MGE detailed information
MGE type: Genomic_island MGE length: 9562 bp
Accession: NZ_CP104629 Location: 3180083..3189644 Organism: Escherichia coli strain AHM21C2872I Replicon: chromosome
Accession: NZ_CP104629 Location: 3180083..3189644 Organism: Escherichia coli strain AHM21C2872I Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5855_RS15220 (3175915) | 3175915..3177246 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| N5855_RS15225 (3177268) | 3177268..3178257 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| N5855_RS15230 (3178356) | 3178356..3179294 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| N5855_RS15235 (3179609) | 3179609..3179827 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| N5855_RS15240 (3180083) | 3180083..3180622 | + | 540 | WP_000675745.1 | protein YhaB | - |
| N5855_RS15245 (3180644) | 3180644..3181832 | + | 1189 | Protein_2988 | YhaC family protein | - |
| N5855_RS15255 (3182468) | 3182468..3183613 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| N5855_RS15260 (3183710) | 3183710..3184600 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| N5855_RS15265 (3184630) | 3184630..3185400 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| N5855_RS15270 (3185416) | 3185416..3186750 | - | 1335 | WP_000599633.1 | galactarate/glucarate/glycerate transporter GarP | - |
| N5855_RS15275 (3187125) | 3187125..3188696 | + | 1572 | WP_001273763.1 | galactarate dehydratase | - |
| N5855_RS15280 (3188845) | 3188845..3189180 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| N5855_RS15285 (3189180) | 3189180..3189644 | + | 465 | WP_000347278.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| N5855_RS15290 (3189699) | 3189699..3190508 | - | 810 | WP_000072174.1 | aga operon transcriptional regulator AgaR | - |
| N5855_RS15295 (3190757) | 3190757..3192037 | + | 1281 | WP_021557243.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| N5855_RS15300 (3192060) | 3192060..3192533 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| N5855_RS15305 (3192544) | 3192544..3193323 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| N5855_RS15310 (3193313) | 3193313..3194191 | + | 879 | WP_021557244.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| N5855_RS15315 (3194209) | 3194209..3194643 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|