MGE detailed information
MGE type: Genomic_island MGE length: 41193 bp
Accession: NZ_CP104651 Location: 2707250..2748442 Organism: Acinetobacter variabilis strain 2021CK-01005 Replicon: chromosome
Accession: NZ_CP104651 Location: 2707250..2748442 Organism: Acinetobacter variabilis strain 2021CK-01005 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5980_RS13115 (N5980_13105) | 2702955..2703767 | + | 813 | WP_005232235.1 | prolipoprotein diacylglyceryl transferase | - |
| N5980_RS13120 (N5980_13110) | 2703857..2704249 | + | 393 | WP_005232248.1 | hypothetical protein | - |
| N5980_RS13125 (N5980_13115) | 2704242..2704628 | + | 387 | WP_005232249.1 | hypothetical protein | - |
| N5980_RS13130 (N5980_13120) | 2704678..2705223 | - | 546 | WP_004781961.1 | CHAP domain-containing protein | - |
| N5980_RS13135 (N5980_13125) | 2705612..2706103 | + | 492 | WP_005232256.1 | lipocalin family protein | - |
| N5980_RS13140 (N5980_13130) | 2706275..2706838 | + | 564 | Protein_2531 | thymidylate synthase | - |
| N5980_RS13145 (N5980_13135) | 2707250..2708485 | + | 1236 | WP_179992414.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| N5980_RS13150 (N5980_13140) | 2708482..2709411 | + | 930 | WP_261635033.1 | hypothetical protein | - |
| N5980_RS13155 (N5980_13145) | 2709478..2709906 | + | 429 | WP_101442323.1 | IS66 family transposase ISAba17 | Transposase |
| N5980_RS13160 (N5980_13150) | 2709903..2710238 | + | 336 | WP_101442324.1 | IS66 family transposase ISAba25 | Transposase |
| N5980_RS13165 (N5980_13155) | 2710313..2711938 | + | 1626 | WP_261635035.1 | IS66 family transposase ISAba16 | Transposase |
| N5980_RS13170 (N5980_13160) | 2711895..2713085 | + | 1191 | WP_261635036.1 | hypothetical protein ; Integrase | Integrase |
| N5980_RS13175 (N5980_13165) | 2713105..2714133 | + | 1029 | WP_261635003.1 | IS701 family transposase ISAba11 | Transposase |
| N5980_RS13180 (N5980_13170) | 2714309..2714545 | + | 237 | WP_261635037.1 | hypothetical protein | - |
| N5980_RS13185 (N5980_13175) | 2714545..2716656 | + | 2112 | WP_228413711.1 | hypothetical protein ; Integrase | Integrase |
| N5980_RS13190 (N5980_13180) | 2716653..2717165 | + | 513 | WP_180052443.1 | hypothetical protein | - |
| N5980_RS13195 (N5980_13185) | 2717247..2718080 | - | 834 | WP_261635039.1 | thymidylate synthase | - |
| N5980_RS13200 (N5980_13190) | 2718281..2720194 | - | 1914 | WP_100355640.1 | ATP-dependent helicase | - |
| N5980_RS13205 (N5980_13195) | 2720196..2722019 | - | 1824 | WP_100355639.1 | AAA family ATPase | - |
| N5980_RS13210 (N5980_13200) | 2722045..2725494 | - | 3450 | WP_261635040.1 | DEAD/DEAH box helicase family protein | - |
| N5980_RS13215 (N5980_13205) | 2725549..2726298 | - | 750 | WP_213702764.1 | DUF4850 domain-containing protein | - |
| N5980_RS13220 (N5980_13210) | 2726313..2727491 | - | 1179 | WP_213702763.1 | restriction endonuclease subunit S | - |
| N5980_RS13225 (N5980_13215) | 2727488..2728165 | - | 678 | Protein_2548 | N-6 DNA methylase | - |
| N5980_RS13235 (N5980_13225) | 2729369..2730184 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| N5980_RS13240 (N5980_13230) | 2730271..2730573 | + | 303 | WP_000251875.1 | phosphoglucosamine mutase | - |
| N5980_RS13245 (N5980_13235) | 2730749..2732242 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| N5980_RS13250 (N5980_13240) | 2732354..2732659 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| N5980_RS13255 (N5980_13245) | 2732687..2733901 | - | 1215 | WP_000214119.1 | Bicyclomycin resistance protein | ARG |
| N5980_RS13260 (N5980_13250) | 2734118..2735002 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| N5980_RS13265 (N5980_13255) | 2735033..2735863 | - | 831 | Protein_2556 | IS91 family transposase ISVsa3 | Transposase |
| N5980_RS13270 (N5980_13260) | 2735927..2736631 | + | 705 | WP_001067784.1 | IS6 family transposase IS1006 | Transposase |
| N5980_RS13275 (N5980_13265) | 2736685..2736813 | + | 129 | Protein_2558 | RepB family plasmid replication initiator protein | - |
| N5980_RS13280 (N5980_13270) | 2736806..2737360 | + | 555 | WP_136144359.1 | plasmid replication DNA-binding protein | - |
| N5980_RS13285 (N5980_13275) | 2737373..2737516 | + | 144 | WP_171476913.1 | hypothetical protein | - |
| N5980_RS13290 (N5980_13280) | 2737700..2738125 | - | 426 | WP_065995587.1 | DUF6530 family protein | - |
| N5980_RS13295 (N5980_13285) | 2738779..2739009 | + | 231 | WP_104427085.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N5980_RS13300 (N5980_13290) | 2739006..2739401 | + | 396 | WP_140948450.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N5980_RS13305 (N5980_13295) | 2739483..2740151 | - | 669 | WP_213702720.1 | hypothetical protein | - |
| N5980_RS13310 (N5980_13300) | 2740114..2740773 | + | 660 | Protein_2565 | ATP-binding protein | - |
| N5980_RS13315 (N5980_13305) | 2740878..2741699 | - | 822 | WP_085562421.1 | Beta-lactamase OXA-133 | ARG |
| N5980_RS13320 (N5980_13310) | 2741805..2742895 | + | 1091 | WP_085940648.1 | IS4 family transposase ISAba1 | Transposase |
| N5980_RS13325 (N5980_13315) | 2742924..2743721 | - | 798 | Protein_2568 | class I SAM-dependent DNA methyltransferase | - |
| N5980_RS13330 (N5980_13320) | 2743807..2744421 | - | 615 | WP_168406717.1 | DUF6088 family protein | - |
| N5980_RS13335 (N5980_13325) | 2744738..2745073 | + | 336 | WP_005103071.1 | helix-turn-helix transcriptional regulator | - |
| N5980_RS13340 (N5980_13330) | 2745117..2745323 | - | 207 | WP_005103069.1 | helix-turn-helix transcriptional regulator | - |
| N5980_RS13345 (N5980_13335) | 2745418..2745927 | + | 510 | WP_005103068.1 | hypothetical protein | - |
| N5980_RS13350 (N5980_13340) | 2746038..2746172 | + | 135 | WP_257219750.1 | hypothetical protein | - |
| N5980_RS13355 (N5980_13345) | 2746232..2747800 | + | 1569 | WP_213702180.1 | hypothetical protein | - |
| N5980_RS13360 (N5980_13350) | 2747831..2748442 | + | 612 | WP_179993110.1 | HAD family hydrolase | - |
| N5980_RS13365 (N5980_13355) | 2748620..2748904 | + | 285 | Protein_2576 | thymidylate synthase | - |
| N5980_RS13370 (N5980_13360) | 2749003..2749515 | + | 513 | WP_005232285.1 | dihydrofolate reductase | - |
| N5980_RS13375 (N5980_13365) | 2749542..2750588 | + | 1047 | WP_005232289.1 | DUF4105 domain-containing protein | - |
| N5980_RS13380 (N5980_13370) | 2750692..2751153 | + | 462 | WP_005232292.1 | META domain-containing protein | - |
| N5980_RS13385 (N5980_13375) | 2751252..2751776 | + | 525 | WP_004781907.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| N5980_RS13390 (N5980_13380) | 2751866..2752270 | - | 405 | WP_004781905.1 | biopolymer transporter ExbD | - |
| N5980_RS13395 (N5980_13385) | 2752270..2752893 | - | 624 | WP_004781903.1 | MotA/TolQ/ExbB proton channel family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|