MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 55280 bp
Accession: NZ_CP104733 Location: 1547475..1602754 Organism: Pectobacterium sp. F1-1 Replicon: chromosome
Accession: NZ_CP104733 Location: 1547475..1602754 Organism: Pectobacterium sp. F1-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NAL19_RS06730 (NAL19_1445) | 1542905..1543711 | - | 807 | WP_263059191.1 | hypothetical protein | - |
| NAL19_RS06735 (NAL19_1446) | 1543820..1544272 | - | 453 | WP_225087487.1 | hypothetical protein | - |
| NAL19_RS06740 (NAL19_1447) | 1544785..1545060 | - | 276 | Protein_1305 | DUF1869 domain-containing protein | - |
| NAL19_RS06745 | 1545115..1545809 | + | 695 | WP_263058758.1 | IS1 family transposase | - |
| NAL19_RS06750 (NAL19_1451) | 1545906..1546238 | - | 333 | WP_180742483.1 | DUF1971 domain-containing protein | - |
| NAL19_RS06755 (NAL19_1453) | 1546618..1547208 | + | 591 | WP_263059192.1 | flavin reductase family protein | - |
| NAL19_RS06760 | 1547551..1548773 | - | 1223 | Protein_1309 | IS3 family transposase | - |
| NAL19_RS06765 (NAL19_1456) | 1549013..1549762 | - | 750 | WP_024108537.1 | putative oxidoreductase YgfF | VF |
| NAL19_RS06770 (NAL19_1457) | 1549766..1551019 | - | 1254 | WP_263059193.1 | MFS transporter | - |
| NAL19_RS06775 (NAL19_1458) | 1551327..1552220 | + | 894 | WP_263059194.1 | phosphoenolpyruvate mutase | - |
| NAL19_RS06780 (NAL19_1459) | 1552224..1553342 | + | 1119 | WP_263059195.1 | phosphonopyruvate decarboxylase | - |
| NAL19_RS06785 (NAL19_1460) | 1553332..1554552 | + | 1221 | WP_026594701.1 | pyridoxal phosphate-dependent aminotransferase | - |
| NAL19_RS06790 (NAL19_1461) | 1554567..1555403 | + | 837 | WP_024108542.1 | phytanoyl-CoA dioxygenase family protein | - |
| NAL19_RS06795 (NAL19_1462) | 1555416..1556525 | + | 1110 | WP_263059196.1 | 2-aminoethylphosphonate--pyruvate transaminase | - |
| NAL19_RS06800 (NAL19_1463) | 1556522..1557622 | + | 1101 | WP_263059197.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| NAL19_RS06805 (NAL19_1464) | 1557612..1558631 | + | 1020 | WP_024108545.1 | GNAT family N-acetyltransferase | - |
| NAL19_RS06810 (NAL19_1466) | 1558791..1559618 | + | 828 | WP_263059198.1 | class I SAM-dependent methyltransferase | - |
| NAL19_RS06815 (NAL19_1467) | 1559615..1560811 | + | 1197 | WP_263059199.1 | ATP-grasp domain-containing protein | - |
| NAL19_RS06820 (NAL19_1468) | 1560813..1561502 | + | 690 | WP_024108548.1 | aspartyl/asparaginyl beta-hydroxylase domain-containing protein | - |
| NAL19_RS06825 (NAL19_1469) | 1561640..1561849 | + | 210 | Protein_1322 | IS481 family transposase ISErsp1 | Transposase |
| NAL19_RS06830 | 1562105..1562233 | + | 129 | WP_009113454.1 | hypothetical protein | - |
| NAL19_RS06835 (NAL19_1470) | 1562297..1564495 | - | 2199 | WP_263059200.1 | DEAD/DEAH box helicase | - |
| NAL19_RS06840 (NAL19_1471) | 1564492..1565808 | - | 1317 | WP_263059201.1 | ATP-binding protein | - |
| NAL19_RS06845 (NAL19_1472) | 1565812..1568121 | - | 2310 | WP_263059202.1 | TerB N-terminal domain-containing protein | - |
| NAL19_RS06850 (NAL19_1473) | 1568846..1569790 | + | 945 | WP_263059203.1 | zincin-like metallopeptidase domain-containing protein | - |
| NAL19_RS06855 (NAL19_1474) | 1570108..1570344 | + | 237 | WP_029729596.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| NAL19_RS06860 (NAL19_1475) | 1570347..1570661 | + | 315 | WP_263059204.1 | CcdB family protein | Toxin Detail |
| NAL19_RS06865 (NAL19_1477) | 1571172..1572341 | + | 1170 | WP_263059205.1 | hypothetical protein | - |
| NAL19_RS06870 (NAL19_1478) | 1572577..1573719 | + | 1143 | WP_263059206.1 | reverse transcriptase family protein | - |
| NAL19_RS06875 (NAL19_1479) | 1574241..1578077 | - | 3837 | WP_263059207.1 | DNA-binding protein | - |
| NAL19_RS06880 (NAL19_1480) | 1578524..1579270 | - | 747 | WP_263059208.1 | MobC family replication-relaxation protein | - |
| NAL19_RS06885 (NAL19_1481) | 1579279..1581141 | - | 1863 | WP_263059209.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NAL19_RS06890 (NAL19_1483) | 1581866..1582168 | - | 303 | WP_263059210.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| NAL19_RS06895 (NAL19_1484) | 1582212..1583228 | - | 1017 | WP_263059211.1 | Type IV secretion system protein VirB11 | VF |
| NAL19_RS06900 (NAL19_1485) | 1583218..1584450 | - | 1233 | WP_263059212.1 | hypothetical protein | VF |
| NAL19_RS06905 (NAL19_1486) | 1584447..1585340 | - | 894 | WP_263059213.1 | P-type conjugative transfer protein VirB9 | - |
| NAL19_RS06910 (NAL19_1487) | 1585337..1586020 | - | 684 | WP_263059214.1 | Type IV secretion system protein PtlE | VF |
| NAL19_RS06915 (NAL19_1488) | 1586013..1586153 | - | 141 | WP_263059215.1 | hypothetical protein | - |
| NAL19_RS06920 (NAL19_1489) | 1586241..1587281 | - | 1041 | WP_263059216.1 | type IV secretion system protein | - |
| NAL19_RS06925 (NAL19_1490) | 1587293..1587517 | - | 225 | WP_226509882.1 | EexN family lipoprotein | - |
| NAL19_RS06930 (NAL19_1491) | 1587528..1588244 | - | 717 | WP_263059217.1 | type IV secretion system protein | - |
| NAL19_RS06935 (NAL19_1492) | 1588268..1591015 | - | 2748 | WP_263059218.1 | Type IV secretion system protein virB4 | VF |
| NAL19_RS06940 (NAL19_1493) | 1591025..1591306 | - | 282 | WP_086002448.1 | TrbC/VirB2 family protein | - |
| NAL19_RS06945 (NAL19_1494) | 1591303..1591968 | - | 666 | WP_263059219.1 | hypothetical protein | VF |
| NAL19_RS06950 (NAL19_1495) | 1592042..1592263 | - | 222 | WP_263059220.1 | hypothetical protein | - |
| NAL19_RS06955 (NAL19_1497) | 1592945..1593388 | + | 444 | WP_263059221.1 | dNTP triphosphohydrolase | - |
| NAL19_RS06960 | 1593385..1594228 | - | 844 | Protein_1349 | IS5 family transposase | - |
| NAL19_RS06965 (NAL19_1499) | 1594255..1595229 | + | 975 | WP_263059222.1 | dGTPase | - |
| NAL19_RS06970 (NAL19_1500) | 1595692..1595907 | - | 216 | WP_263059223.1 | transposase | - |
| NAL19_RS06975 (NAL19_1501) | 1596310..1596519 | - | 210 | WP_103158133.1 | TraR/DksA family transcriptional regulator | - |
| NAL19_RS06980 (NAL19_1502) | 1596509..1597093 | - | 585 | WP_181847873.1 | DUF2857 domain-containing protein | - |
| NAL19_RS06985 (NAL19_1503) | 1597110..1597304 | - | 195 | WP_024108950.1 | AlpA family transcriptional regulator | - |
| NAL19_RS06990 (NAL19_1504) | 1597458..1598372 | - | 915 | WP_181847874.1 | hypothetical protein | - |
| NAL19_RS06995 (NAL19_1505) | 1598785..1599057 | - | 273 | WP_263059224.1 | helix-turn-helix transcriptional regulator | - |
| NAL19_RS07000 (NAL19_1506) | 1599266..1600306 | - | 1041 | WP_263059225.1 | IS630 family transposase IS630 | Transposase |
| NAL19_RS07005 (NAL19_1507) | 1600391..1600672 | + | 282 | WP_263059675.1 | helix-turn-helix transcriptional regulator | - |
| NAL19_RS07010 (NAL19_1508) | 1600858..1601172 | + | 315 | WP_025918867.1 | helix-turn-helix transcriptional regulator | - |
| NAL19_RS07015 (NAL19_1509) | 1601306..1602577 | - | 1272 | WP_263059226.1 | Prophage integrase IntS ; Integrase | Integrase |
| NAL19_RS07025 (NAL19_1510) | 1602957..1604219 | - | 1263 | WP_263059227.1 | MFS transporter | - |
| NAL19_RS07030 (NAL19_1511) | 1604410..1607541 | - | 3132 | WP_263059228.1 | beta-galactosidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|