MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94645 bp
Accession: NZ_CP104650 Location: 1..94645 Organism: Escherichia coli strain PNUSAE008512 Replicon: plasmid unnamed1
Accession: NZ_CP104650 Location: 1..94645 Organism: Escherichia coli strain PNUSAE008512 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5913_RS27475 (43) | 43..789 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| N5913_RS27480 (848) | 848..1708 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| N5913_RS27485 (1811) | 1811..2371 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| N5913_RS27490 (2504) | 2504..2716 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| N5913_RS27495 (2961) | 2961..3422 | + | 462 | WP_001233856.1 | thermonuclease family protein | - |
| N5913_RS27500 (3468) | 3468..3677 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| N5913_RS27505 (3715) | 3715..4053 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| N5913_RS27510 (4293) | 4293..4547 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| N5913_RS27515 (4783) | 4783..4857 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| N5913_RS27520 (4850) | 4850..5707 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| N5913_RS27525 (6620) | 6620..6904 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| N5913_RS27530 (6904) | 6904..7179 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N5913_RS27535 (7274) | 7274..7480 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| N5913_RS27540 (7580) | 7580..7795 | - | 216 | Protein_14 | transposase | - |
| N5913_RS27545 (7839) | 7839..8405 | - | 567 | Protein_15 | IS3 family transposase ISSd1 | Transposase |
| N5913_RS27550 (8405) | 8405..8821 | - | 417 | Protein_16 | IS91 family transposase | - |
| N5913_RS27555 (8821) | 8821..9006 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| N5913_RS27560 (9183) | 9183..11393 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| N5913_RS27565 (11437) | 11437..11826 | + | 390 | WP_001172748.1 | cytochrome b562 | - |
| N5913_RS27570 (11883) | 11883..12871 | + | 989 | Protein_20 | IS3 family transposase IS629 | Transposase |
| N5913_RS27575 (13052) | 13052..16954 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| N5913_RS27580 (17210) | 17210..17691 | - | 482 | Protein_22 | IS1 family transposase IS1N | Transposase |
| N5913_RS27585 (19133) | 19133..19954 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| N5913_RS27590 (19954) | 19954..21060 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| N5913_RS27595 (21150) | 21150..22871 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| N5913_RS27600 (22945) | 22945..23943 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| N5913_RS27605 (23996) | 23996..24184 | + | 189 | Protein_27 | hypothetical protein | - |
| N5913_RS27610 (24311) | 24311..24691 | + | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| N5913_RS27615 (24688) | 24688..25035 | + | 348 | WP_261577623.1 | IS66 family transposase ISEc8 | Transposase |
| N5913_RS27620 (25232) | 25232..25909 | + | 678 | Protein_30 | IS66 family transposase ISEc8 | Transposase |
| N5913_RS27625 (25908) | 25908..26407 | + | 500 | Protein_31 | IS66 family transposase ISEc8 | Transposase |
| N5913_RS27630 (26516) | 26516..26623 | + | 108 | WP_001696783.1 | IS66 family transposase ISEc8 | Transposase |
| N5913_RS27635 (26738) | 26738..26824 | - | 87 | Protein_33 | IS3 family transposase ISEhe3 | Transposase |
| N5913_RS27640 (27279) | 27279..29975 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| N5913_RS27645 (30062) | 30062..30937 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| N5913_RS27650 (30938) | 30938..32905 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| N5913_RS27655 (32905) | 32905..34410 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| N5913_RS27660 (34412) | 34412..35635 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| N5913_RS27665 (35666) | 35666..36100 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| N5913_RS27670 (36097) | 36097..36651 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| N5913_RS27675 (36666) | 36666..37013 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| N5913_RS27680 (37010) | 37010..37609 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| N5913_RS27685 (37606) | 37606..38583 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| N5913_RS27690 (38517) | 38517..39794 | + | 1278 | WP_011321724.1 | Type II secretion system protein L | VF |
| N5913_RS27695 (39781) | 39781..40293 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| N5913_RS27700 (40468) | 40468..41184 | + | 717 | WP_001358889.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| N5913_RS27705 (41276) | 41276..41677 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| N5913_RS27710 (41856) | 41856..43027 | + | 1172 | WP_085949322.1 | IS3 family transposase ISLad1 | Transposase |
| N5913_RS27715 (43568) | 43568..44083 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| N5913_RS27720 (44085) | 44085..47081 | + | 2997 | WP_000217733.1 | Hemolysin, chromosomal | VF |
| N5913_RS27725 (47131) | 47131..49251 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| N5913_RS27730 (49255) | 49255..50694 | + | 1440 | WP_001213542.1 | Hemolysin secretion protein D, chromosomal | VF |
| N5913_RS27735 (50761) | 50761..50955 | + | 195 | WP_001303402.1 | hypothetical protein | VF |
| N5913_RS27740 (50985) | 50985..51269 | + | 285 | WP_001358890.1 | Transcriptional repressor MprA | VF |
| N5913_RS27745 (51438) | 51438..51668 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| N5913_RS27750 (51789) | 51789..52529 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| N5913_RS27755 (52814) | 52814..53791 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| N5913_RS27760 (54199) | 54199..54399 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| N5913_RS27765 (54396) | 54396..55016 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| N5913_RS27770 (55013) | 55013..55696 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| N5913_RS27775 (56155) | 56155..56373 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| N5913_RS27785 (57694) | 57694..57993 | + | 300 | WP_027868286.1 | type II toxin-antitoxin system toxin CcdB | - |
| N5913_RS27790 (57994) | 57994..58800 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| N5913_RS27795 (59523) | 59523..60734 | - | 1212 | Protein_65 | IS3 family transposase | - |
| N5913_RS27800 (60810) | 60810..61565 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| N5913_RS27805 (62153) | 62153..63319 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| N5913_RS27810 (63319) | 63319..64290 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| N5913_RS27815 (64985) | 64985..65887 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| N5913_RS27820 (65891) | 65891..66196 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| N5913_RS27825 (66273) | 66273..66956 | + | 684 | WP_000085945.1 | DNA methylase | - |
| N5913_RS27830 (66957) | 66957..67178 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| N5913_RS27835 (67072) | 67072..67626 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| N5913_RS27840 (67672) | 67672..68448 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| N5913_RS27845 (68866) | 68866..69291 | + | 426 | WP_001198930.1 | antirestriction protein | - |
| N5913_RS27850 (69338) | 69338..69760 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| N5913_RS27855 (69757) | 69757..69948 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| N5913_RS27860 (69918) | 69918..70427 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| N5913_RS27865 (70944) | 70944..71174 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| N5913_RS27870 (71226) | 71226..72587 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| N5913_RS27875 (72634) | 72634..73197 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| N5913_RS27880 (73283) | 73283..73732 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| N5913_RS27885 (73802) | 73802..74008 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| N5913_RS27890 (74034) | 74034..74486 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| N5913_RS27895 (74543) | 74543..74776 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| N5913_RS27900 (74842) | 74842..76800 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| N5913_RS27905 (76855) | 76855..77289 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| N5913_RS27910 (77286) | 77286..78047 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - (78016) | 78016..78214 | + | 199 | NuclAT_0 | - | - |
| - (78016) | 78016..78214 | + | 199 | NuclAT_0 | - | - |
| - (78016) | 78016..78214 | + | 199 | NuclAT_0 | - | - |
| - (78016) | 78016..78214 | + | 199 | NuclAT_0 | - | - |
| - (78016) | 78016..78214 | - | 199 | NuclAT_0 | - | - |
| N5913_RS27915 (78221) | 78221..78370 | + | 150 | Protein_89 | FlmC family protein | - |
| N5913_RS27920 (78312) | 78312..78437 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| N5913_RS27925 (78571) | 78571..80592 | + | 2022 | Protein_91 | hypothetical protein | Relaxase |
| N5913_RS27930 (80660) | 80660..81091 | + | 432 | WP_001453090.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| N5913_RS27935 (81798) | 81798..82147 | - | 350 | Protein_93 | IS3 family transposase IS3H | Transposase |
| N5913_RS27940 (82241) | 82241..82504 | + | 264 | Protein_94 | IS21 family transposase ISEc62 | Transposase |
| N5913_RS27945 (82544) | 82544..82664 | + | 121 | Protein_95 | IS21 family transposase ISEc62 | Transposase |
| N5913_RS27950 (82661) | 82661..82813 | + | 153 | Protein_96 | IS1 family transposase | - |
| N5913_RS27955 (82920) | 82920..92429 | + | 9510 | WP_261589778.1 | Toxin B | VF |
| N5913_RS27960 (92503) | 92503..92727 | + | 225 | Protein_98 | IS3 family transposase IS3H | Transposase |
| N5913_RS27965 (92720) | 92720..92965 | - | 246 | Protein_99 | IS3 family transposase IS1203 | Transposase |
| N5913_RS27970 (92972) | 92972..93223 | - | 252 | Protein_100 | IS3 family transposase IS1203 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|