MGE detailed information
MGE type: Genomic_island MGE length: 32413 bp
Accession: NZ_CP104681 Location: 4227027..4259439 Organism: Escherichia coli strain 2022CK-00450 Replicon: chromosome
Accession: NZ_CP104681 Location: 4227027..4259439 Organism: Escherichia coli strain 2022CK-00450 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5922_RS20805 (4223558) | 4223558..4224283 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| N5922_RS20810 (4224320) | 4224320..4224859 | - | 540 | WP_000824105.1 | fimbrial protein | - |
| N5922_RS20815 (4224924) | 4224924..4225472 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| N5922_RS20820 (4225953) | 4225953..4226549 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| N5922_RS20825 (4227027) | 4227027..4227629 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| N5922_RS20830 (4229085) | 4229085..4229801 | + | 717 | WP_072002294.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| N5922_RS20835 (4229821) | 4229821..4230927 | + | 1107 | WP_029403685.1 | N-acetylneuraminate epimerase | - |
| N5922_RS20840 (4230992) | 4230992..4231972 | + | 981 | WP_000338801.1 | sialate O-acetylesterase | - |
| N5922_RS20845 (4231980) | 4231980..4232630 | - | 651 | WP_001037977.1 | HNH endonuclease | - |
| N5922_RS20850 (4232767) | 4232767..4232910 | + | 144 | Protein_4084 | HNH endonuclease | - |
| N5922_RS20855 (4233009) | 4233009..4233194 | + | 186 | WP_000066585.1 | hypothetical protein | - |
| N5922_RS20860 (4233552) | 4233552..4234349 | - | 798 | WP_053919267.1 | hypothetical protein | VF |
| N5922_RS20865 (4234464) | 4234464..4234739 | - | 276 | WP_023220446.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N5922_RS20870 (4234743) | 4234743..4234991 | - | 249 | WP_261587084.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| N5922_RS20875 (4235067) | 4235067..4235909 | - | 843 | WP_048963608.1 | DUF4942 domain-containing protein | - |
| N5922_RS20880 (4236022) | 4236022..4236372 | - | 351 | WP_053087800.1 | DUF5983 family protein | - |
| N5922_RS20885 (4236399) | 4236399..4236575 | - | 177 | Protein_4091 | DUF5983 family protein | - |
| N5922_RS20890 (4236566) | 4236566..4236940 | - | 375 | WP_023220442.1 | TA system toxin CbtA family protein | - |
| N5922_RS20895 (4236986) | 4236986..4237633 | - | 648 | WP_048963607.1 | hypothetical protein | - |
| N5922_RS20900 (4237630) | 4237630..4238001 | - | 372 | WP_048963606.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| N5922_RS20905 (4237973) | 4237973..4238341 | - | 369 | WP_023220439.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| N5922_RS20910 (4238359) | 4238359..4238580 | - | 222 | WP_048963605.1 | DUF987 family protein | - |
| N5922_RS20915 (4238577) | 4238577..4238867 | - | 291 | WP_048963604.1 | hypothetical protein | - |
| N5922_RS20920 (4238883) | 4238883..4239362 | - | 480 | WP_048963603.1 | DNA repair protein RadC | - |
| N5922_RS20925 (4239373) | 4239373..4239813 | - | 441 | WP_261588726.1 | antirestriction protein | - |
| N5922_RS20930 (4239931) | 4239931..4240314 | - | 384 | WP_000522007.1 | hypothetical protein | - |
| N5922_RS20935 (4240492) | 4240492..4240713 | - | 222 | WP_261587117.1 | hypothetical protein | - |
| N5922_RS20940 (4240720) | 4240720..4241538 | - | 819 | WP_048963600.1 | DUF932 domain-containing protein | - |
| N5922_RS20945 (4241637) | 4241637..4241868 | - | 232 | Protein_4103 | DUF905 domain-containing protein | - |
| N5922_RS20950 (4241940) | 4241940..4242389 | - | 450 | WP_048963599.1 | IrmA family protein | - |
| N5922_RS20955 (4242386) | 4242386..4242841 | - | 456 | WP_000754598.1 | hypothetical protein | - |
| N5922_RS20960 (4242880) | 4242880..4243515 | - | 636 | WP_020837117.1 | hypothetical protein | - |
| N5922_RS20965 (4243512) | 4243512..4244225 | - | 714 | WP_048963598.1 | WYL domain-containing protein | - |
| N5922_RS20970 (4244486) | 4244486..4245361 | - | 876 | WP_048963597.1 | GTPase family protein | - |
| N5922_RS20975 (4245484) | 4245484..4246551 | - | 1068 | WP_048963596.1 | hypothetical protein | - |
| N5922_RS20980 (4247011) | 4247011..4247217 | + | 207 | WP_023564418.1 | AlpA family transcriptional regulator | - |
| N5922_RS20985 (4247315) | 4247315..4247908 | + | 594 | WP_023063466.1 | hypothetical protein | - |
| N5922_RS20990 (4248112) | 4248112..4248681 | + | 570 | WP_261587129.1 | inovirus Gp2 family protein | - |
| N5922_RS20995 (4248861) | 4248861..4249283 | + | 423 | WP_023063468.1 | putative zinc ribbon protein | - |
| N5922_RS21000 (4249271) | 4249271..4249685 | + | 415 | Protein_4114 | zinc-ribbon domain-containing protein | - |
| N5922_RS21005 (4250350) | 4250350..4250937 | + | 588 | WP_023564423.1 | hypothetical protein | - |
| N5922_RS21010 (4250979) | 4250979..4252586 | + | 1608 | WP_023063472.1 | type I restriction-modification system subunit M | - |
| N5922_RS21015 (4252586) | 4252586..4253815 | + | 1230 | WP_023063473.1 | restriction endonuclease subunit S | - |
| N5922_RS21020 (4253874) | 4253874..4256789 | + | 2916 | WP_023063474.1 | type I restriction endonuclease subunit R | - |
| N5922_RS21025 (4256924) | 4256924..4257490 | + | 567 | WP_023564424.1 | hypothetical protein | - |
| N5922_RS21030 (4257487) | 4257487..4258317 | + | 831 | WP_023564425.1 | hypothetical protein | - |
| N5922_RS21035 (4258459) | 4258459..4259439 | + | 981 | WP_044723340.1 | IS5 family transposase IS5D | Transposase |
| N5922_RS21040 (4259855) | 4259855..4261126 | - | 1272 | WP_023220419.1 | integrase arm-type DNA-binding domain-containing protein | - |
| N5922_RS21050 (4261607) | 4261607..4262626 | + | 1020 | WP_029403688.1 | NADPH-dependent aldehyde reductase Ahr | - |
| N5922_RS21055 (4262756) | 4262756..4264258 | + | 1503 | WP_016241802.1 | DUF853 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|