MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 66556 bp
Accession: NZ_CP104665 Location: 848478..915033 Organism: Escherichia coli strain 2021CK-00607 Replicon: chromosome
Accession: NZ_CP104665 Location: 848478..915033 Organism: Escherichia coli strain 2021CK-00607 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5914_RS03985 (845080) | 845080..846228 | - | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| N5914_RS03990 (846300) | 846300..847283 | - | 984 | WP_001296394.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| N5914_RS03995 (848093) | 848093..848263 | - | 171 | Protein_785 | IS110 family transposase | - |
| N5914_RS04000 (848605) | 848605..849447 | - | 843 | Protein_786 | DUF4942 domain-containing protein | - |
| N5914_RS04005 (849532) | 849532..849726 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| N5914_RS04010 (849805) | 849805..849954 | - | 150 | Protein_788 | DUF5983 family protein | - |
| N5914_RS04015 (849951) | 849951..850328 | - | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| N5914_RS04020 (850418) | 850418..850786 | - | 369 | WP_038432125.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| N5914_RS04025 (850949) | 850949..851170 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| N5914_RS04030 (851235) | 851235..851711 | - | 477 | WP_001186774.1 | RadC family protein | - |
| N5914_RS04035 (851727) | 851727..852206 | - | 480 | WP_033869257.1 | antirestriction protein | - |
| N5914_RS04040 (852472) | 852472..853290 | - | 819 | WP_001175165.1 | DUF932 domain-containing protein | - |
| N5914_RS04045 (853380) | 853380..853613 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| N5914_RS04050 (853619) | 853619..854296 | - | 678 | WP_001564058.1 | hypothetical protein | - |
| N5914_RS04055 (854447) | 854447..855127 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| N5914_RS04060 (855330) | 855330..856214 | - | 885 | WP_001564055.1 | YfjP family GTPase | - |
| N5914_RS04065 (856315) | 856315..857538 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| N5914_RS04070 (858701) | 858701..859231 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| N5914_RS04075 (859901) | 859901..860632 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| N5914_RS04080 (861153) | 861153..861605 | + | 453 | WP_000558152.1 | acyltransferase | - |
| N5914_RS04085 (862141) | 862141..863076 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| N5914_RS04090 (863069) | 863069..864004 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| N5914_RS04095 (864088) | 864088..865338 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| N5914_RS04100 (865357) | 865357..866451 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| N5914_RS04105 (867752) | 867752..868318 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| N5914_RS04110 (868576) | 868576..869151 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| N5914_RS04115 (869220) | 869220..869453 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| N5914_RS04120 (869450) | 869450..869575 | + | 126 | WP_001342704.1 | hypothetical protein | - |
| N5914_RS04125 (869704) | 869704..869766 | + | 63 | Protein_811 | IS3 family transposase IS2 | Transposase |
| N5914_RS04130 (869752) | 869752..870018 | - | 267 | Protein_812 | IS3 family transposase IS2 | Transposase |
| N5914_RS04135 (870109) | 870109..871266 | + | 1158 | Protein_813 | Multidrug resistance protein MexB | VF |
| N5914_RS04140 (871366) | 871366..872037 | + | 672 | WP_223350500.1 | TetR/AcrR family transcriptional regulator | - |
| N5914_RS04145 (872168) | 872168..872353 | + | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| N5914_RS04150 (872710) | 872710..873255 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| N5914_RS04155 (873300) | 873300..874451 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| N5914_RS04160 (874580) | 874580..875635 | - | 1056 | WP_001564046.1 | HTH-type transcriptional activator RhaR | VF |
| N5914_RS04165 (875652) | 875652..876914 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| N5914_RS04170 (877530) | 877530..878051 | - | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| N5914_RS04175 (878079) | 878079..878618 | - | 540 | WP_001564045.1 | hypothetical protein | - |
| N5914_RS04180 (879104) | 879104..880009 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| N5914_RS04185 (880146) | 880146..881063 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| N5914_RS04190 (881172) | 881172..883724 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| N5914_RS04195 (883773) | 883773..884348 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| N5914_RS04200 (884359) | 884359..884658 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| N5914_RS04205 (884682) | 884682..886199 | - | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| N5914_RS04210 (886260) | 886260..887045 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| N5914_RS04215 (887067) | 887067..887348 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| N5914_RS04220 (887633) | 887633..888829 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| N5914_RS04225 (888858) | 888858..889355 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| N5914_RS04230 (889383) | 889383..889652 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| N5914_RS04235 (889664) | 889664..890389 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| N5914_RS04240 (890373) | 890373..891131 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| N5914_RS04245 (891186) | 891186..891872 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| N5914_RS04250 (892012) | 892012..893130 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| N5914_RS04255 (893487) | 893487..893987 | + | 501 | Protein_837 | DNA-binding protein | - |
| N5914_RS04260 (894083) | 894083..894316 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| N5914_RS04265 (894369) | 894369..894560 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| N5914_RS04270 (895281) | 895281..895541 | + | 261 | Protein_840 | IS3 family transposase ISLad1 | Transposase |
| N5914_RS04275 (895684) | 895684..897189 | + | 1506 | Protein_841 | NERD domain-containing protein | - |
| N5914_RS04285 (898448) | 898448..898690 | + | 243 | Protein_843 | ATP-binding domain-containing protein | - |
| N5914_RS04290 (898846) | 898846..899032 | + | 187 | Protein_844 | hypothetical protein | - |
| N5914_RS04295 (899084) | 899084..899263 | + | 180 | Protein_845 | hypothetical protein | VF |
| N5914_RS04300 (899260) | 899260..899673 | + | 414 | Protein_846 | group II intron reverse transcriptase/maturase | - |
| N5914_RS04305 (899757) | 899757..900236 | + | 480 | Protein_847 | IS3 family transposase IS629 | Transposase |
| N5914_RS04310 (900248) | 900248..900421 | + | 174 | Protein_848 | hypothetical protein | - |
| N5914_RS04315 (900434) | 900434..900691 | - | 258 | Protein_849 | IS3 family transposase IS911 | Transposase |
| N5914_RS04320 (900764) | 900764..901108 | - | 345 | Protein_850 | alcohol dehydrogenase catalytic domain-containing protein | - |
| N5914_RS04325 (901726) | 901726..902419 | - | 694 | Protein_851 | IS1 family transposase | - |
| N5914_RS04330 (902672) | 902672..904141 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| N5914_RS04335 (904246) | 904246..906615 | + | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| N5914_RS04340 (906690) | 906690..908189 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| N5914_RS04345 (908332) | 908332..909029 | + | 698 | WP_224053098.1 | IS1 family transposase IS1S | Transposase |
| N5914_RS04350 (909496) | 909496..910047 | - | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| N5914_RS04355 (910214) | 910214..911005 | - | 792 | Protein_857 | IS3 family transposase | - |
| N5914_RS04365 (912249) | 912249..913292 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| N5914_RS04370 (913548) | 913548..914813 | - | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| N5914_RS04380 (915192) | 915192..915899 | - | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| N5914_RS04385 (916052) | 916052..916129 | + | 78 | WP_212734103.1 | hypothetical protein | - |
| N5914_RS04390 (916292) | 916292..918427 | + | 2136 | WP_022646105.1 | ornithine decarboxylase | - |
| N5914_RS04395 (918476) | 918476..919732 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|