MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 40042 bp
Accession: NZ_CP104746 Location: 1..40042 Organism: Erwinia pyrifoliae strain CP20113301 Replicon: plasmid unnamed1
Accession: NZ_CP104746 Location: 1..40042 Organism: Erwinia pyrifoliae strain CP20113301 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYP80_RS19225 (NYP80_19225) | 193..729 | - | 537 | WP_261648143.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NYP80_RS19230 (NYP80_19230) | 927..1712 | - | 786 | WP_261648144.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NYP80_RS19235 (NYP80_19235) | 1712..3547 | - | 1836 | WP_261648145.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NYP80_RS19240 (NYP80_19240) | 3544..4152 | - | 609 | WP_261648146.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NYP80_RS19245 (NYP80_19245) | 4167..5132 | - | 966 | WP_191928377.1 | conjugal transfer pilus assembly protein TraU | - |
| NYP80_RS19250 (NYP80_19250) | 5150..5779 | - | 630 | WP_261648147.1 | type-F conjugative transfer system protein TraW | - |
| NYP80_RS19255 (NYP80_19255) | 5980..6384 | - | 405 | WP_261648148.1 | type-F conjugative transfer system protein TrbI | - |
| NYP80_RS19260 (NYP80_19260) | 6372..8966 | - | 2595 | WP_261648149.1 | type IV secretion system protein TraC | - |
| NYP80_RS19265 (NYP80_19265) | 8963..9343 | - | 381 | WP_261648150.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NYP80_RS19270 (NYP80_19270) | 9424..9771 | - | 348 | WP_261648151.1 | hypothetical protein | - |
| NYP80_RS19275 (NYP80_19275) | 9875..11239 | - | 1365 | WP_261648152.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NYP80_RS19280 (NYP80_19280) | 11236..11967 | - | 732 | WP_261648153.1 | type-F conjugative transfer system secretin TraK | - |
| NYP80_RS19285 (NYP80_19285) | 11951..12520 | - | 570 | WP_261648154.1 | type IV conjugative transfer system protein TraE | - |
| NYP80_RS19290 (NYP80_19290) | 12533..12841 | - | 309 | WP_261648155.1 | type IV conjugative transfer system protein TraL | - |
| NYP80_RS19295 (NYP80_19295) | 12854..13192 | - | 339 | WP_261648156.1 | type IV conjugative transfer system pilin TraA | - |
| NYP80_RS19300 (NYP80_19300) | 13524..13739 | - | 216 | WP_261648157.1 | hypothetical protein | - |
| NYP80_RS19305 (NYP80_19305) | 13802..14434 | - | 633 | WP_261648158.1 | transcription termination/antitermination NusG family protein | - |
| NYP80_RS19310 (NYP80_19310) | 14755..15303 | + | 549 | WP_261648159.1 | helix-turn-helix transcriptional regulator | - |
| NYP80_RS19315 (NYP80_19315) | 15425..15901 | + | 477 | WP_261648160.1 | hypothetical protein | - |
| NYP80_RS19320 (NYP80_19320) | 15990..16403 | - | 414 | WP_261648161.1 | relaxosome protein TraM | - |
| NYP80_RS19325 (NYP80_19325) | 16902..17036 | - | 135 | WP_261648162.1 | hypothetical protein | - |
| NYP80_RS19330 (NYP80_19330) | 17104..17298 | - | 195 | WP_261648163.1 | hypothetical protein | - |
| NYP80_RS19335 (NYP80_19335) | 17350..17679 | - | 330 | WP_261648164.1 | hypothetical protein | - |
| NYP80_RS19340 (NYP80_19340) | 17777..17995 | - | 219 | WP_261648165.1 | hypothetical protein | - |
| NYP80_RS19345 (NYP80_19345) | 17988..18254 | - | 267 | WP_261648166.1 | hypothetical protein | - |
| NYP80_RS19350 (NYP80_19350) | 18266..18808 | - | 543 | WP_261648167.1 | hypothetical protein | - |
| NYP80_RS19355 (NYP80_19355) | 18852..19367 | - | 516 | WP_261648168.1 | DnaJ domain-containing protein | - |
| NYP80_RS19360 (NYP80_19360) | 19827..20234 | + | 408 | WP_261648169.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NYP80_RS19365 (NYP80_19365) | 20227..20544 | + | 318 | WP_261648134.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| NYP80_RS19370 (NYP80_19370) | 20949..21932 | + | 984 | WP_261648135.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NYP80_RS19375 (NYP80_19375) | 21955..22290 | - | 336 | WP_044242374.1 | hypothetical protein | - |
| NYP80_RS19380 (NYP80_19380) | 22287..22994 | - | 708 | WP_261648136.1 | ParA family protein | - |
| NYP80_RS19385 (NYP80_19385) | 24162..25025 | - | 864 | WP_191928390.1 | incFII family plasmid replication initiator RepA | - |
| NYP80_RS19390 (NYP80_19390) | 25018..25092 | - | 75 | WP_261648170.1 | RepA leader peptide Tap | - |
| NYP80_RS19395 (NYP80_19395) | 25321..25590 | - | 270 | WP_261648171.1 | replication regulatory protein RepA | - |
| NYP80_RS19400 (NYP80_19400) | 25719..26282 | - | 564 | WP_261648172.1 | Cardiolipin synthase A | VF |
| NYP80_RS19405 (NYP80_19405) | 26433..26849 | + | 417 | WP_261648173.1 | DUF2913 family protein | - |
| NYP80_RS19410 (NYP80_19410) | 26859..32072 | - | 5214 | WP_261648137.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| NYP80_RS19415 (NYP80_19415) | 32072..34210 | - | 2139 | WP_261648138.1 | type IV conjugative transfer system coupling protein TraD | - |
| NYP80_RS19420 (NYP80_19420) | 34232..34699 | - | 468 | WP_191928395.1 | hypothetical protein | VF |
| NYP80_RS19425 (NYP80_19425) | 34821..35237 | - | 417 | WP_261648139.1 | hypothetical protein | - |
| NYP80_RS19430 (NYP80_19430) | 35256..36047 | - | 792 | WP_261648140.1 | hypothetical protein | - |
| NYP80_RS19435 (NYP80_19435) | 36067..38871 | - | 2805 | WP_261648141.1 | conjugal transfer mating-pair stabilization protein TraG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|