MGE detailed information
MGE type: Genomic_island MGE length: 15147 bp
Accession: NZ_CP104629 Location: 3532520..3547666 Organism: Escherichia coli strain AHM21C2872I Replicon: chromosome
Accession: NZ_CP104629 Location: 3532520..3547666 Organism: Escherichia coli strain AHM21C2872I Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5855_RS17030 (3528573) | 3528573..3529517 | + | 945 | WP_000947082.1 | nickel ABC transporter permease subunit NikB | - |
| N5855_RS17035 (3529514) | 3529514..3530347 | + | 834 | WP_001008963.1 | nickel ABC transporter permease subunit NikC | - |
| N5855_RS17040 (3530347) | 3530347..3531111 | + | 765 | WP_001136211.1 | nickel import ATP-binding protein NikD | - |
| N5855_RS17045 (3531108) | 3531108..3531914 | + | 807 | WP_021557287.1 | nickel import ATP-binding protein NikE | - |
| N5855_RS17050 (3531920) | 3531920..3532321 | + | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| N5855_RS17055 (3532520) | 3532520..3533266 | + | 747 | WP_001308115.1 | GntR family transcriptional regulator | - |
| N5855_RS17060 (3533291) | 3533291..3533764 | + | 474 | WP_001161650.1 | PTS sugar transporter subunit IIA | - |
| N5855_RS17065 (3533761) | 3533761..3534042 | + | 282 | WP_000084025.1 | PTS sugar transporter subunit IIB | - |
| N5855_RS17070 (3534119) | 3534119..3535477 | + | 1359 | WP_001308116.1 | PTS galactitol transporter subunit IIC | - |
| N5855_RS17075 (3535470) | 3535470..3536978 | + | 1509 | WP_021557288.1 | FGGY-family carbohydrate kinase | - |
| N5855_RS17080 (3536968) | 3536968..3537237 | + | 270 | WP_000933060.1 | HPr family phosphocarrier protein | - |
| N5855_RS17085 (3537269) | 3537269..3538129 | + | 861 | WP_021557289.1 | class II aldolase | - |
| N5855_RS17090 (3538179) | 3538179..3538538 | - | 360 | WP_000593555.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| N5855_RS17095 (3538535) | 3538535..3538810 | - | 276 | WP_001259382.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| N5855_RS17100 (3538883) | 3538883..3540007 | - | 1125 | WP_021557290.1 | ABC transporter permease | - |
| N5855_RS17105 (3540007) | 3540007..3542742 | - | 2736 | WP_000149130.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| N5855_RS17110 (3542739) | 3542739..3543806 | - | 1068 | WP_000361517.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| N5855_RS17115 (3543869) | 3543869..3543982 | - | 114 | WP_212736213.1 | hypothetical protein | - |
| N5855_RS17120 (3544172) | 3544172..3545794 | - | 1623 | WP_021557291.1 | DUF4049 domain-containing protein | - |
| N5855_RS17125 (3546056) | 3546056..3547666 | - | 1611 | WP_021557292.1 | DUF4049 domain-containing protein | - |
| N5855_RS17130 (3548049) | 3548049..3549101 | + | 1053 | WP_001028905.1 | DUF2776 domain-containing protein | - |
| N5855_RS17135 (3549418) | 3549418..3550620 | - | 1203 | WP_000439188.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| N5855_RS17140 (3550852) | 3550852..3552351 | + | 1500 | WP_000902780.1 | inorganic phosphate transporter PitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|