MGE detailed information
MGE type: Prophage MGE length: 39029 bp
Accession: NZ_CP104647 Location: 64..39092 Organism: Escherichia coli strain PNUSAE008406 Replicon: chromosome
Accession: NZ_CP104647 Location: 64..39092 Organism: Escherichia coli strain PNUSAE008406 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5921_RS00010 () | 2492..3072 | - | 581 | Protein_1 | tail assembly protein | - |
| N5921_RS00015 () | 3069..3811 | - | 743 | Protein_2 | C40 family peptidase | - |
| N5921_RS00020 () | 3823..4521 | - | 699 | WP_001151105.1 | phage minor tail protein L | - |
| N5921_RS00025 () | 4521..4850 | - | 330 | WP_000847298.1 | phage tail protein | - |
| N5921_RS00030 () | 4847..6020 | - | 1174 | Protein_5 | phage tail tape measure protein | - |
| N5921_RS00035 () | 5974..7008 | - | 1035 | WP_261589772.1 | phage tail length tape measure family protein | - |
| N5921_RS00040 () | 7147..7495 | - | 349 | Protein_7 | phage tail length tape measure family protein | - |
| N5921_RS00045 () | 7545..7847 | - | 303 | Protein_8 | phage tail assembly protein T | - |
| N5921_RS00050 () | 7874..8296 | - | 423 | WP_000479062.1 | phage minor tail protein G | - |
| N5921_RS00055 () | 8310..9063 | - | 754 | Protein_10 | Ig domain-containing protein | - |
| N5921_RS00060 () | 9071..9471 | - | 401 | Protein_11 | phage minor tail U family protein | - |
| N5921_RS00065 () | 9484..10107 | - | 624 | WP_001450644.1 | phage tail protein | - |
| N5921_RS00070 () | 10110..10391 | - | 282 | WP_001281347.1 | DNA breaking-rejoining protein | - |
| N5921_RS00075 () | 10384..10710 | - | 327 | WP_001097065.1 | DUF2190 family protein | - |
| N5921_RS00080 () | 10798..12820 | - | 2023 | Protein_15 | ATP-dependent Clp protease proteolytic subunit | VF |
| N5921_RS00085 () | 12765..14267 | - | 1503 | WP_000974576.1 | phage portal protein | - |
| N5921_RS00090 () | 14267..14479 | - | 213 | WP_000102415.1 | hypothetical protein | - |
| N5921_RS00095 () | 14476..16603 | - | 2128 | Protein_18 | phage terminase large subunit family protein | - |
| N5921_RS00100 () | 16600..17076 | - | 477 | WP_000348565.1 | DUF1441 family protein | - |
| N5921_RS00105 () | 17593..17778 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| N5921_RS00110 () | 18297..18830 | - | 534 | WP_001092902.1 | lysozyme | - |
| N5921_RS00115 () | 18867..19424 | - | 558 | WP_001015158.1 | hypothetical protein | - |
| N5921_RS00120 () | 19428..19643 | - | 216 | WP_001072901.1 | class II holin family protein | - |
| N5921_RS00125 () | 19721..19966 | - | 246 | WP_261589727.1 | DUF826 domain-containing protein | - |
| N5921_RS00130 () | 20007..20148 | - | 142 | Protein_25 | DUF1378 family protein | - |
| N5921_RS00135 () | 20099..20212 | - | 114 | WP_001303208.1 | hypothetical protein | - |
| N5921_RS00140 () | 20328..22273 | - | 1946 | Protein_27 | DUF1737 domain-containing protein | - |
| N5921_RS00145 () | 22514..22648 | + | 135 | Protein_28 | hypothetical protein | - |
| N5921_RS00155 () | 22868..23926 | - | 1059 | WP_261589730.1 | site-specific DNA-methyltransferase | - |
| N5921_RS00160 () | 24077..24274 | - | 198 | WP_000917735.1 | hypothetical protein | - |
| N5921_RS00165 () | 24501..25322 | - | 822 | WP_000762902.1 | antitermination protein | - |
| N5921_RS00170 () | 25319..25693 | - | 375 | WP_000904171.1 | RusA family crossover junction endodeoxyribonuclease | - |
| N5921_RS00175 () | 25706..26754 | - | 1049 | Protein_33 | DUF968 domain-containing protein | - |
| N5921_RS00180 () | 26756..27034 | - | 279 | WP_072166534.1 | hypothetical protein | - |
| N5921_RS00185 () | 27104..27361 | - | 258 | WP_001217394.1 | hypothetical protein | - |
| N5921_RS00190 () | 27583..27738 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 27750..27808 | + | 59 | - | - | Antitoxin Detail |
| N5921_RS00195 () | 27984..28088 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| N5921_RS00200 () | 28204..28566 | - | 363 | WP_000610377.1 | DUF551 domain-containing protein | - |
| N5921_RS00205 () | 28563..28934 | - | 372 | WP_000137941.1 | hypothetical protein | - |
| N5921_RS00210 () | 28970..29182 | - | 213 | WP_000063625.1 | hypothetical protein | - |
| N5921_RS00215 () | 29231..29587 | - | 357 | WP_001302146.1 | hypothetical protein | - |
| N5921_RS00220 () | 29644..30039 | - | 396 | WP_001118161.1 | DUF977 family protein | - |
| N5921_RS00225 () | 30055..30825 | - | 771 | WP_000537576.1 | DUF1627 domain-containing protein | - |
| N5921_RS00230 () | 30860..31321 | - | 462 | WP_000139484.1 | replication protein P | - |
| N5921_RS00235 () | 31314..32354 | - | 1041 | WP_261589732.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| N5921_RS00240 () | 32326..32877 | - | 552 | WP_000705378.1 | toxin YdaT family protein | - |
| N5921_RS00245 () | 32861..33088 | - | 228 | WP_000476986.1 | Cro/CI family transcriptional regulator | - |
| N5921_RS00250 () | 33166..33573 | + | 408 | WP_001003379.1 | helix-turn-helix domain-containing protein | - |
| N5921_RS00255 () | 33763..33918 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| N5921_RS00260 () | 33920..34048 | + | 129 | WP_000344930.1 | protein YdfB | - |
| N5921_RS00265 () | 34078..34296 | + | 219 | WP_001171938.1 | protein YdfC | - |
| N5921_RS00270 () | 34300..34464 | - | 165 | WP_001302137.1 | hypothetical protein | - |
| N5921_RS00275 () | 34865..35053 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| N5921_RS00280 () | 35050..35241 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| N5921_RS00285 () | 35334..37805 | + | 2472 | WP_001358072.1 | exonuclease | - |
| N5921_RS00290 () | 37864..38067 | + | 204 | WP_000067202.1 | DUF4224 domain-containing protein | - |
| N5921_RS00295 () | 38067..39117 | + | 1051 | Protein_57 | Tyrosine recombinase XerC ; Integrase | Integrase |
| N5921_RS00305 () | 39328..40125 | + | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|