MGE detailed information
MGE type: Genomic_island MGE length: 42090 bp
Accession: NZ_CP104645 Location: 4299732..4341821 Organism: Escherichia coli strain PNUSAE019785 Replicon: chromosome
Accession: NZ_CP104645 Location: 4299732..4341821 Organism: Escherichia coli strain PNUSAE019785 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
N5932_RS20965 (4298236) | 4298236..4298454 | + | 219 | WP_000477623.1 | hypothetical protein | - |
N5932_RS20970 (4299087) | 4299087..4299422 | + | 336 | WP_001310149.1 | hypothetical protein | - |
N5932_RS20975 (4299732) | 4299732..4299860 | - | 129 | WP_001304210.1 | IS3 family transposase ISKpn1 | Transposase |
N5932_RS20980 (4300203) | 4300203..4300397 | - | 195 | WP_001004881.1 | hypothetical protein | - |
N5932_RS20985 (4300725) | 4300725..4300913 | - | 189 | WP_000180465.1 | hypothetical protein | - |
N5932_RS20990 (4301218) | 4301218..4301488 | + | 271 | Protein_4080 | hypothetical protein | - |
N5932_RS20995 (4301554) | 4301554..4301751 | + | 198 | WP_000958487.1 | AlpA family transcriptional regulator | - |
N5932_RS21000 (4302481) | 4302481..4303605 | + | 1125 | WP_001231525.1 | Elloramycin glycosyltransferase ElmGT | VF |
N5932_RS21005 (4303747) | 4303747..4304007 | - | 261 | Protein_4083 | alpha/beta hydrolase-fold protein | - |
N5932_RS21015 (4304959) | 4304959..4305417 | - | 459 | WP_001301456.1 | hypothetical protein | - |
N5932_RS21020 (4305875) | 4305875..4306384 | + | 510 | WP_001167434.1 | hypothetical protein | - |
N5932_RS21025 (4306473) | 4306473..4307096 | + | 624 | WP_001260384.1 | hypothetical protein | - |
N5932_RS21030 (4307192) | 4307192..4307425 | + | 234 | WP_000124179.1 | hypothetical protein | - |
N5932_RS21035 (4307478) | 4307478..4307669 | - | 192 | WP_001287881.1 | DUF4222 domain-containing protein | - |
N5932_RS21040 (4308263) | 4308263..4309477 | - | 1215 | WP_144241375.1 | IS3 family transposase IS1203 | Transposase |
N5932_RS21045 (4309658) | 4309658..4310704 | + | 1047 | WP_001345400.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
N5932_RS21050 (4310945) | 4310945..4311460 | + | 516 | WP_001304206.1 | hypothetical protein | - |
N5932_RS21055 (4311490) | 4311490..4313625 | + | 2136 | WP_001464388.1 | AAA domain-containing protein | - |
N5932_RS21060 (4314126) | 4314126..4315358 | + | 1233 | WP_001285506.1 | phosphoadenosine phosphosulfate reductase | - |
N5932_RS21065 (4315343) | 4315343..4315981 | + | 639 | WP_000502842.1 | ParB N-terminal domain-containing protein | - |
N5932_RS21070 (4316060) | 4316060..4316329 | + | 270 | WP_000226520.1 | PerC family transcriptional regulator | - |
N5932_RS21075 (4316350) | 4316350..4316994 | + | 645 | WP_001333354.1 | hypothetical protein | - |
N5932_RS21080 (4317310) | 4317310..4317649 | + | 340 | Protein_4098 | IS481 family transposase ISEc18 | Transposase |
N5932_RS21085 (4317692) | 4317692..4317907 | - | 216 | Protein_4099 | IS481 family transposase ISEc18 | Transposase |
N5932_RS21090 (4317994) | 4317994..4318419 | + | 426 | WP_000422760.1 | IS66 family transposase ISEc23 | Transposase |
N5932_RS21095 (4318416) | 4318416..4318490 | + | 75 | Protein_4101 | IS66 family transposase IS682 | Transposase |
N5932_RS21100 (4318719) | 4318719..4318901 | - | 183 | WP_000282125.1 | hypothetical protein | - |
N5932_RS21105 (4319231) | 4319231..4320103 | + | 873 | WP_001069769.1 | GTPase family protein | - |
N5932_RS21110 (4320475) | 4320475..4323324 | + | 2850 | WP_000820483.1 | calcium-binding autotransporter Cah | - |
N5932_RS21115 (4323435) | 4323435..4325820 | + | 2386 | Protein_4105 | dynamin family protein | - |
N5932_RS21120 (4325817) | 4325817..4326722 | + | 906 | WP_000203541.1 | diguanylate cyclase regulator RdcB family protein | - |
N5932_RS21125 (4326719) | 4326719..4327789 | + | 1071 | WP_000102669.1 | patatin-like phospholipase family protein | - |
N5932_RS21130 (4328129) | 4328129..4328947 | + | 819 | WP_001234682.1 | DUF932 domain-containing protein | - |
N5932_RS21135 (4329038) | 4329038..4329523 | + | 486 | WP_000214398.1 | antirestriction protein | - |
N5932_RS21140 (4329539) | 4329539..4330015 | + | 477 | WP_001186738.1 | RadC family protein | - |
N5932_RS21145 (4330078) | 4330078..4330299 | + | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
N5932_RS21150 (4330462) | 4330462..4330836 | + | 375 | WP_001280954.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
N5932_RS21155 (4330883) | 4330883..4331257 | + | 375 | WP_000854914.1 | TA system toxin CbtA family protein | Toxin Detail |
N5932_RS21160 (4331254) | 4331254..4331745 | + | 492 | WP_000976853.1 | DUF5983 family protein | - |
N5932_RS21165 (4331757) | 4331757..4331954 | + | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
N5932_RS21170 (4332039) | 4332039..4332881 | + | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
N5932_RS21180 (4333352) | 4333352..4334290 | + | 939 | WP_000351284.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
N5932_RS21185 (4334345) | 4334345..4335082 | + | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
N5932_RS21190 (4335106) | 4335106..4335660 | + | 555 | WP_001001917.1 | molecular chaperone YcdY | - |
N5932_RS21195 (4335762) | 4335762..4336253 | + | 492 | WP_001301587.1 | DUF1097 domain-containing protein | - |
N5932_RS21200 (4336317) | 4336317..4337150 | - | 834 | WP_001189328.1 | Curli production assembly/transport component CsgG | VF |
N5932_RS21205 (4337177) | 4337177..4337593 | - | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
N5932_RS21210 (4337618) | 4337618..4338007 | - | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
N5932_RS21215 (4338012) | 4338012..4338662 | - | 651 | WP_000481500.1 | CsgBAC operon transcriptional regulatory protein | VF |
N5932_RS21220 (4339416) | 4339416..4339871 | + | 456 | WP_000791650.1 | Minor curlin subunit | VF |
N5932_RS21225 (4339912) | 4339912..4340370 | + | 459 | WP_000771428.1 | Major curlin subunit | VF |
N5932_RS21230 (4340429) | 4340429..4340761 | + | 333 | WP_000992818.1 | Curli assembly protein CsgC | VF |
N5932_RS21235 (4340882) | 4340882..4341193 | + | 312 | WP_000489578.1 | protein YmdA | - |
N5932_RS21240 (4341288) | 4341288..4341821 | + | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
N5932_RS21245 (4341763) | 4341763..4343244 | + | 1482 | WP_010917790.1 | cardiolipin synthase ClsC | - |
N5932_RS21250 (4343252) | 4343252..4344409 | - | 1158 | WP_001070358.1 | glucans biosynthesis protein MdoC | - |
N5932_RS21255 (4344802) | 4344802..4346337 | + | 1536 | WP_001300662.1 | glucans biosynthesis protein MdoG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|