MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 97747 bp
Accession: NZ_CP104835 Location: 1237298..1335044 Organism: Achromobacter xylosoxidans strain 2021CK-01139 Replicon: chromosome
Accession: NZ_CP104835 Location: 1237298..1335044 Organism: Achromobacter xylosoxidans strain 2021CK-01139 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4T34_RS05895 (N4T34_05900) | 1232748..1233503 | - | 756 | WP_006389025.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| N4T34_RS05900 (N4T34_05905) | 1233500..1234081 | - | 582 | WP_006389026.1 | NUDIX hydrolase | - |
| N4T34_RS05905 (N4T34_05910) | 1234092..1235024 | - | 933 | WP_020924967.1 | LysR family transcriptional regulator | - |
| N4T34_RS05910 (N4T34_05915) | 1235148..1235549 | + | 402 | WP_006389028.1 | DoxX family protein | - |
| N4T34_RS05915 (N4T34_05920) | 1235646..1236098 | + | 453 | WP_006389029.1 | nuclear transport factor 2 family protein | - |
| N4T34_RS05920 (N4T34_05925) | 1236141..1236731 | - | 591 | WP_054480724.1 | DUF2946 family protein | - |
| N4T34_RS05925 (N4T34_05930) | 1236734..1237069 | - | 336 | WP_045953347.1 | hypothetical protein | - |
| N4T34_RS05935 (N4T34_05940) | 1237704..1238204 | - | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| N4T34_RS05940 (N4T34_05945) | 1238655..1239402 | + | 748 | Protein_1171 | hypothetical protein | - |
| N4T34_RS05945 (N4T34_05950) | 1239521..1239733 | + | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| N4T34_RS05950 (N4T34_05955) | 1239776..1240651 | + | 876 | WP_003098988.1 | Sporulation initiation inhibitor protein Soj | VF |
| N4T34_RS05955 (N4T34_05960) | 1240635..1240904 | + | 270 | WP_003050422.1 | hypothetical protein | - |
| N4T34_RS05960 (N4T34_05965) | 1240897..1242576 | + | 1680 | WP_003098985.1 | ParB family protein | - |
| N4T34_RS05965 (N4T34_05970) | 1242591..1243151 | + | 561 | WP_003090097.1 | DUF2857 domain-containing protein | - |
| N4T34_RS05970 (N4T34_05975) | 1243155..1244393 | + | 1239 | WP_005408896.1 | STY4528 family pathogenicity island replication protein | - |
| N4T34_RS05975 (N4T34_05980) | 1244823..1245614 | + | 792 | WP_003098981.1 | TIGR03761 family integrating conjugative element protein | - |
| N4T34_RS05980 (N4T34_05985) | 1245611..1246138 | + | 528 | WP_003098978.1 | DUF3158 family protein | - |
| N4T34_RS05985 (N4T34_05990) | 1246212..1246652 | + | 441 | WP_003098976.1 | single-stranded DNA-binding protein | - |
| N4T34_RS05990 (N4T34_05995) | 1246936..1248966 | + | 2031 | WP_003098974.1 | DNA topoisomerase III | - |
| N4T34_RS05995 (N4T34_06000) | 1249690..1250325 | - | 636 | WP_003098972.1 | cation transporter | - |
| N4T34_RS06000 (N4T34_06005) | 1250743..1250946 | + | 204 | WP_023657334.1 | hypothetical protein | - |
| N4T34_RS06005 (N4T34_06010) | 1250971..1251333 | + | 363 | WP_196588568.1 | DUF3703 domain-containing protein | - |
| N4T34_RS06010 (N4T34_06015) | 1251401..1251799 | - | 399 | WP_003098965.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| N4T34_RS06015 (N4T34_06020) | 1251891..1254803 | + | 2913 | WP_003098961.1 | heavy metal translocating P-type ATPase | - |
| N4T34_RS06020 (N4T34_06025) | 1254807..1255307 | + | 501 | WP_003098955.1 | signal peptidase II | - |
| N4T34_RS06025 (N4T34_06030) | 1255644..1255955 | + | 312 | WP_003108988.1 | hypothetical protein | - |
| N4T34_RS06030 (N4T34_06035) | 1256254..1256505 | + | 252 | WP_005408894.1 | hypothetical protein | - |
| N4T34_RS06035 (N4T34_06040) | 1256527..1256919 | + | 393 | WP_003098949.1 | hypothetical protein | - |
| N4T34_RS06040 (N4T34_06045) | 1257133..1257870 | + | 738 | WP_003098947.1 | hypothetical protein | - |
| N4T34_RS06045 (N4T34_06050) | 1257967..1258245 | + | 279 | WP_003098943.1 | hypothetical protein | - |
| N4T34_RS06050 (N4T34_06055) | 1258534..1259358 | + | 825 | WP_003098941.1 | hypothetical protein | - |
| N4T34_RS06055 (N4T34_06060) | 1259620..1260027 | - | 408 | WP_003098939.1 | Hg(II)-responsive transcriptional regulator | - |
| N4T34_RS06060 (N4T34_06065) | 1260099..1260449 | + | 351 | WP_003098936.1 | mercuric ion transporter MerT | - |
| N4T34_RS06065 (N4T34_06070) | 1260462..1260767 | + | 306 | WP_003098934.1 | mercury resistance system periplasmic binding protein MerP | - |
| N4T34_RS06070 (N4T34_06075) | 1260778..1262466 | + | 1689 | WP_003098932.1 | mercury(II) reductase | - |
| N4T34_RS06075 (N4T34_06080) | 1262491..1263482 | + | 992 | Protein_1198 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| N4T34_RS06080 (N4T34_06085) | 1263516..1263812 | + | 297 | Protein_1199 | DUF3085 domain-containing protein | - |
| N4T34_RS06085 (N4T34_06090) | 1263954..1264404 | + | 451 | Protein_1200 | hypothetical protein | - |
| N4T34_RS06090 (N4T34_06095) | 1264715..1265620 | + | 906 | WP_003098919.1 | DUF3577 domain-containing protein | - |
| N4T34_RS06095 (N4T34_06100) | 1265766..1266593 | + | 828 | WP_003098915.1 | DUF932 domain-containing protein | - |
| N4T34_RS06100 (N4T34_06105) | 1266688..1267377 | + | 690 | WP_003098913.1 | DUF3275 family protein | - |
| N4T34_RS06105 (N4T34_06110) | 1267472..1267810 | + | 339 | Protein_1204 | hypothetical protein | - |
| N4T34_RS06110 (N4T34_06115) | 1267917..1268324 | + | 408 | WP_003098908.1 | hypothetical protein | - |
| N4T34_RS06115 (N4T34_06120) | 1268341..1268601 | + | 261 | WP_003098905.1 | hypothetical protein | - |
| N4T34_RS06120 (N4T34_06125) | 1268678..1269325 | + | 648 | WP_003098901.1 | hypothetical protein | - |
| N4T34_RS06125 (N4T34_06130) | 1269390..1270499 | + | 1110 | WP_003098899.1 | DUF6094 domain-containing protein | - |
| N4T34_RS06130 (N4T34_06135) | 1270550..1270870 | + | 321 | WP_003098896.1 | hypothetical protein | - |
| N4T34_RS06135 (N4T34_06140) | 1270960..1271265 | + | 306 | WP_003098895.1 | hypothetical protein | - |
| N4T34_RS06140 (N4T34_06145) | 1271402..1273681 | + | 2280 | WP_003098893.1 | helicase-related protein | - |
| N4T34_RS06145 (N4T34_06150) | 1273820..1274419 | + | 600 | WP_003098890.1 | hypothetical protein | VF |
| N4T34_RS06150 (N4T34_06155) | 1274416..1275060 | + | 645 | WP_003098888.1 | hypothetical protein | - |
| N4T34_RS06155 (N4T34_06160) | 1275073..1275810 | + | 738 | WP_003098886.1 | TIGR03759 family integrating conjugative element protein | - |
| N4T34_RS06160 (N4T34_06165) | 1275792..1276382 | + | 591 | WP_003109780.1 | hypothetical protein | VF |
| N4T34_RS06165 (N4T34_06170) | 1276379..1276927 | + | 549 | WP_003109779.1 | integrating conjugative element protein | - |
| N4T34_RS06170 (N4T34_06175) | 1276932..1279124 | + | 2193 | WP_003116813.1 | type IV conjugative transfer system coupling protein TraD | - |
| N4T34_RS06175 (N4T34_06180) | 1279121..1279870 | + | 750 | WP_003105620.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| N4T34_RS06180 (N4T34_06185) | 1279911..1282535 | - | 2625 | WP_003116812.1 | AAA family ATPase | - |
| N4T34_RS06185 (N4T34_06190) | 1282545..1283270 | - | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| N4T34_RS06190 (N4T34_06195) | 1283309..1284211 | - | 903 | WP_003105624.1 | CBASS oligonucleotide cyclase | - |
| N4T34_RS06195 (N4T34_06200) | 1284211..1284711 | - | 501 | WP_003090159.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| N4T34_RS06200 (N4T34_06205) | 1284708..1285178 | - | 471 | WP_003105626.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| N4T34_RS06205 (N4T34_06210) | 1285175..1286089 | - | 915 | WP_003105629.1 | AAA family ATPase | - |
| N4T34_RS06210 (N4T34_06215) | 1286107..1286682 | - | 576 | WP_003109777.1 | PIN domain-containing protein | Toxin Detail |
| N4T34_RS06215 (N4T34_06220) | 1286679..1287149 | - | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| N4T34_RS06220 (N4T34_06225) | 1287353..1287736 | + | 384 | WP_003105635.1 | RAQPRD family integrative conjugative element protein | - |
| N4T34_RS06225 (N4T34_06230) | 1287733..1287966 | + | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| N4T34_RS06230 (N4T34_06235) | 1287983..1288342 | + | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| N4T34_RS06235 (N4T34_06240) | 1288354..1288752 | + | 399 | WP_003105639.1 | TIGR03750 family conjugal transfer protein | - |
| N4T34_RS06240 (N4T34_06245) | 1288749..1289441 | + | 693 | WP_054480731.1 | TIGR03746 family integrating conjugative element protein | - |
| N4T34_RS06245 (N4T34_06250) | 1289438..1290349 | + | 912 | WP_003105643.1 | TIGR03749 family integrating conjugative element protein | - |
| N4T34_RS06250 (N4T34_06255) | 1290339..1291757 | + | 1419 | WP_003109776.1 | TIGR03752 family integrating conjugative element protein | - |
| N4T34_RS06255 (N4T34_06260) | 1291738..1292187 | + | 450 | WP_003109775.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| N4T34_RS06260 (N4T34_06265) | 1292187..1295078 | + | 2892 | WP_003105079.1 | conjugative transfer ATPase | - |
| N4T34_RS06265 (N4T34_06270) | 1295103..1295870 | + | 768 | WP_003090202.1 | thioredoxin domain-containing protein | - |
| N4T34_RS06270 (N4T34_06275) | 1296046..1296540 | + | 495 | WP_003090203.1 | JAB domain-containing protein | - |
| N4T34_RS06275 (N4T34_06280) | 1296705..1297151 | + | 447 | WP_003109772.1 | TIGR03757 family integrating conjugative element protein | - |
| N4T34_RS06280 (N4T34_06285) | 1297148..1298098 | + | 951 | WP_261503921.1 | TIGR03756 family integrating conjugative element protein | - |
| N4T34_RS06285 (N4T34_06290) | 1298108..1299502 | + | 1395 | WP_003109770.1 | integrating conjugative element protein | - |
| N4T34_RS06290 (N4T34_06295) | 1299499..1299858 | + | 360 | WP_003090212.1 | hypothetical protein | - |
| N4T34_RS06295 (N4T34_06300) | 1299872..1301392 | + | 1521 | WP_003090214.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| N4T34_RS06300 (N4T34_06305) | 1301404..1301769 | - | 366 | WP_003090216.1 | DUF3742 family protein | - |
| N4T34_RS06305 (N4T34_06310) | 1301854..1302486 | - | 633 | WP_003090219.1 | RES family NAD+ phosphorylase | - |
| N4T34_RS06310 (N4T34_06315) | 1302499..1303125 | - | 627 | WP_003109769.1 | hypothetical protein | - |
| N4T34_RS06315 (N4T34_06320) | 1303441..1305288 | + | 1848 | WP_003109768.1 | MobH family relaxase | - |
| N4T34_RS06320 (N4T34_06325) | 1305699..1306778 | + | 1080 | Protein_1247 | Efflux pump periplasmic linker BepF | VF |
| N4T34_RS06325 (N4T34_06330) | 1306871..1307316 | + | 446 | Protein_1248 | Efflux pump membrane transporter BepE | VF |
| N4T34_RS06330 (N4T34_06335) | 1307599..1309062 | + | 1464 | Protein_1249 | chromosome partitioning protein ParB | - |
| N4T34_RS06335 (N4T34_06340) | 1309270..1309800 | - | 531 | WP_003107230.1 | N-acetyltransferase | - |
| N4T34_RS06340 (N4T34_06345) | 1309806..1311035 | - | 1230 | WP_003107233.1 | chromate efflux transporter | - |
| N4T34_RS06345 (N4T34_06350) | 1311032..1311361 | - | 330 | WP_015014846.1 | PadR family transcriptional regulator | - |
| N4T34_RS06350 (N4T34_06355) | 1311433..1311855 | - | 423 | WP_003107236.1 | arsenate reductase (glutaredoxin) | - |
| N4T34_RS06355 (N4T34_06360) | 1311870..1312955 | - | 1086 | WP_003109696.1 | ACR3 family arsenite efflux transporter | - |
| N4T34_RS06360 (N4T34_06365) | 1312966..1313463 | - | 498 | WP_003107241.1 | arsenate reductase ArsC | - |
| N4T34_RS06365 (N4T34_06370) | 1313476..1313946 | - | 471 | WP_003107243.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| N4T34_RS06370 (N4T34_06375) | 1313960..1314289 | - | 330 | WP_003116799.1 | helix-turn-helix domain-containing protein | - |
| N4T34_RS06375 (N4T34_06380) | 1315237..1316673 | - | 1437 | WP_003097498.1 | Sensor histidine kinase CusS | VF |
| N4T34_RS06380 (N4T34_06385) | 1316645..1317337 | - | 693 | WP_003097513.1 | Transcriptional regulatory protein CusR | VF |
| N4T34_RS06385 (N4T34_06390) | 1317592..1319493 | + | 1902 | WP_003097515.1 | copper resistance system multicopper oxidase | - |
| N4T34_RS06390 (N4T34_06395) | 1319519..1320499 | + | 981 | WP_005408883.1 | copper resistance protein B | - |
| N4T34_RS06395 (N4T34_06400) | 1320537..1321022 | + | 486 | WP_003090303.1 | DUF411 domain-containing protein | - |
| N4T34_RS06400 (N4T34_06405) | 1321056..1321328 | + | 273 | WP_003097518.1 | DUF2933 domain-containing protein | - |
| N4T34_RS06405 (N4T34_06410) | 1321616..1323922 | + | 2307 | WP_228777907.1 | heavy metal translocating P-type ATPase | - |
| N4T34_RS06410 (N4T34_06415) | 1324064..1324450 | + | 387 | WP_003090319.1 | copper homeostasis periplasmic binding protein CopC | - |
| N4T34_RS06415 (N4T34_06420) | 1324455..1325381 | + | 927 | WP_003097522.1 | copper homeostasis membrane protein CopD | - |
| N4T34_RS06420 (N4T34_06425) | 1325510..1325794 | + | 285 | WP_003090336.1 | CopK family periplasmic copper-binding protein | - |
| N4T34_RS06425 (N4T34_06430) | 1326026..1326916 | + | 891 | WP_003097524.1 | LysR family transcriptional regulator | - |
| N4T34_RS06430 (N4T34_06435) | 1326921..1327226 | - | 306 | WP_003097526.1 | helix-turn-helix transcriptional regulator | - |
| N4T34_RS06435 (N4T34_06440) | 1327334..1327945 | + | 612 | Protein_1270 | LysR substrate-binding domain-containing protein | - |
| N4T34_RS06440 (N4T34_06445) | 1328482..1328483 | - | 2 | WP_086009121.1 | IS5-like element ISStma16 family transposase | - |
| N4T34_RS06445 (N4T34_06450) | 1328948..1330255 | + | 1308 | WP_003097539.1 | TolC family protein | - |
| N4T34_RS06450 (N4T34_06455) | 1330468..1331259 | - | 792 | WP_031636494.1 | IS21 family transposase ISPa36 | Transposase |
| N4T34_RS06455 (N4T34_06460) | 1331246..1332745 | - | 1500 | WP_003097546.1 | IS21 family transposase ISPa36 | Transposase |
| N4T34_RS06460 (N4T34_06465) | 1332865..1334799 | - | 1935 | WP_003097548.1 | hypothetical protein ; Integrase | Integrase |
| N4T34_RS06475 (N4T34_06480) | 1335644..1335928 | + | 285 | WP_127481512.1 | hypothetical protein | - |
| N4T34_RS06480 (N4T34_06485) | 1335965..1337002 | + | 1038 | WP_054472874.1 | UDP-N-acetylmuramate dehydrogenase | - |
| N4T34_RS06485 (N4T34_06490) | 1337067..1337858 | - | 792 | WP_006389037.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| N4T34_RS06490 (N4T34_06495) | 1337874..1338410 | - | 537 | WP_054496807.1 | outer membrane protein assembly factor BamE | - |
| N4T34_RS06495 (N4T34_06500) | 1338567..1338986 | + | 420 | WP_006223539.1 | ferric iron uptake transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|