MGE detailed information
MGE type: Prophage MGE length: 47262 bp
Accession: NZ_CP104681 Location: 3786147..3833408 Organism: Escherichia coli strain 2022CK-00450 Replicon: chromosome
Accession: NZ_CP104681 Location: 3786147..3833408 Organism: Escherichia coli strain 2022CK-00450 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5922_RS18525 (3782125) | 3782125..3783276 | + | 1152 | WP_175190565.1 | trypsin-like peptidase domain-containing protein | - |
| N5922_RS18530 (3783501) | 3783501..3784070 | - | 570 | Protein_3631 | IS5 family transposase | - |
| N5922_RS18535 (3785192) | 3785192..3786055 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| N5922_RS18540 (3786147) | 3786147..3786968 | + | 822 | WP_000197387.1 | DUF932 domain-containing protein | - |
| N5922_RS18545 (3787185) | 3787185..3787886 | + | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| N5922_RS18550 (3787927) | 3787927..3788163 | + | 237 | WP_001144031.1 | protein YpjK | - |
| N5922_RS18555 (3788163) | 3788163..3788606 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| N5922_RS18560 (3788629) | 3788629..3789096 | + | 468 | WP_001385283.1 | protein YkfB | - |
| N5922_RS18565 (3789173) | 3789173..3789412 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| N5922_RS18570 (3789510) | 3789510..3789968 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| N5922_RS18575 (3789984) | 3789984..3790460 | + | 477 | WP_000811693.1 | RadC family protein | - |
| N5922_RS18580 (3790469) | 3790469..3790690 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| N5922_RS18585 (3790709) | 3790709..3791026 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| N5922_RS18590 (3791047) | 3791047..3791388 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| N5922_RS18595 (3792054) | 3792054..3792263 | + | 210 | Protein_3644 | IS3 family transposase ISEc48 | Transposase |
| N5922_RS18600 (3792305) | 3792305..3793048 | - | 744 | WP_089584665.1 | AraC family transcriptional regulator | - |
| N5922_RS18605 (3793449) | 3793449..3794429 | - | 981 | WP_000019441.1 | IS5 family transposase ISKpn26 | Transposase |
| N5922_RS18610 (3794500) | 3794500..3794931 | + | 432 | Protein_3647 | phage tail protein | - |
| N5922_RS18615 (3794931) | 3794931..3795524 | + | 594 | WP_000805549.1 | tail fiber assembly protein | - |
| N5922_RS18620 (3795496) | 3795496..3795933 | - | 438 | WP_032173814.1 | tail assembly chaperone | - |
| N5922_RS18625 (3796376) | 3796376..3796672 | - | 297 | Protein_3650 | hypothetical protein | - |
| N5922_RS18630 (3796676) | 3796676..3797260 | - | 585 | Protein_3651 | YmfQ family protein | - |
| N5922_RS18635 (3797251) | 3797251..3798309 | - | 1059 | WP_068868357.1 | baseplate J/gp47 family protein | - |
| N5922_RS18640 (3798296) | 3798296..3798721 | - | 426 | WP_122989376.1 | phage GP46 family protein | - |
| N5922_RS18645 (3798721) | 3798721..3799269 | - | 549 | WP_032180879.1 | phage baseplate assembly protein V | - |
| N5922_RS18650 (3799269) | 3799269..3800348 | - | 1080 | WP_032180881.1 | baseplate protein | - |
| N5922_RS18655 (3800345) | 3800345..3801673 | - | 1329 | WP_032180883.1 | DNA circularization N-terminal domain-containing protein | - |
| N5922_RS18660 (3801735) | 3801735..3802265 | - | 531 | WP_000679479.1 | hypothetical protein | - |
| N5922_RS18665 (3802357) | 3802357..3804189 | - | 1833 | WP_032180884.1 | phage tail tape measure protein | - |
| N5922_RS18670 (3804331) | 3804331..3804600 | - | 270 | WP_000661047.1 | phage tail assembly protein | - |
| N5922_RS18675 (3804600) | 3804600..3804956 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| N5922_RS18680 (3804956) | 3804956..3806452 | - | 1497 | WP_032173804.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| N5922_RS18685 (3806436) | 3806436..3806606 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| N5922_RS18690 (3806615) | 3806615..3807175 | - | 561 | WP_032173802.1 | hypothetical protein | - |
| N5922_RS18695 (3807172) | 3807172..3807678 | - | 507 | WP_000224835.1 | hypothetical protein | - |
| N5922_RS18700 (3807653) | 3807653..3808063 | - | 411 | WP_001579916.1 | phage head closure protein | - |
| N5922_RS18705 (3808060) | 3808060..3808383 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| N5922_RS18710 (3808386) | 3808386..3808586 | - | 201 | WP_000601365.1 | hypothetical protein | - |
| N5922_RS18715 (3808636) | 3808636..3809841 | - | 1206 | WP_032173801.1 | phage major capsid protein | - |
| N5922_RS18720 (3809856) | 3809856..3810506 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| N5922_RS18725 (3810484) | 3810484..3811725 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| N5922_RS18730 (3811725) | 3811725..3811907 | - | 183 | WP_000605606.1 | protein YmfR | - |
| N5922_RS18735 (3811919) | 3811919..3813652 | - | 1734 | WP_000088153.1 | terminase large subunit | - |
| N5922_RS18740 (3813649) | 3813649..3814143 | - | 495 | WP_024221344.1 | phage terminase small subunit P27 family | - |
| N5922_RS18745 (3814269) | 3814269..3814619 | - | 351 | WP_053274864.1 | HNH endonuclease signature motif containing protein | - |
| N5922_RS18750 (3815145) | 3815145..3815438 | + | 294 | WP_000738423.1 | increased serum survival lipoprotein Iss | - |
| N5922_RS18755 (3815529) | 3815529..3815711 | - | 183 | WP_001228695.1 | prophage lysis lipoprotein RzoD | - |
| N5922_RS18760 (3815928) | 3815928..3816404 | - | 477 | WP_001697322.1 | glycoside hydrolase family protein | - |
| N5922_RS18765 (3816391) | 3816391..3816696 | - | 306 | WP_000544528.1 | phage holin family protein | - |
| N5922_RS18770 (3817018) | 3817018..3817707 | - | 690 | WP_089584731.1 | bacteriophage antitermination protein Q | - |
| N5922_RS18775 (3817704) | 3817704..3817844 | - | 141 | WP_000971093.1 | YlcG family protein | - |
| N5922_RS18780 (3817841) | 3817841..3818203 | - | 363 | WP_044803951.1 | crossover junction endodeoxyribonuclease RusA | - |
| N5922_RS18785 (3818200) | 3818200..3818490 | - | 291 | WP_032176362.1 | DUF1364 domain-containing protein | - |
| N5922_RS18790 (3818483) | 3818483..3818653 | - | 171 | WP_000224907.1 | NinE family protein | - |
| N5922_RS18795 (3818653) | 3818653..3819108 | - | 456 | WP_089584732.1 | DNA base-flipping protein YbcN | - |
| N5922_RS18800 (3819105) | 3819105..3819206 | - | 102 | WP_072716667.1 | hypothetical protein | - |
| N5922_RS18805 (3819735) | 3819735..3820847 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| N5922_RS18810 (3820898) | 3820898..3821200 | - | 303 | WP_173671631.1 | hypothetical protein | - |
| N5922_RS18815 (3821214) | 3821214..3821460 | - | 247 | Protein_3688 | DNA polymerase III subunit theta | - |
| N5922_RS18820 (3821481) | 3821481..3821681 | - | 201 | WP_021567492.1 | hypothetical protein | - |
| N5922_RS18825 (3821844) | 3821844..3822452 | - | 609 | WP_021567493.1 | P22AR C-terminal domain-containing protein | - |
| N5922_RS18830 (3823200) | 3823200..3823547 | + | 348 | WP_000152742.1 | hypothetical protein | - |
| N5922_RS18835 (3823752) | 3823752..3824453 | - | 702 | WP_089584654.1 | replication protein P | - |
| N5922_RS18840 (3824450) | 3824450..3825469 | - | 1020 | WP_023147422.1 | replication protein | - |
| N5922_RS18845 (3825466) | 3825466..3826005 | - | 540 | WP_001182882.1 | toxin YdaT domain-containing protein | - |
| N5922_RS18850 (3826036) | 3826036..3826263 | - | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| N5922_RS18855 (3826374) | 3826374..3827066 | + | 693 | WP_001295669.1 | helix-turn-helix transcriptional regulator | - |
| N5922_RS18860 (3827216) | 3827216..3827395 | + | 180 | WP_071788701.1 | hypothetical protein | - |
| N5922_RS18865 (3827358) | 3827358..3828215 | + | 858 | WP_053265961.1 | hypothetical protein | - |
| N5922_RS18870 (3828722) | 3828722..3828928 | + | 207 | WP_089584655.1 | cell division inhibitor protein | - |
| N5922_RS18875 (3829004) | 3829004..3829300 | + | 297 | WP_000995455.1 | host-nuclease inhibitor Gam family protein | - |
| N5922_RS18880 (3829306) | 3829306..3830091 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| N5922_RS18885 (3830088) | 3830088..3830768 | + | 681 | WP_000186798.1 | YqaJ viral recombinase family protein | - |
| N5922_RS18890 (3830765) | 3830765..3830947 | + | 183 | WP_000149539.1 | DUF1317 domain-containing protein | - |
| N5922_RS18895 (3830920) | 3830920..3831111 | + | 192 | WP_089584656.1 | DUF1382 family protein | - |
| N5922_RS18900 (3831188) | 3831188..3831403 | + | 216 | WP_000188870.1 | hypothetical protein | - |
| N5922_RS18905 (3831502) | 3831502..3831720 | + | 219 | WP_044190299.1 | TraR/DksA family transcriptional regulator | - |
| N5922_RS18910 (3831768) | 3831768..3832046 | + | 279 | WP_000488419.1 | DUF4222 domain-containing protein | - |
| N5922_RS18915 (3832018) | 3832018..3832368 | + | 351 | WP_122989367.1 | helix-turn-helix domain-containing protein | - |
| N5922_RS18920 (3832269) | 3832269..3833408 | + | 1140 | WP_244569785.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| N5922_RS18930 (3833613) | 3833613..3834866 | - | 1254 | WP_016241902.1 | glutamate-5-semialdehyde dehydrogenase | - |
| N5922_RS18935 (3834878) | 3834878..3835981 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| N5922_RS18940 (3836269) | 3836269..3837324 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| N5922_RS18945 (3837363) | 3837363..3837764 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|