MGE detailed information
MGE type: Prophage MGE length: 44314 bp
Accession: NZ_CP104788 Location: 4717100..4761413 Organism: Escherichia coli strain SHP24 Replicon: chromosome
Accession: NZ_CP104788 Location: 4717100..4761413 Organism: Escherichia coli strain SHP24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N6H17_RS23030 (4712877) | 4712877..4713959 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| N6H17_RS23035 (4714078) | 4714078..4715580 | - | 1503 | Protein_4484 | DUF853 domain-containing protein | - |
| N6H17_RS23040 (4715710) | 4715710..4716729 | - | 1020 | WP_000061768.1 | NADPH-dependent aldehyde reductase Ahr | - |
| N6H17_RS23050 (4717100) | 4717100..4719010 | + | 1911 | WP_000083138.1 | hypothetical protein ; Integrase | Integrase |
| N6H17_RS23055 (4719143) | 4719143..4719475 | - | 333 | WP_001261095.1 | NIPSNAP family protein | - |
| N6H17_RS23060 (4720481) | 4720481..4720947 | - | 467 | Protein_4488 | DUF1643 domain-containing protein | - |
| N6H17_RS23065 (4721140) | 4721140..4721700 | + | 561 | WP_000190110.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| N6H17_RS23070 (4721714) | 4721714..4722559 | + | 846 | WP_000331917.1 | hypothetical protein | - |
| N6H17_RS23075 (4722620) | 4722620..4723114 | - | 495 | WP_000145203.1 | membrane protein | - |
| N6H17_RS23080 (4723355) | 4723355..4723819 | + | 465 | WP_000749342.1 | helix-turn-helix transcriptional regulator | - |
| N6H17_RS23085 (4724857) | 4724857..4725681 | + | 825 | WP_000594911.1 | hypothetical protein | - |
| N6H17_RS23090 (4725730) | 4725730..4726302 | - | 573 | WP_000227281.1 | hypothetical protein | - |
| N6H17_RS23095 (4726403) | 4726403..4726660 | + | 258 | Protein_4495 | IS3 family transposase IS911 | Transposase |
| N6H17_RS23100 (4726673) | 4726673..4727824 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| N6H17_RS23105 (4727821) | 4727821..4727901 | - | 81 | Protein_4497 | hypothetical protein | - |
| N6H17_RS23110 (4727889) | 4727889..4728793 | + | 905 | Protein_4498 | IS3 family transposase | - |
| N6H17_RS23115 (4728876) | 4728876..4729133 | + | 258 | WP_000177060.1 | hypothetical protein | - |
| N6H17_RS23120 (4729691) | 4729691..4730458 | - | 768 | WP_000175457.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| N6H17_RS23125 (4730459) | 4730459..4731415 | - | 957 | WP_000684856.1 | Vitamin B12 import system permease protein BtuC | VF |
| N6H17_RS23130 (4731412) | 4731412..4732410 | - | 999 | WP_000125187.1 | Vitamin B12 import system permease protein BtuC | VF |
| N6H17_RS23135 (4732407) | 4732407..4733309 | - | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| N6H17_RS23140 (4733354) | 4733354..4735678 | - | 2325 | WP_000188280.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| N6H17_RS23145 (4735765) | 4735765..4736718 | - | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
| N6H17_RS23150 (4736715) | 4736715..4737236 | - | 522 | WP_001283626.1 | hypothetical protein | VF |
| N6H17_RS23155 (4737373) | 4737373..4737441 | + | 69 | WP_211180522.1 | protein YkiE | - |
| N6H17_RS23160 (4737528) | 4737528..4738223 | + | 696 | Protein_4508 | IS1 family transposase | - |
| N6H17_RS23165 (4738365) | 4738365..4738514 | + | 150 | Protein_4509 | IS3 family transposase | - |
| N6H17_RS23170 (4738541) | 4738541..4738645 | + | 105 | Protein_4510 | IS3 family transposase | - |
| N6H17_RS23175 (4739149) | 4739149..4739241 | + | 93 | WP_233298815.1 | hypothetical protein | - |
| N6H17_RS23180 (4739366) | 4739366..4739496 | - | 131 | Protein_4512 | IS5/IS1182 family transposase | - |
| N6H17_RS23185 (4739561) | 4739561..4739692 | - | 132 | Protein_4513 | IS3 family transposase | - |
| N6H17_RS23190 (4739974) | 4739974..4741332 | + | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| N6H17_RS23195 (4741454) | 4741454..4741531 | - | 78 | Protein_4515 | DUF6404 family protein | - |
| N6H17_RS23200 (4741571) | 4741571..4742956 | - | 1386 | WP_000997960.1 | IS66 family transposase ISEc8 | Transposase |
| N6H17_RS23205 (4743006) | 4743006..4743353 | - | 348 | WP_000612632.1 | IS66 family transposase ISEc8 | Transposase |
| N6H17_RS23210 (4743350) | 4743350..4743730 | - | 381 | WP_002431009.1 | IS66 family transposase ISEc8 | Transposase |
| N6H17_RS23215 (4744085) | 4744085..4744519 | - | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| N6H17_RS23220 (4744507) | 4744507..4744908 | - | 402 | WP_261629547.1 | zinc-ribbon domain-containing protein | - |
| N6H17_RS23225 (4745168) | 4745168..4745737 | - | 570 | WP_000221544.1 | inovirus Gp2 family protein | - |
| N6H17_RS23230 (4745937) | 4745937..4746137 | + | 201 | WP_001297219.1 | hypothetical protein | - |
| N6H17_RS23235 (4746650) | 4746650..4747327 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| N6H17_RS23240 (4747327) | 4747327..4747674 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| N6H17_RS23245 (4747694) | 4747694..4749265 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| N6H17_RS23255 (4751155) | 4751155..4751523 | + | 369 | WP_001315620.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| N6H17_RS23260 (4751613) | 4751613..4751987 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| N6H17_RS23265 (4751984) | 4751984..4752472 | + | 489 | WP_000777547.1 | DUF5983 family protein | - |
| N6H17_RS23270 (4752484) | 4752484..4752681 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| N6H17_RS23275 (4752766) | 4752766..4752915 | + | 150 | Protein_4531 | restriction endonuclease subunit M | - |
| N6H17_RS23280 (4753683) | 4753683..4753826 | - | 144 | Protein_4532 | HNH endonuclease | - |
| N6H17_RS23285 (4753963) | 4753963..4754613 | + | 651 | WP_261629548.1 | HNH endonuclease | - |
| N6H17_RS23290 (4754621) | 4754621..4755601 | - | 981 | WP_001295601.1 | sialate O-acetylesterase | - |
| N6H17_RS23295 (4755666) | 4755666..4756772 | - | 1107 | WP_001315214.1 | N-acetylneuraminate epimerase | - |
| N6H17_RS23300 (4756792) | 4756792..4757508 | - | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| N6H17_RS23305 (4758962) | 4758962..4759564 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| N6H17_RS23310 (4760041) | 4760041..4760151 | + | 111 | Protein_4538 | tyrosine recombinase | - |
| N6H17_RS23315 (4760205) | 4760205..4760902 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| N6H17_RS23320 (4760919) | 4760919..4761413 | + | 495 | Protein_4540 | Tyrosine recombinase XerC | VF |
| N6H17_RS23325 (4761895) | 4761895..4762449 | + | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| N6H17_RS23330 (4762514) | 4762514..4763053 | + | 540 | WP_000824114.1 | fimbrial protein | - |
| N6H17_RS23335 (4763090) | 4763090..4763815 | + | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|