MGE detailed information
MGE type: Prophage MGE length: 41836 bp
Accession: NZ_CP104641 Location: 2651043..2692878 Organism: Salmonella enterica strain 1019942 Replicon: chromosome
Accession: NZ_CP104641 Location: 2651043..2692878 Organism: Salmonella enterica strain 1019942 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5927_RS12915 () | 2646200..2647639 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| N5927_RS12920 () | 2647757..2647993 | + | 237 | WP_024131108.1 | YebV family protein | - |
| N5927_RS12925 () | 2648104..2648295 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| N5927_RS12930 () | 2648314..2648964 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| N5927_RS12935 () | 2649188..2649352 | - | 165 | WP_001134856.1 | membrane protein | - |
| N5927_RS12940 () | 2649637..2650359 | - | 723 | WP_000182071.1 | SPI-1 type III secretion system guanine nucleotide exchange factor SopE2 | - |
| N5927_RS12945 () | 2651043..2651438 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| N5927_RS12950 () | 2651768..2652244 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| N5927_RS12955 () | 2652617..2653036 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| N5927_RS12960 () | 2653409..2653678 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| N5927_RS12965 () | 2653844..2653984 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| N5927_RS12970 () | 2654130..2655337 | - | 1208 | Protein_2537 | IS256 family transposase ISEc39 | Transposase |
| N5927_RS12975 () | 2655407..2655873 | + | 467 | Protein_2538 | tyrosine-type recombinase/integrase | - |
| N5927_RS12980 () | 2657123..2658037 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| N5927_RS12985 () | 2658170..2658328 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| N5927_RS12990 () | 2658338..2658952 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| N5927_RS12995 () | 2659279..2659511 | - | 233 | Protein_2542 | helix-turn-helix domain-containing protein | - |
| N5927_RS13000 () | 2660120..2660221 | - | 102 | Protein_2543 | arsenic transporter | - |
| N5927_RS13005 () | 2660212..2660392 | + | 181 | Protein_2544 | IS3 family transposase | - |
| N5927_RS13010 () | 2660782..2660982 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| N5927_RS13015 () | 2661079..2661590 | - | 512 | Protein_2546 | tail fiber assembly protein | - |
| N5927_RS13020 () | 2661603..2661890 | - | 288 | Protein_2547 | macro domain-containing protein | - |
| N5927_RS13025 () | 2661900..2663131 | - | 1232 | Protein_2548 | tail fiber protein | - |
| N5927_RS13030 () | 2663130..2663697 | - | 568 | Protein_2549 | phage terminase large subunit family protein | - |
| N5927_RS13035 () | 2663684..2664175 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| N5927_RS13040 () | 2664230..2664418 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| N5927_RS13045 () | 2664483..2664650 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| N5927_RS13050 () | 2664907..2665440 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| N5927_RS13055 () | 2665494..2665685 | - | 192 | Protein_2554 | glycoside hydrolase family 19 protein | - |
| N5927_RS13060 () | 2665674..2666135 | + | 462 | Protein_2555 | DNA breaking-rejoining protein | - |
| N5927_RS13065 () | 2666399..2667321 | + | 923 | Protein_2556 | hypothetical protein ; Integrase | Integrase |
| N5927_RS13070 () | 2668266..2669066 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| N5927_RS13075 () | 2669095..2669336 | - | 242 | Protein_2558 | recombinase family protein | - |
| N5927_RS13080 () | 2669546..2670268 | + | 723 | WP_000161704.1 | CO-responsive transcriptional regulator RcoM | VF |
| N5927_RS13085 () | 2670470..2670814 | - | 345 | Protein_2560 | tail fiber assembly protein | - |
| N5927_RS13090 () | 2670819..2671682 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| N5927_RS13095 () | 2671722..2674053 | - | 2332 | Protein_2562 | host specificity protein J | - |
| N5927_RS13100 () | 2674053..2674313 | - | 261 | Protein_2563 | C40 family peptidase | - |
| N5927_RS13105 () | 2674323..2675018 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| N5927_RS13110 () | 2675108..2675641 | + | 534 | WP_000877926.1 | Polyketide biosynthesis acyl-carrier-protein AcpK | VF |
| N5927_RS13115 () | 2675758..2675937 | - | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| N5927_RS13120 () | 2676017..2676328 | - | 312 | Protein_2567 | DUF1441 family protein | - |
| N5927_RS13125 () | 2676536..2677015 | - | 480 | WP_001541990.1 | lysis protein | - |
| N5927_RS13130 () | 2677033..2677485 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| N5927_RS13135 () | 2677469..2677798 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| N5927_RS13140 () | 2678074..2678760 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| N5927_RS13145 () | 2679121..2679570 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| N5927_RS13150 () | 2679944..2680471 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| N5927_RS13155 () | 2680565..2681254 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| N5927_RS13160 () | 2681251..2681387 | - | 137 | Protein_2575 | YlcG family protein | - |
| N5927_RS13165 () | 2681384..2681524 | - | 141 | Protein_2576 | recombination protein NinG | - |
| N5927_RS13170 () | 2681608..2682207 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| N5927_RS13175 () | 2682271..2682489 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| N5927_RS13180 () | 2682791..2682889 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| N5927_RS13185 () | 2683208..2685187 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| N5927_RS13190 () | 2685601..2685879 | + | 279 | WP_001575998.1 | excisionase | - |
| N5927_RS13195 () | 2685854..2686933 | + | 1080 | WP_000087636.1 | Carnitine transport ATP-binding protein OpuCA ; Integrase | Integrase |
| - | 2687071..2687216 | + | 146 | - | - | Antitoxin Detail |
| - | 2687073..2687176 | - | 104 | - | - | Toxin Detail |
| N5927_RS13200 () | 2687316..2687669 | - | 354 | WP_000722370.1 | YebY family protein | - |
| N5927_RS13205 () | 2687686..2688561 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| N5927_RS13210 () | 2688562..2688936 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| N5927_RS13215 () | 2689074..2689304 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| N5927_RS13220 () | 2689412..2690068 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| N5927_RS13225 () | 2690092..2690790 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| N5927_RS13230 () | 2690827..2692878 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| N5927_RS13235 () | 2693091..2693750 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| N5927_RS13240 () | 2693844..2694197 | - | 354 | WP_001042123.1 | protein YebF | - |
| N5927_RS13245 () | 2694265..2694555 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| N5927_RS13250 () | 2694686..2695864 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| N5927_RS13255 () | 2695964..2696605 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|