..130733 | + | 528 | WP_000178050.1 | iron transporter | - |
| N7217_RS26020 (130837) | 130837..132216 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| N7217_RS26025 (132219) | 132219..133502 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| N7217_RS26030 (133492) | 133492..134622 | + | 1131 | WP_000729219.1 | ABC transporter permease | - |
| N7217_RS26035 (134627) | 134627..135322 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| N7217_RS26040 (135309) | 135309..135794 | + | 486 | WP_001554949.1 | TlpA disulfide reductase family protein | - |
| N7217_RS26045 (135819) | 135819..136304 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| N7217_RS26050 (136426) | 136426..137058 | + | 633 | Protein_156 | histidine-type phosphatase | - |
| N7217_RS26055 (137208) | 137208..137423 | - | 216 | Protein_157 | transposase | - |
| N7217_RS26060 (137487) | 137487..138191 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N7217_RS26065 (138313) | 138313..139227 | + | 915 | WP_023063803.1 | hypothetical protein | ARG |
| N7217_RS26070 (139224) | 139224..140462 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|