MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 80578 bp
Accession: NZ_CP104757 Location: 3044301..3124878 Organism: Pectobacterium aroidearum strain QJ021 Replicon: chromosome
Accession: NZ_CP104757 Location: 3044301..3124878 Organism: Pectobacterium aroidearum strain QJ021 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5056_RS13540 (N5056_13540) | 3041071..3041274 | - | 204 | WP_015840819.1 | protein DsrB | - |
| N5056_RS13545 (N5056_13545) | 3041485..3042900 | + | 1416 | WP_181828896.1 | diguanylate cyclase | - |
| N5056_RS13550 (N5056_13550) | 3043172..3043390 | + | 219 | WP_180777774.1 | KTSC domain-containing protein | - |
| N5056_RS13555 (N5056_13555) | 3043617..3043973 | + | 357 | WP_181828897.1 | hypothetical protein | - |
| N5056_RS13560 (N5056_13560) | 3044562..3044804 | - | 243 | WP_181838213.1 | hypothetical protein | - |
| N5056_RS13565 (N5056_13565) | 3044927..3045760 | - | 834 | WP_181838219.1 | DUF4942 domain-containing protein | - |
| N5056_RS13570 (N5056_13570) | 3045878..3046198 | - | 321 | WP_181838212.1 | TA system toxin CbtA family protein | Toxin Detail |
| N5056_RS13575 (N5056_13575) | 3046268..3046603 | - | 336 | WP_110162281.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| N5056_RS13580 (N5056_13580) | 3046643..3047116 | - | 474 | WP_181838211.1 | DNA repair protein RadC | - |
| N5056_RS13585 (N5056_13585) | 3047239..3047589 | - | 351 | WP_005974477.1 | hypothetical protein | - |
| N5056_RS13590 (N5056_13590) | 3047647..3048480 | - | 834 | WP_181838210.1 | hypothetical protein | - |
| N5056_RS13595 (N5056_13595) | 3048627..3048785 | - | 159 | WP_155242703.1 | hypothetical protein | - |
| N5056_RS13600 (N5056_13600) | 3048969..3049856 | - | 888 | WP_181838209.1 | 50S ribosome-binding GTPase | - |
| N5056_RS13605 (N5056_13605) | 3049952..3050983 | - | 1032 | WP_181838208.1 | hypothetical protein | - |
| N5056_RS13610 (N5056_13610) | 3051745..3052335 | + | 591 | WP_181838207.1 | inovirus-type Gp2 protein | - |
| N5056_RS13615 (N5056_13615) | 3052440..3052652 | + | 213 | WP_181838206.1 | AlpA family transcriptional regulator | - |
| N5056_RS13620 (N5056_13620) | 3052745..3053170 | + | 426 | WP_181838205.1 | putative zinc ribbon protein | - |
| N5056_RS13625 (N5056_13625) | 3053324..3053905 | + | 582 | WP_181838204.1 | hypothetical protein | - |
| N5056_RS13630 (N5056_13630) | 3054225..3054743 | + | 519 | WP_039503428.1 | hypothetical protein | VF |
| N5056_RS13635 (N5056_13635) | 3054865..3056694 | + | 1830 | WP_181838203.1 | hypothetical protein | VF |
| N5056_RS13640 (N5056_13640) | 3056723..3057166 | + | 444 | WP_048257607.1 | DUF1795 domain-containing protein | - |
| N5056_RS13645 (N5056_13645) | 3057159..3061433 | + | 4275 | WP_181838202.1 | RHS repeat-associated core domain-containing protein | - |
| N5056_RS13650 (N5056_13650) | 3061449..3061886 | + | 438 | WP_180787456.1 | hypothetical protein | - |
| N5056_RS13655 (N5056_13655) | 3062497..3063951 | + | 1455 | WP_181838201.1 | hypothetical protein | VF |
| N5056_RS13660 (N5056_13660) | 3064003..3064548 | + | 546 | WP_181838200.1 | LuxR C-terminal-related transcriptional regulator | - |
| N5056_RS13665 (N5056_13665) | 3064716..3068315 | - | 3600 | WP_181838199.1 | AAA domain-containing protein | - |
| N5056_RS13670 (N5056_13670) | 3068683..3069768 | + | 1086 | WP_180742539.1 | DNA sulfur modification protein DndB | - |
| N5056_RS13675 (N5056_13675) | 3069765..3071402 | + | 1638 | WP_181838198.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| N5056_RS13680 (N5056_13680) | 3071392..3073401 | + | 2010 | WP_181838197.1 | DNA sulfur modification protein DndD | - |
| N5056_RS13685 (N5056_13685) | 3073401..3073754 | + | 354 | WP_181838196.1 | DNA sulfur modification protein DndE | - |
| N5056_RS13690 (N5056_13690) | 3073840..3074109 | - | 270 | Protein_2694 | IS481 family transposase ISErsp1 | Transposase |
| N5056_RS13695 (N5056_13695) | 3074173..3075260 | + | 1088 | WP_181838195.1 | IS3 family transposase ISKpn20 | Transposase |
| N5056_RS13700 (N5056_13700) | 3075304..3076080 | - | 777 | Protein_2696 | IS481 family transposase ISErsp1 | Transposase |
| N5056_RS13705 (N5056_13705) | 3076223..3077434 | - | 1212 | WP_181838194.1 | DNA phosphorothioation-associated DGQHR protein 1 | - |
| N5056_RS13710 (N5056_13710) | 3077431..3077922 | - | 492 | WP_181838193.1 | hypothetical protein | - |
| N5056_RS13715 (N5056_13715) | 3077951..3083029 | - | 5079 | WP_181838192.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| N5056_RS13720 (N5056_13720) | 3083010..3084335 | - | 1326 | WP_181838191.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| N5056_RS13725 (N5056_13725) | 3084340..3085989 | - | 1650 | WP_181838190.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| N5056_RS13730 (N5056_13730) | 3086177..3087436 | - | 1260 | WP_181838189.1 | hypothetical protein ; Integrase | Integrase |
| N5056_RS13735 (N5056_13735) | 3087929..3088459 | - | 531 | WP_181828898.1 | lysis system i-spanin subunit Rz | - |
| N5056_RS13740 (N5056_13740) | 3088456..3089001 | - | 546 | WP_181828899.1 | lysozyme | - |
| N5056_RS13745 (N5056_13745) | 3088988..3089269 | - | 282 | WP_181828900.1 | hypothetical protein | - |
| N5056_RS13750 (N5056_13750) | 3089339..3091690 | - | 2352 | WP_181828901.1 | phage tail fiber protein | - |
| N5056_RS13755 (N5056_13755) | 3091706..3093316 | - | 1611 | WP_181828902.1 | phage terminase large subunit | - |
| N5056_RS13760 (N5056_13760) | 3093313..3093648 | - | 336 | WP_181828903.1 | hypothetical protein | - |
| N5056_RS13765 (N5056_13765) | 3093737..3094045 | - | 309 | WP_181828904.1 | hypothetical protein | - |
| N5056_RS13770 (N5056_13770) | 3094054..3096534 | - | 2481 | WP_181828905.1 | hypothetical protein | - |
| N5056_RS13775 (N5056_13775) | 3096539..3098314 | - | 1776 | WP_181828906.1 | hypothetical protein | - |
| N5056_RS13780 (N5056_13780) | 3098311..3100215 | - | 1905 | WP_261581068.1 | hypothetical protein | - |
| N5056_RS13785 (N5056_13785) | 3100308..3100835 | - | 528 | WP_181828907.1 | hypothetical protein | - |
| N5056_RS13790 (N5056_13790) | 3100838..3101284 | - | 447 | WP_181828908.1 | GNAT family N-acetyltransferase | - |
| N5056_RS13795 (N5056_13795) | 3101287..3103263 | - | 1977 | WP_181828909.1 | hypothetical protein | - |
| N5056_RS13800 (N5056_13800) | 3103266..3103829 | - | 564 | WP_181828910.1 | hypothetical protein | - |
| N5056_RS13805 (N5056_13805) | 3103884..3104789 | - | 906 | WP_181828911.1 | phage capsid protein | - |
| N5056_RS13810 (N5056_13810) | 3104788..3104913 | + | 126 | WP_258876612.1 | hypothetical protein | - |
| N5056_RS13815 (N5056_13815) | 3104996..3105814 | - | 819 | WP_181828912.1 | hypothetical protein | - |
| N5056_RS13820 (N5056_13820) | 3105798..3106031 | - | 234 | WP_181828913.1 | hypothetical protein | - |
| N5056_RS13825 (N5056_13825) | 3106031..3107656 | - | 1626 | WP_181829166.1 | portal protein | - |
| N5056_RS13830 (N5056_13830) | 3107659..3107877 | - | 219 | WP_039494579.1 | hypothetical protein | - |
| N5056_RS13835 (N5056_13835) | 3107888..3108346 | - | 459 | WP_181828914.1 | hypothetical protein | - |
| N5056_RS13840 (N5056_13840) | 3108833..3109120 | - | 288 | WP_181828915.1 | DUF1364 domain-containing protein | - |
| N5056_RS13845 (N5056_13845) | 3109117..3110103 | - | 987 | WP_181828916.1 | hypothetical protein | - |
| N5056_RS13850 (N5056_13850) | 3110187..3110780 | - | 594 | WP_181828917.1 | DUF1367 family protein | - |
| N5056_RS13855 (N5056_13855) | 3110841..3111032 | - | 192 | WP_181828918.1 | hypothetical protein | - |
| N5056_RS13860 (N5056_13860) | 3111127..3111480 | - | 354 | WP_181828919.1 | hypothetical protein | - |
| N5056_RS13865 (N5056_13865) | 3111477..3113516 | - | 2040 | WP_258876288.1 | DNA cytosine methyltransferase | - |
| N5056_RS13870 (N5056_13870) | 3113513..3113902 | - | 390 | WP_181828920.1 | hypothetical protein | - |
| N5056_RS13875 (N5056_13875) | 3113895..3114719 | - | 825 | WP_181828921.1 | hypothetical protein | - |
| N5056_RS13880 (N5056_13880) | 3114716..3114970 | - | 255 | WP_181828922.1 | hypothetical protein | - |
| N5056_RS13885 (N5056_13885) | 3114973..3115452 | - | 480 | WP_016060761.1 | hypothetical protein | - |
| N5056_RS13890 (N5056_13890) | 3115498..3116910 | - | 1413 | WP_181828923.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| N5056_RS13895 (N5056_13895) | 3116900..3117670 | - | 771 | WP_181828924.1 | helix-turn-helix domain-containing protein | - |
| N5056_RS13900 (N5056_13900) | 3117673..3117897 | - | 225 | WP_181828925.1 | hypothetical protein | - |
| N5056_RS13905 (N5056_13905) | 3117915..3118376 | - | 462 | WP_181828926.1 | toxin YdaT family protein | - |
| N5056_RS13910 (N5056_13910) | 3118440..3118640 | - | 201 | WP_181828927.1 | Cro/CI family transcriptional regulator | - |
| N5056_RS13915 (N5056_13915) | 3118724..3119122 | + | 399 | WP_181828928.1 | helix-turn-helix domain-containing protein | - |
| N5056_RS13920 (N5056_13920) | 3119359..3119682 | + | 324 | WP_181828929.1 | hypothetical protein | - |
| N5056_RS13925 (N5056_13925) | 3120091..3120384 | + | 294 | WP_220273781.1 | hypothetical protein | - |
| N5056_RS13930 (N5056_13930) | 3120403..3122574 | + | 2172 | WP_182121254.1 | exodeoxyribonuclease VIII-like protein | - |
| N5056_RS13935 (N5056_13935) | 3122571..3123071 | + | 501 | WP_181828932.1 | siphovirus Gp157 family protein | - |
| N5056_RS13940 (N5056_13940) | 3123314..3123529 | + | 216 | WP_261581134.1 | hypothetical protein | - |
| N5056_RS13945 (N5056_13945) | 3123480..3123695 | + | 216 | WP_181828934.1 | DUF4224 domain-containing protein | - |
| N5056_RS13950 (N5056_13950) | 3123698..3124723 | + | 1026 | WP_181828935.1 | hypothetical protein ; Integrase | Integrase |
| N5056_RS13970 (N5056_13970) | 3125290..3125838 | - | 549 | WP_010279374.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| N5056_RS13975 (N5056_13975) | 3125897..3127729 | - | 1833 | WP_015840868.1 | excinuclease ABC subunit UvrC | - |
| N5056_RS13980 (N5056_13980) | 3127722..3128378 | - | 657 | WP_010279369.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| N5056_RS13985 (N5056_13985) | 3129022..3129246 | + | 225 | WP_015840869.1 | DUF2594 family protein | - |
| N5056_RS13990 (N5056_13990) | 3129339..3129626 | - | 288 | WP_015840870.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|