MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP104643 Location: 1186353..1197708 Organism: Salmonella enterica strain 1020677 Replicon: chromosome
Accession: NZ_CP104643 Location: 1186353..1197708 Organism: Salmonella enterica strain 1020677 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5930_RS05675 (1181799) | 1181799..1182897 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| N5930_RS05680 (1182907) | 1182907..1184424 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| N5930_RS05685 (1184500) | 1184500..1185045 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| N5930_RS05690 (1185310) | 1185310..1186068 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| N5930_RS05700 (1186353) | 1186353..1187159 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| N5930_RS05705 (1187439) | 1187439..1187690 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| N5930_RS05710 (1187899) | 1187899..1188126 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| N5930_RS05715 (1188126) | 1188126..1188524 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| N5930_RS05720 (1189332) | 1189332..1189868 | + | 537 | WP_001038502.1 | hypothetical protein | VF |
| N5930_RS05725 (1189915) | 1189915..1190547 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| N5930_RS05730 (1191266) | 1191266..1191847 | + | 582 | WP_001244651.1 | hypothetical protein | VF |
| N5930_RS05735 (1191967) | 1191967..1194450 | + | 2484 | WP_000705505.1 | hypothetical protein | VF |
| N5930_RS05740 (1194491) | 1194491..1195234 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| N5930_RS05745 (1195231) | 1195231..1196307 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| N5930_RS05750 (1196451) | 1196451..1196963 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| N5930_RS05755 (1196950) | 1196950..1197708 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| N5930_RS05760 (1197918) | 1197918..1198760 | - | 843 | WP_000503690.1 | nickel/cobalt efflux protein RcnA | - |
| N5930_RS05765 (1198882) | 1198882..1199154 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| N5930_RS05770 (1199185) | 1199185..1200414 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| N5930_RS05775 (1200556) | 1200556..1201011 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| N5930_RS05780 (1201115) | 1201115..1201978 | + | 864 | WP_261742721.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |