MGE detailed information
MGE type: Genomic_island MGE length: 17744 bp
Accession: NZ_CP104665 Location: 4373076..4390819 Organism: Escherichia coli strain 2021CK-00607 Replicon: chromosome
Accession: NZ_CP104665 Location: 4373076..4390819 Organism: Escherichia coli strain 2021CK-00607 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5914_RS21005 (4369606) | 4369606..4370331 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| N5914_RS21010 (4370368) | 4370368..4370907 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| N5914_RS21015 (4370972) | 4370972..4371520 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| N5914_RS21020 (4372002) | 4372002..4372598 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| N5914_RS21025 (4373076) | 4373076..4373678 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| N5914_RS21030 (4375134) | 4375134..4375850 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| N5914_RS21035 (4375870) | 4375870..4376976 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| N5914_RS21040 (4377041) | 4377041..4378021 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| N5914_RS21045 (4378131) | 4378131..4378336 | + | 206 | Protein_4125 | HNH endonuclease | - |
| N5914_RS21050 (4378636) | 4378636..4379616 | - | 981 | WP_000019400.1 | IS5 family transposase IS5D | Transposase |
| N5914_RS21055 (4379803) | 4379803..4381043 | - | 1241 | Protein_4127 | helicase YjhR | - |
| N5914_RS21060 (4381159) | 4381159..4381290 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| N5914_RS21065 (4381781) | 4381781..4382038 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| N5914_RS21070 (4382050) | 4382050..4382595 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| N5914_RS21075 (4382651) | 4382651..4383397 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| N5914_RS21080 (4383566) | 4383566..4383784 | + | 219 | Protein_4132 | hypothetical protein | - |
| N5914_RS21085 (4383822) | 4383822..4383938 | + | 117 | Protein_4133 | VOC family protein | - |
| N5914_RS21090 (4384183) | 4384183..4385304 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| N5914_RS21095 (4385301) | 4385301..4385579 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| N5914_RS21100 (4385591) | 4385591..4386904 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| N5914_RS21105 (4386917) | 4386917..4387723 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| N5914_RS21110 (4387854) | 4387854..4388285 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| N5914_RS21115 (4388297) | 4388297..4388929 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| N5914_RS21120 (4388946) | 4388946..4389728 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| N5914_RS21125 (4390031) | 4390031..4390819 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| N5914_RS21130 (4390824) | 4390824..4391729 | + | 906 | WP_039052569.1 | dihydrodipicolinate synthase family protein | - |
| N5914_RS21135 (4391740) | 4391740..4393707 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| N5914_RS21140 (4393814) | 4393814..4395163 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|