MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 100861 bp
Accession: NZ_CP104632 Location: 1..100861 Organism: Escherichia coli strain AHM21C2872I Replicon: plasmid pHNAH212872-2
Accession: NZ_CP104632 Location: 1..100861 Organism: Escherichia coli strain AHM21C2872I Replicon: plasmid pHNAH212872-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5855_RS25560 (2) | 2..589 | + | 588 | Protein_0 | hypothetical protein | VF |
| N5855_RS25565 (665) | 665..4942 | + | 4278 | WP_231236798.1 | Protein RhsD | VF |
| N5855_RS25570 (5061) | 5061..6071 | + | 1011 | WP_001695458.1 | Secretory immunoglobulin A-binding protein EsiB | VF |
| N5855_RS25575 (6375) | 6375..6743 | + | 369 | Protein_3 | ISAs1 family transposase ISEc1 | Transposase |
| N5855_RS25580 (6801) | 6801..7571 | - | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| N5855_RS25585 (7752) | 7752..8198 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| N5855_RS25590 (8241) | 8241..10685 | - | 2445 | WP_000973081.1 | Acyl-coenzyme A dehydrogenase | VF |
| N5855_RS25595 (10925) | 10925..11503 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| N5855_RS25600 (11709) | 11709..12476 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| N5855_RS25605 (12447) | 12447..13187 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| N5855_RS25610 (13343) | 13343..13621 | - | 279 | WP_000615980.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| N5855_RS25615 (13624) | 13624..13884 | - | 261 | WP_000729709.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| N5855_RS25620 (14094) | 14094..14843 | + | 750 | WP_000056850.1 | Murein DD-endopeptidase MepH | VF |
| N5855_RS25625 (15019) | 15019..15516 | + | 498 | WP_021556447.1 | REP-associated tyrosine transposase RayT | - |
| N5855_RS25630 (15709) | 15709..17802 | - | 2094 | WP_021556448.1 | Flagellar biosynthesis protein FlhA | VF |
| N5855_RS25635 (17786) | 17786..18925 | - | 1140 | WP_021556449.1 | Flagellar biosynthetic protein FlhB | VF |
| N5855_RS25640 (18915) | 18915..19697 | - | 783 | WP_021556450.1 | Surface presentation of antigens protein SpaR | VF |
| N5855_RS25645 (19699) | 19699..19971 | - | 273 | WP_000958542.1 | hypothetical protein | VF |
| N5855_RS25650 (19974) | 19974..20726 | - | 753 | WP_021556451.1 | Flagellar biosynthetic protein FliP | VF |
| N5855_RS25655 (20723) | 20723..21094 | - | 372 | WP_021556452.1 | Flagellar motor switch protein FliN | VF |
| N5855_RS25660 (21087) | 21087..21938 | - | 852 | WP_000922510.1 | FliM/FliN family flagellar motor switch protein | - |
| N5855_RS25665 (22325) | 22325..23302 | + | 978 | WP_021556453.1 | Nitrogen fixation protein VnfA | VF |
| N5855_RS25670 (23317) | 23317..23658 | + | 342 | WP_000029084.1 | Flagellar hook-basal body complex protein FliE | VF |
| N5855_RS25675 (23663) | 23663..25309 | + | 1647 | WP_021556454.1 | Flagellar M-ring protein | VF |
| N5855_RS25680 (25287) | 25287..26297 | + | 1011 | WP_021556455.1 | Flagellar motor switch protein FliG | VF |
| N5855_RS25685 (26301) | 26301..27011 | + | 711 | WP_021556456.1 | hypothetical protein | VF |
| N5855_RS25690 (27004) | 27004..28344 | + | 1341 | WP_021556457.1 | Flagellum-specific ATP synthase | VF |
| N5855_RS25695 (28347) | 28347..28781 | + | 435 | WP_021556458.1 | flagellar export protein FliJ | - |
| N5855_RS25700 (28784) | 28784..29179 | + | 396 | WP_021556459.1 | Glycerol-3-phosphate cytidylyltransferase | VF |
| N5855_RS25705 (29191) | 29191..29730 | - | 540 | WP_024227127.1 | hypothetical protein | - |
| N5855_RS25710 (29817) | 29817..30455 | - | 639 | WP_021556461.1 | hypothetical protein | - |
| N5855_RS25715 (30572) | 30572..31072 | - | 501 | WP_021556462.1 | hypothetical protein | - |
| N5855_RS25720 (31165) | 31165..31545 | - | 381 | WP_152921016.1 | hypothetical protein | - |
| N5855_RS25725 (32044) | 32044..34488 | - | 2445 | WP_021556464.1 | glycosyltransferase | - |
| N5855_RS25730 (34648) | 34648..35577 | - | 930 | WP_021556465.1 | hypothetical protein | - |
| N5855_RS25735 (35705) | 35705..36133 | - | 429 | WP_040234519.1 | flagellar protein FlgN | - |
| N5855_RS25740 (36146) | 36146..36424 | - | 279 | WP_021556467.1 | hypothetical protein | VF |
| N5855_RS25745 (36505) | 36505..37242 | - | 738 | WP_021556468.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| N5855_RS25750 (37324) | 37324..37659 | + | 336 | WP_000512950.1 | Flagellar basal body rod protein FlgB | VF |
| N5855_RS25755 (37662) | 37662..38093 | + | 432 | WP_021556469.1 | Flagellar basal-body rod protein FlgC | VF |
| N5855_RS25760 (38093) | 38093..38830 | + | 738 | WP_021556470.1 | flagellar hook capping FlgD N-terminal domain-containing protein | - |
| N5855_RS25765 (39270) | 39270..40472 | + | 1203 | WP_021556471.1 | Flagellar hook protein FlgE | VF |
| N5855_RS25770 (40472) | 40472..41209 | + | 738 | WP_000375465.1 | Flagellar basal-body rod protein FlgF | VF |
| N5855_RS25775 (41388) | 41388..42173 | + | 786 | WP_000990540.1 | Flagellar basal-body rod protein FlgG | VF |
| N5855_RS25780 (42256) | 42256..42921 | + | 666 | WP_000800864.1 | Flagellar L-ring protein | VF |
| N5855_RS25785 (42936) | 42936..44036 | + | 1101 | WP_021556472.1 | Flagellar P-ring protein | VF |
| N5855_RS25790 (44036) | 44036..44335 | + | 300 | WP_000867179.1 | Peptidoglycan hydrolase FlgJ | VF |
| N5855_RS25795 (44719) | 44719..46095 | + | 1377 | WP_021556473.1 | Flagellar hook-associated protein 1 | VF |
| N5855_RS25800 (46110) | 46110..47039 | + | 930 | WP_040234521.1 | flagellar hook-associated protein FlgL | - |
| N5855_RS25805 (47056) | 47056..48033 | + | 978 | WP_040234522.1 | hypothetical protein | - |
| N5855_RS25810 (48123) | 48123..48212 | + | 90 | Protein_50 | transcriptional regulator | - |
| N5855_RS25815 (48336) | 48336..49178 | - | 843 | WP_040234523.1 | hypothetical protein | VF |
| N5855_RS25820 (49664) | 49664..50578 | + | 915 | WP_000949083.1 | Flagellin 1 | VF |
| N5855_RS25825 (50868) | 50868..52184 | + | 1317 | WP_040234524.1 | Flagellar hook-associated protein 2 | VF |
| N5855_RS25830 (52207) | 52207..52599 | + | 393 | WP_000285319.1 | Flagellar secretion chaperone FliS | VF |
| N5855_RS25835 (52604) | 52604..52915 | + | 312 | WP_000414997.1 | hypothetical protein | - |
| N5855_RS25840 (52912) | 52912..53973 | + | 1062 | WP_040234525.1 | hypothetical protein | VF |
| N5855_RS25845 (53981) | 53981..54448 | + | 468 | WP_000725257.1 | flagellar basal body-associated FliL family protein | - |
| N5855_RS25850 (54468) | 54468..55184 | + | 717 | WP_000938725.1 | RNA polymerase sigma factor for flagellar operon | VF |
| N5855_RS25855 (55197) | 55197..56060 | + | 864 | WP_001169519.1 | Chemotaxis protein LafT | VF |
| N5855_RS25860 (56063) | 56063..56986 | + | 924 | WP_001232555.1 | Chemotaxis protein LafU | VF |
| N5855_RS25865 (57057) | 57057..58112 | + | 1056 | WP_040234527.1 | DNA polymerase IV | - |
| N5855_RS25870 (58109) | 58109..58561 | + | 453 | WP_071843974.1 | GNAT family N-acetyltransferase | - |
| N5855_RS25875 (58880) | 58880..59083 | + | 204 | Protein_63 | RtcB family protein | - |
| N5855_RS25880 (59082) | 59082..59603 | + | 522 | Protein_64 | peptide chain release factor H | - |
| N5855_RS25885 (59660) | 59660..61117 | - | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| N5855_RS25890 (61378) | 61378..61836 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (62432) | 62432..62512 | + | 81 | NuclAT_0 | - | - |
| - (62432) | 62432..62512 | + | 81 | NuclAT_0 | - | - |
| - (62432) | 62432..62512 | + | 81 | NuclAT_0 | - | - |
| - (62432) | 62432..62512 | + | 81 | NuclAT_0 | - | - |
| N5855_RS25895 (61928) | 61928..63172 | + | 1245 | WP_000189542.1 | esterase FrsA | - |
| N5855_RS25900 (63230) | 63230..63631 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| N5855_RS25905 (63670) | 63670..64725 | - | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| N5855_RS25910 (65013) | 65013..66116 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| N5855_RS25915 (66128) | 66128..67381 | + | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| N5855_RS25925 (67586) | 67586..68704 | - | 1119 | WP_001132557.1 | tyrosine-type recombinase/integrase | - |
| N5855_RS25930 (68626) | 68626..68976 | - | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| N5855_RS25935 (68976) | 68976..69281 | - | 306 | WP_000206732.1 | protein YfdT | - |
| N5855_RS25940 (69281) | 69281..69643 | - | 363 | WP_001242749.1 | phage protein | - |
| N5855_RS25945 (69634) | 69634..70170 | - | 537 | WP_000008236.1 | 5'-deoxynucleotidase | - |
| N5855_RS25950 (70252) | 70252..70571 | - | 320 | Protein_77 | hypothetical protein | - |
| N5855_RS25955 (70715) | 70715..71149 | + | 435 | WP_000016389.1 | hypothetical protein | - |
| N5855_RS25960 (71121) | 71121..71327 | - | 207 | WP_000549623.1 | hypothetical protein | - |
| N5855_RS25965 (71667) | 71667..72359 | - | 693 | WP_001020634.1 | S24 family peptidase | - |
| N5855_RS25970 (72457) | 72457..72717 | + | 261 | WP_001191674.1 | helix-turn-helix transcriptional regulator | - |
| N5855_RS25975 (72710) | 72710..73267 | + | 558 | WP_000515851.1 | protein YmfL | - |
| N5855_RS25980 (73443) | 73443..73622 | + | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| N5855_RS25985 (73612) | 73612..74553 | + | 942 | WP_000104967.1 | helix-turn-helix domain-containing protein | - |
| N5855_RS25990 (74550) | 74550..75044 | + | 495 | WP_284657693.1 | PerC family transcriptional regulator | - |
| N5855_RS25995 (75044) | 75044..75697 | + | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| N5855_RS26000 (75694) | 75694..76020 | + | 327 | WP_000210154.1 | LexA family transcriptional regulator | - |
| N5855_RS26005 (76017) | 76017..76406 | + | 390 | WP_000767124.1 | RusA family crossover junction endodeoxyribonuclease | - |
| N5855_RS26010 (76426) | 76426..77235 | + | 810 | WP_001061380.1 | KilA-N domain-containing protein | - |
| N5855_RS26015 (77243) | 77243..78232 | + | 990 | WP_032249117.1 | DUF968 domain-containing protein | - |
| N5855_RS26020 (78247) | 78247..78615 | + | 369 | WP_085949407.1 | antiterminator Q family protein | - |
| N5855_RS26025 (78651) | 78651..79100 | - | 450 | WP_001208502.1 | hypothetical protein | - |
| N5855_RS26030 (79122) | 79122..80063 | - | 942 | WP_104920102.1 | hypothetical protein | - |
| N5855_RS26035 (80360) | 80360..80686 | + | 327 | WP_001120496.1 | phage holin, lambda family | - |
| N5855_RS26040 (80690) | 80690..81172 | + | 483 | WP_001407088.1 | glycoside hydrolase family protein | - |
| N5855_RS26045 (81165) | 81165..81629 | + | 465 | WP_023566046.1 | lysis protein | - |
| N5855_RS26050 (81711) | 81711..82469 | + | 759 | WP_001407090.1 | hypothetical protein | - |
| N5855_RS26055 (82540) | 82540..82890 | + | 351 | WP_001407091.1 | HNH endonuclease | - |
| N5855_RS26060 (83016) | 83016..83501 | + | 486 | WP_063073508.1 | phage terminase small subunit P27 family | - |
| N5855_RS26065 (83515) | 83515..85248 | + | 1734 | WP_000088150.1 | terminase large subunit | - |
| N5855_RS26070 (85260) | 85260..85442 | + | 183 | WP_000605605.1 | protein YmfR | - |
| N5855_RS26075 (85442) | 85442..86683 | + | 1242 | WP_000466255.1 | phage portal protein | - |
| N5855_RS26080 (86661) | 86661..87311 | + | 651 | WP_001193640.1 | HK97 family phage prohead protease | - |
| N5855_RS26085 (87326) | 87326..88531 | + | 1206 | WP_063073507.1 | phage major capsid protein | - |
| N5855_RS26090 (88581) | 88581..88781 | + | 201 | WP_000601360.1 | hypothetical protein | - |
| N5855_RS26095 (88784) | 88784..89107 | + | 324 | WP_000927711.1 | head-tail connector protein | - |
| N5855_RS26100 (89104) | 89104..89514 | + | 411 | WP_000702401.1 | phage head closure protein | - |
| N5855_RS26105 (89489) | 89489..89995 | + | 507 | WP_000224836.1 | hypothetical protein | - |
| N5855_RS26110 (89992) | 89992..90552 | + | 561 | WP_089569369.1 | hypothetical protein | - |
| N5855_RS26115 (90561) | 90561..90731 | + | 171 | WP_063073505.1 | DUF2635 domain-containing protein | - |
| N5855_RS26120 (90715) | 90715..92211 | + | 1497 | WP_063073504.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| N5855_RS26125 (92211) | 92211..92567 | + | 357 | WP_000090998.1 | phage tail tube protein | - |
| N5855_RS26130 (92567) | 92567..92836 | + | 270 | WP_000661054.1 | phage tail assembly protein | - |
| N5855_RS26135 (92978) | 92978..94759 | + | 1782 | WP_063073503.1 | phage tail tape measure protein | - |
| N5855_RS26140 (94841) | 94841..95518 | + | 678 | WP_040072272.1 | hypothetical protein | - |
| N5855_RS26145 (95572) | 95572..96900 | + | 1329 | WP_063073501.1 | DNA circularization N-terminal domain-containing protein | - |
| N5855_RS26150 (96897) | 96897..97976 | + | 1080 | WP_063073500.1 | baseplate protein | - |
| N5855_RS26155 (97976) | 97976..98524 | + | 549 | WP_052921837.1 | phage baseplate assembly protein V | - |
| N5855_RS26160 (98524) | 98524..98949 | + | 426 | WP_000424744.1 | phage GP46 family protein | - |
| N5855_RS26165 (98936) | 98936..99994 | + | 1059 | WP_028125900.1 | baseplate J/gp47 family protein | - |
| N5855_RS26170 (99985) | 99985..100569 | + | 585 | WP_063073499.1 | YmfQ family protein | - |
| N5855_RS26175 (100573) | 100573..100860 | + | 288 | Protein_122 | protein StfP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|