MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33795 bp
Accession: NZ_CP104633 Location: 1..33795 Organism: Escherichia coli strain AHM21C2872I Replicon: plasmid pHNAH212872-3
Accession: NZ_CP104633 Location: 1..33795 Organism: Escherichia coli strain AHM21C2872I Replicon: plasmid pHNAH212872-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5855_RS26180 (N5855_26130) | 88..1182 | - | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| N5855_RS26185 (N5855_26135) | 1194..1910 | - | 717 | WP_000832280.1 | type IV secretion system protein | - |
| N5855_RS26190 (N5855_26140) | 1922..4669 | - | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| N5855_RS26195 (N5855_26145) | 4688..5014 | - | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| N5855_RS26200 (N5855_26150) | 5028..5648 | - | 621 | WP_001299949.1 | Type IV secretion system protein virB1 | VF |
| N5855_RS26205 (N5855_26155) | 5651..5827 | - | 177 | WP_000660496.1 | hypothetical protein | - |
| N5855_RS26210 (N5855_26160) | 6004..6219 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| N5855_RS26215 (N5855_26165) | 6216..6509 | - | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| N5855_RS26220 (N5855_26170) | 6586..7815 | - | 1230 | WP_058815700.1 | hypothetical protein | Relaxase |
| N5855_RS26225 (N5855_26175) | 7819..8322 | - | 504 | WP_000781818.1 | DNA distortion polypeptide 1 | - |
| N5855_RS26230 (N5855_26180) | 8685..8858 | - | 174 | WP_071821486.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| N5855_RS26235 (N5855_26185) | 9133..9498 | - | 366 | WP_000854262.1 | hypothetical protein | - |
| N5855_RS26240 (N5855_26190) | 9590..9889 | - | 300 | WP_000650313.1 | hypothetical protein | - |
| N5855_RS26245 (N5855_26195) | 10281..10508 | - | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| N5855_RS26250 (N5855_26200) | 10495..10746 | - | 252 | WP_001230708.1 | hypothetical protein | Toxin Detail |
| N5855_RS26255 (N5855_26205) | 10743..11285 | - | 543 | WP_001083908.1 | hypothetical protein | - |
| N5855_RS26260 (N5855_26210) | 11390..11905 | - | 516 | WP_001025396.1 | J domain-containing protein | - |
| N5855_RS26265 (N5855_26215) | 12544..12894 | - | 351 | WP_000127483.1 | hypothetical protein | - |
| N5855_RS26270 (N5855_26220) | 12891..13226 | - | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N5855_RS26275 (N5855_26225) | 14770..15777 | + | 1008 | WP_000243324.1 | replication initiation protein | - |
| N5855_RS26280 (N5855_26230) | 15843..16247 | + | 405 | WP_000654313.1 | hypothetical protein | - |
| N5855_RS26285 (N5855_26235) | 16383..16910 | + | 528 | WP_000577047.1 | DUF2726 domain-containing protein | - |
| N5855_RS26290 (N5855_26240) | 17482..17733 | - | 252 | WP_000905709.1 | hypothetical protein | - |
| N5855_RS26295 (N5855_26245) | 17770..18072 | - | 303 | WP_001062964.1 | hypothetical protein | - |
| N5855_RS26300 (N5855_26250) | 18238..18897 | - | 660 | WP_000516230.1 | hypothetical protein | VF |
| N5855_RS26305 (N5855_26255) | 19002..19826 | - | 825 | WP_016238959.1 | Tyrosine recombinase XerD | VF |
| N5855_RS26310 (N5855_26260) | 19911..20300 | - | 390 | WP_223196981.1 | hypothetical protein | - |
| N5855_RS26315 (N5855_26265) | 20383..21039 | - | 657 | WP_000972911.1 | hypothetical protein | - |
| N5855_RS26320 (N5855_26270) | 21143..21607 | - | 465 | WP_001293133.1 | H-NS family nucleoid-associated regulatory protein | - |
| N5855_RS26325 (N5855_26275) | 21623..21829 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| N5855_RS26330 (N5855_26280) | 21826..23979 | - | 2154 | WP_001235747.1 | type IA DNA topoisomerase | - |
| N5855_RS26335 (N5855_26285) | 23984..24556 | - | 573 | WP_001199073.1 | hypothetical protein | - |
| N5855_RS26340 (N5855_26290) | 24560..25822 | - | 1263 | WP_000517489.1 | AAA family ATPase | - |
| N5855_RS26345 (N5855_26295) | 25904..26398 | - | 495 | WP_001215681.1 | thermonuclease family protein | - |
| N5855_RS26350 (N5855_26300) | 26395..26703 | - | 309 | WP_000647577.1 | hypothetical protein | - |
| N5855_RS26355 (N5855_26305) | 26795..27061 | - | 267 | WP_219903652.1 | hypothetical protein | - |
| N5855_RS26360 (N5855_26310) | 27067..27372 | - | 306 | WP_024197659.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| N5855_RS26365 (N5855_26315) | 27356..27778 | - | 423 | WP_001328552.1 | cag pathogenicity island Cag12 family protein | - |
| N5855_RS26370 (N5855_26320) | 27787..29649 | - | 1863 | WP_000847103.1 | relaxosome-coupling protein TaxB | - |
| N5855_RS26375 (N5855_26325) | 29636..30664 | - | 1029 | WP_000017224.1 | Type IV secretion system protein VirB11 | VF |
| N5855_RS26380 (N5855_26330) | 30666..31784 | - | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| N5855_RS26385 (N5855_26335) | 31777..32685 | - | 909 | WP_001299943.1 | Type IV secretion system protein virB9 | VF |
| N5855_RS26390 (N5855_26340) | 32682..33368 | - | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|