MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94647 bp
Accession: NZ_CP104648 Location: 1..94647 Organism: Escherichia coli strain PNUSAE008406 Replicon: plasmid unnamed1
Accession: NZ_CP104648 Location: 1..94647 Organism: Escherichia coli strain PNUSAE008406 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5921_RS27515 (775) | 775..1530 | - | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| N5921_RS27520 (1606) | 1606..2817 | + | 1212 | Protein_2 | IS3 family transposase | - |
| N5921_RS27525 (3540) | 3540..4346 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| N5921_RS27530 (4347) | 4347..4646 | - | 300 | WP_027868286.1 | type II toxin-antitoxin system toxin CcdB | - |
| N5921_RS27535 (4700) | 4700..5912 | + | 1213 | Protein_5 | IS3 family transposase | - |
| N5921_RS27540 (5966) | 5966..6184 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| N5921_RS27545 (6643) | 6643..7326 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| N5921_RS27550 (7323) | 7323..7943 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| N5921_RS27555 (7940) | 7940..8140 | + | 201 | WP_000708307.1 | hypothetical protein | - |
| N5921_RS27560 (8548) | 8548..9525 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| N5921_RS27565 (9810) | 9810..10550 | - | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| N5921_RS27570 (10671) | 10671..10901 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| N5921_RS27575 (11070) | 11070..11354 | - | 285 | WP_001358890.1 | Transcriptional repressor MprA | VF |
| N5921_RS27580 (11384) | 11384..11578 | - | 195 | WP_001303402.1 | hypothetical protein | VF |
| N5921_RS27585 (11645) | 11645..13084 | - | 1440 | WP_001213542.1 | Hemolysin secretion protein D, chromosomal | VF |
| N5921_RS27590 (13088) | 13088..15208 | - | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| N5921_RS27595 (15258) | 15258..18254 | - | 2997 | WP_000217733.1 | Hemolysin, chromosomal | VF |
| N5921_RS27600 (18256) | 18256..18771 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| N5921_RS27610 (20662) | 20662..21063 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| N5921_RS27615 (21155) | 21155..21871 | - | 717 | WP_001358889.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| N5921_RS27620 (22046) | 22046..22558 | - | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| N5921_RS27625 (22545) | 22545..23822 | - | 1278 | WP_011321724.1 | Type II secretion system protein L | VF |
| N5921_RS27630 (23756) | 23756..24733 | - | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| N5921_RS27635 (24730) | 24730..25329 | - | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| N5921_RS27640 (25326) | 25326..25673 | - | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| N5921_RS27645 (25688) | 25688..26242 | - | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| N5921_RS27650 (26239) | 26239..26673 | - | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| N5921_RS27655 (26704) | 26704..27927 | - | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| N5921_RS27660 (27929) | 27929..29434 | - | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| N5921_RS27665 (29434) | 29434..31401 | - | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| N5921_RS27670 (31402) | 31402..32277 | - | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| N5921_RS27675 (32364) | 32364..35060 | - | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| N5921_RS27680 (35520) | 35520..35606 | + | 87 | Protein_34 | IS3 family transposase ISEhe3 | Transposase |
| N5921_RS27685 (35721) | 35721..37259 | - | 1539 | WP_000998042.1 | IS66 family transposase ISEc8 | Transposase |
| N5921_RS27690 (37309) | 37309..37656 | - | 348 | WP_250171122.1 | IS66 family transposase ISEc8 | Transposase |
| N5921_RS27695 (37653) | 37653..38033 | - | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| N5921_RS27700 (38160) | 38160..38348 | - | 189 | Protein_38 | hypothetical protein | - |
| N5921_RS27705 (38401) | 38401..39399 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| N5921_RS27710 (39473) | 39473..41194 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| N5921_RS27715 (41284) | 41284..42390 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| N5921_RS27720 (42390) | 42390..43211 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| N5921_RS27725 (44653) | 44653..45134 | + | 482 | Protein_43 | IS1 family transposase IS1N | Transposase |
| N5921_RS27730 (45390) | 45390..49292 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| N5921_RS27735 (49473) | 49473..50460 | - | 988 | Protein_45 | IS3 family transposase IS629 | Transposase |
| N5921_RS27740 (50517) | 50517..50906 | - | 390 | WP_001172748.1 | cytochrome b562 | - |
| N5921_RS27745 (50950) | 50950..53160 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| N5921_RS27750 (53337) | 53337..53522 | + | 186 | WP_001302179.1 | hypothetical protein | - |
| N5921_RS27755 (53522) | 53522..53938 | + | 417 | Protein_49 | IS91 family transposase | - |
| N5921_RS27760 (53938) | 53938..54504 | + | 567 | Protein_50 | IS3 family transposase ISSd1 | Transposase |
| N5921_RS27765 (54548) | 54548..54763 | + | 216 | Protein_51 | transposase | - |
| N5921_RS27770 (54863) | 54863..55069 | - | 207 | WP_001105064.1 | hypothetical protein | - |
| N5921_RS27775 (55164) | 55164..55439 | - | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N5921_RS27780 (55439) | 55439..55723 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| N5921_RS27785 (56635) | 56635..57492 | - | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| N5921_RS27790 (57485) | 57485..57559 | - | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| N5921_RS27795 (57795) | 57795..58049 | - | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| N5921_RS27800 (58289) | 58289..58627 | - | 339 | WP_000766796.1 | hypothetical protein | - |
| N5921_RS27805 (58665) | 58665..58874 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| N5921_RS27810 (58920) | 58920..59381 | - | 462 | WP_001233856.1 | thermonuclease family protein | - |
| N5921_RS27815 (59626) | 59626..59838 | - | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| N5921_RS27820 (59971) | 59971..60531 | - | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| N5921_RS27825 (60634) | 60634..61494 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| N5921_RS27830 (61553) | 61553..62299 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| N5921_RS27835 (62319) | 62319..63707 | - | 1389 | Protein_65 | Multifunctional conjugation protein TraI | Relaxase |
| N5921_RS27840 (63764) | 63764..64015 | + | 252 | Protein_66 | IS3 family transposase IS1203 | Transposase |
| N5921_RS27845 (64022) | 64022..64267 | + | 246 | Protein_67 | IS3 family transposase IS1203 | Transposase |
| N5921_RS27850 (64260) | 64260..64484 | - | 225 | Protein_68 | IS3 family transposase IS3H | Transposase |
| N5921_RS27855 (64558) | 64558..74067 | - | 9510 | WP_261589778.1 | Toxin B | VF |
| N5921_RS27860 (74174) | 74174..74326 | - | 153 | Protein_70 | IS1 family transposase | - |
| N5921_RS27865 (74323) | 74323..74443 | - | 121 | Protein_71 | IS21 family transposase ISEc62 | Transposase |
| N5921_RS27870 (74483) | 74483..74746 | - | 264 | Protein_72 | IS21 family transposase ISEc62 | Transposase |
| N5921_RS27875 (74840) | 74840..75189 | + | 350 | Protein_73 | IS3 family transposase IS3H | Transposase |
| N5921_RS27880 (75896) | 75896..76327 | - | 432 | WP_001453090.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| N5921_RS27885 (76395) | 76395..78416 | - | 2022 | Protein_75 | hypothetical protein | Relaxase |
| N5921_RS27890 (78550) | 78550..78675 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| N5921_RS27895 (78617) | 78617..78766 | - | 150 | Protein_77 | FlmC family protein | - |
| - (78773) | 78773..78971 | + | 199 | NuclAT_0 | - | - |
| - (78773) | 78773..78971 | - | 199 | NuclAT_0 | - | - |
| - (78773) | 78773..78971 | - | 199 | NuclAT_0 | - | - |
| - (78773) | 78773..78971 | - | 199 | NuclAT_0 | - | - |
| - (78773) | 78773..78971 | - | 199 | NuclAT_0 | - | - |
| N5921_RS27900 (78940) | 78940..79701 | - | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| N5921_RS27905 (79698) | 79698..80132 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| N5921_RS27910 (80187) | 80187..82145 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| N5921_RS27915 (82211) | 82211..82444 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| N5921_RS27920 (82501) | 82501..82953 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| N5921_RS27925 (82979) | 82979..83185 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| N5921_RS27930 (83255) | 83255..83704 | + | 450 | WP_001451816.1 | hypothetical protein | - |
| N5921_RS27935 (83790) | 83790..84353 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| N5921_RS27940 (84400) | 84400..85761 | - | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| N5921_RS27945 (85813) | 85813..86043 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| N5921_RS27950 (86560) | 86560..87069 | + | 510 | WP_032245379.1 | hypothetical protein | - |
| N5921_RS27955 (87039) | 87039..87230 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| N5921_RS27960 (87227) | 87227..87649 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| N5921_RS27965 (87696) | 87696..88121 | - | 426 | WP_001198930.1 | antirestriction protein | - |
| N5921_RS27970 (88539) | 88539..89315 | - | 777 | WP_001005037.1 | hypothetical protein | - |
| N5921_RS27975 (89361) | 89361..89915 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| N5921_RS27980 (89809) | 89809..90030 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| N5921_RS27985 (90031) | 90031..90714 | - | 684 | WP_000085945.1 | DNA methylase | - |
| N5921_RS27990 (90791) | 90791..91096 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| N5921_RS27995 (91100) | 91100..92002 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| N5921_RS28000 (92697) | 92697..93668 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|