MGE detailed information
MGE type: Prophage MGE length: 61384 bp
Accession: NZ_CP104643 Location: 2985119..3046502 Organism: Salmonella enterica strain 1020677 Replicon: chromosome
Accession: NZ_CP104643 Location: 2985119..3046502 Organism: Salmonella enterica strain 1020677 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5930_RS14515 () | 2980848..2981306 | + | 459 | WP_000156284.1 | DUF986 family protein | - |
| N5930_RS14520 () | 2981716..2982282 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| N5930_RS14525 () | 2982279..2983088 | - | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| N5930_RS14530 () | 2983154..2984899 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| N5930_RS14535 () | 2985119..2985328 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| N5930_RS14540 () | 2985341..2985484 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| N5930_RS14545 () | 2986133..2986420 | - | 288 | WP_001000660.1 | YebO family protein | - |
| N5930_RS14550 () | 2986491..2986634 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| N5930_RS14555 () | 2986792..2987031 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| N5930_RS14560 () | 2987243..2988034 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| N5930_RS14565 () | 2988210..2989583 | + | 1374 | WP_001708195.1 | MFS transporter | - |
| N5930_RS14570 () | 2989631..2990512 | - | 882 | WP_000984498.1 | protease HtpX | - |
| N5930_RS14575 () | 2990706..2992754 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| N5930_RS14580 () | 2992774..2993460 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| N5930_RS14585 () | 2993558..2994055 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| N5930_RS14590 () | 2994184..2995467 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| N5930_RS14595 () | 2995436..2998069 | + | 2634 | WP_001529852.1 | hypothetical protein | VF |
| N5930_RS14600 () | 2998147..2999586 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| N5930_RS14605 () | 2999704..2999940 | + | 237 | WP_024131108.1 | YebV family protein | - |
| N5930_RS14610 () | 3000051..3000242 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| N5930_RS14615 () | 3000261..3000911 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| N5930_RS14620 () | 3001135..3001299 | - | 165 | WP_001134856.1 | membrane protein | - |
| N5930_RS14625 () | 3001584..3002306 | - | 723 | WP_000182071.1 | hypothetical protein | VF |
| N5930_RS14630 () | 3002990..3003385 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| N5930_RS14635 () | 3003715..3004191 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| N5930_RS14640 () | 3004564..3004983 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| N5930_RS14645 () | 3005356..3005625 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| N5930_RS14650 () | 3005791..3005931 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| N5930_RS14655 () | 3006077..3007284 | - | 1208 | Protein_2847 | IS256 family transposase ISEc39 | Transposase |
| N5930_RS14660 () | 3007354..3007820 | + | 467 | Protein_2848 | tyrosine-type recombinase/integrase | - |
| N5930_RS14665 () | 3009070..3009984 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| N5930_RS14670 () | 3010117..3010275 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| N5930_RS14675 () | 3010285..3010899 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| N5930_RS14680 () | 3011226..3011458 | - | 233 | Protein_2852 | helix-turn-helix domain-containing protein | - |
| N5930_RS14685 () | 3012067..3012168 | - | 102 | Protein_2853 | arsenic transporter | - |
| N5930_RS14690 () | 3012159..3012339 | + | 181 | Protein_2854 | IS3 family transposase | - |
| N5930_RS14695 () | 3012729..3012929 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| N5930_RS14700 () | 3013026..3013537 | - | 512 | Protein_2856 | tail fiber assembly protein | - |
| N5930_RS14705 () | 3013550..3013837 | - | 288 | Protein_2857 | macro domain-containing protein | - |
| N5930_RS14710 () | 3013847..3015078 | - | 1232 | Protein_2858 | tail fiber protein | - |
| N5930_RS14715 () | 3015077..3015644 | - | 568 | Protein_2859 | phage terminase large subunit family protein | - |
| N5930_RS14720 () | 3015631..3016122 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| N5930_RS14725 () | 3016177..3016365 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| N5930_RS14730 () | 3016430..3016597 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| N5930_RS14735 () | 3016854..3017387 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| N5930_RS14740 () | 3017441..3017632 | - | 192 | Protein_2864 | glycoside hydrolase family 19 protein | - |
| N5930_RS14745 () | 3017621..3018082 | + | 462 | Protein_2865 | DNA breaking-rejoining protein | - |
| N5930_RS14750 () | 3018346..3019268 | + | 923 | Protein_2866 | hypothetical protein ; Integrase | Integrase |
| N5930_RS14755 () | 3020213..3021013 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| N5930_RS14760 () | 3021042..3021283 | - | 242 | Protein_2868 | recombinase family protein | - |
| N5930_RS14765 () | 3021493..3022215 | + | 723 | WP_000161704.1 | hypothetical protein | VF |
| N5930_RS14770 () | 3022417..3022761 | - | 345 | Protein_2870 | tail fiber assembly protein | - |
| N5930_RS14775 () | 3022766..3023629 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| N5930_RS14780 () | 3023669..3026000 | - | 2332 | Protein_2872 | host specificity protein J | - |
| N5930_RS14785 () | 3026000..3026260 | - | 261 | Protein_2873 | C40 family peptidase | - |
| N5930_RS14790 () | 3026270..3026965 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| N5930_RS14795 () | 3027055..3027588 | + | 534 | WP_000877926.1 | hypothetical protein | VF |
| N5930_RS14800 () | 3027705..3027932 | - | 228 | Protein_2876 | outer membrane beta-barrel protein | - |
| N5930_RS14805 () | 3027964..3028275 | - | 312 | Protein_2877 | DUF1441 family protein | - |
| N5930_RS14810 () | 3028483..3028962 | - | 480 | WP_001541990.1 | lysis protein | - |
| N5930_RS14815 () | 3028980..3029432 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| N5930_RS14820 () | 3029416..3029745 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| N5930_RS14825 () | 3030021..3030707 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| N5930_RS14830 () | 3031068..3031517 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| N5930_RS14835 () | 3031891..3032418 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| N5930_RS14840 () | 3032512..3033201 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| N5930_RS14845 () | 3033198..3033334 | - | 137 | Protein_2885 | YlcG family protein | - |
| N5930_RS14850 () | 3033331..3033552 | - | 222 | WP_254888507.1 | recombination protein NinG | - |
| N5930_RS14855 () | 3033555..3034154 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| N5930_RS14860 () | 3034218..3034436 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| N5930_RS14865 () | 3034738..3034836 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| N5930_RS14870 () | 3035155..3037134 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| N5930_RS14875 () | 3037548..3037826 | + | 279 | WP_001575998.1 | excisionase | - |
| N5930_RS14880 () | 3037801..3038880 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 3039018..3039163 | + | 146 | - | - | Antitoxin Detail |
| - | 3039020..3039123 | - | 104 | - | - | Toxin Detail |
| N5930_RS14885 () | 3039263..3039616 | - | 354 | WP_000722370.1 | YebY family protein | - |
| N5930_RS14890 () | 3039633..3040508 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| N5930_RS14895 () | 3040509..3040883 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| N5930_RS14900 () | 3041021..3041251 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| N5930_RS14905 () | 3041359..3042015 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| N5930_RS14910 () | 3042039..3042737 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| N5930_RS14915 () | 3042774..3044825 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| N5930_RS14920 () | 3045038..3045697 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| N5930_RS14925 () | 3045791..3046144 | - | 354 | WP_001042123.1 | protein YebF | - |
| N5930_RS14930 () | 3046212..3046502 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| N5930_RS14935 () | 3046633..3047811 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| N5930_RS14940 () | 3047911..3048552 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| N5930_RS14945 () | 3048590..3050401 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|