MGE detailed information
MGE type: Genomic_island MGE length: 19651 bp
Accession: NZ_CP104643 Location: 4403818..4423468 Organism: Salmonella enterica strain 1020677 Replicon: chromosome
Accession: NZ_CP104643 Location: 4403818..4423468 Organism: Salmonella enterica strain 1020677 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5930_RS21500 (4399084) | 4399084..4399614 | - | 531 | WP_000907671.1 | Hcp family type VI secretion system effector | - |
| N5930_RS21505 (4400332) | 4400332..4401345 | + | 1014 | WP_001094620.1 | tryptophan--tRNA ligase | - |
| N5930_RS21510 (4401346) | 4401346..4402119 | - | 774 | WP_000841654.1 | Uxu operon transcriptional regulator | - |
| N5930_RS21515 (4402469) | 4402469..4403134 | + | 666 | WP_001576579.1 | dienelactone hydrolase family protein | - |
| N5930_RS21520 (4403151) | 4403151..4403613 | - | 463 | Protein_4186 | DUF302 domain-containing protein | - |
| N5930_RS21525 (4403818) | 4403818..4404729 | - | 912 | WP_000556773.1 | hypothetical protein | - |
| N5930_RS21530 (4405081) | 4405081..4405689 | - | 609 | WP_000864865.1 | DUF1062 domain-containing protein | - |
| N5930_RS21535 (4406177) | 4406177..4406434 | + | 258 | WP_001054380.1 | YjhX family toxin | - |
| N5930_RS21540 (4406439) | 4406439..4408070 | + | 1632 | WP_000979782.1 | class I SAM-dependent methyltransferase | - |
| N5930_RS21545 (4408630) | 4408630..4409346 | + | 717 | WP_000532939.1 | transcriptional regulatory protein YeeN | VF |
| N5930_RS21550 (4409826) | 4409826..4410701 | - | 876 | Protein_4192 | HNH endonuclease | - |
| N5930_RS21555 (4410957) | 4410957..4412067 | - | 1111 | Protein_4193 | IS3 family transposase | - |
| N5930_RS21560 (4412330) | 4412330..4413175 | - | 846 | WP_053299227.1 | YjiK family protein | - |
| N5930_RS21565 (4413226) | 4413226..4413372 | - | 147 | WP_001141718.1 | hypothetical protein | - |
| N5930_RS21570 (4413362) | 4413362..4414018 | - | 657 | WP_077907617.1 | DsbA family protein | - |
| N5930_RS21575 (4414262) | 4414262..4414612 | - | 351 | WP_000135399.1 | Transcriptional regulatory protein RcsB | VF |
| N5930_RS21580 (4414597) | 4414597..4414806 | - | 210 | WP_000504712.1 | hypothetical protein | VF |
| N5930_RS21585 (4415383) | 4415383..4416198 | + | 816 | WP_000914537.1 | AraC family transcriptional regulator | - |
| N5930_RS21590 (4416232) | 4416232..4416429 | - | 198 | WP_231849110.1 | AfaD family invasin | - |
| N5930_RS21595 (4416462) | 4416462..4416677 | - | 216 | WP_001077814.1 | hypothetical protein | - |
| N5930_RS21600 (4416674) | 4416674..4419118 | - | 2445 | WP_000753927.1 | hypothetical protein | VF |
| N5930_RS21605 (4419135) | 4419135..4419875 | - | 741 | WP_001676217.1 | hypothetical protein | VF |
| N5930_RS21610 (4419997) | 4419997..4420527 | - | 531 | WP_001708209.1 | hypothetical protein | VF |
| N5930_RS21615 (4420850) | 4420850..4421983 | + | 1134 | Protein_4205 | IS3 family transposase | - |
| N5930_RS21620 (4422015) | 4422015..4422155 | - | 141 | Protein_4206 | Arm DNA-binding domain-containing protein | - |
| N5930_RS21625 (4422561) | 4422561..4422869 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| N5930_RS21630 (4422872) | 4422872..4423111 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| N5930_RS21635 (4423220) | 4423220..4423468 | - | 249 | WP_000168388.1 | ribbon-helix-helix domain-containing protein | - |
| N5930_RS21640 (4423545) | 4423545..4424090 | - | 546 | WP_223151225.1 | helix-turn-helix domain-containing protein | - |
| N5930_RS21650 (4424847) | 4424847..4425866 | + | 1020 | WP_000152558.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| N5930_RS21655 (4425894) | 4425894..4426424 | - | 531 | WP_000896758.1 | gluconokinase | - |
| N5930_RS21660 (4426641) | 4426641..4427672 | + | 1032 | WP_000453347.1 | L-idonate 5-dehydrogenase | - |
| N5930_RS21665 (4427697) | 4427697..4428461 | + | 765 | WP_000998685.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|