MGE detailed information
MGE type: Genomic_island MGE length: 100800 bp
Accession: NZ_CP104629 Location: 2914541..3015340 Organism: Escherichia coli strain AHM21C2872I Replicon: chromosome
Accession: NZ_CP104629 Location: 2914541..3015340 Organism: Escherichia coli strain AHM21C2872I Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5855_RS13945 (2909912) | 2909912..2911096 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| N5855_RS13950 (2911246) | 2911246..2912256 | + | 1011 | WP_000053333.1 | substrate-binding domain-containing protein | - |
| N5855_RS13955 (2912352) | 2912352..2914478 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| N5855_RS13960 (2914541) | 2914541..2915818 | + | 1278 | WP_001083367.1 | MFS transporter | - |
| N5855_RS13965 (2915818) | 2915818..2917248 | + | 1431 | WP_000813679.1 | glycoside hydrolase family 32 protein | - |
| N5855_RS13970 (2917443) | 2917443..2918837 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| N5855_RS13975 (2918911) | 2918911..2919087 | + | 177 | WP_162843692.1 | hypothetical protein | - |
| N5855_RS13980 (2919287) | 2919287..2920078 | - | 792 | WP_029402616.1 | BRO family protein | - |
| N5855_RS13985 (2920404) | 2920404..2921617 | + | 1214 | WP_176398902.1 | IS3 family transposase IS629 | Transposase |
| N5855_RS13990 (2921757) | 2921757..2922479 | - | 723 | WP_087526105.1 | outer membrane beta-barrel protein | - |
| N5855_RS13995 (2922720) | 2922720..2923088 | - | 369 | WP_001275820.1 | hypothetical protein | - |
| N5855_RS14000 (2923371) | 2923371..2923549 | + | 179 | Protein_2740 | integrase | - |
| N5855_RS14005 (2923772) | 2923772..2924668 | - | 897 | WP_000499116.1 | hypothetical protein | - |
| N5855_RS14010 (2924668) | 2924668..2926290 | - | 1623 | WP_029402510.1 | AAA family ATPase | - |
| N5855_RS14015 (2926299) | 2926299..2927456 | - | 1158 | WP_000118785.1 | restriction endonuclease subunit S | - |
| N5855_RS14020 (2927453) | 2927453..2929087 | - | 1635 | WP_000627727.1 | class I SAM-dependent DNA methyltransferase | - |
| N5855_RS14025 (2929151) | 2929151..2932564 | - | 3414 | WP_063084576.1 | DEAD/DEAH box helicase family protein | - |
| N5855_RS14030 (2933172) | 2933172..2933686 | + | 515 | Protein_2746 | ISL3 family transposase ISEc38 | Transposase |
| N5855_RS14035 (2933989) | 2933989..2934252 | - | 264 | WP_000676590.1 | MazG-like family protein | - |
| N5855_RS14040 (2934719) | 2934719..2935801 | + | 1083 | WP_000637420.1 | XRE family transcriptional regulator | - |
| N5855_RS14045 (2935804) | 2935804..2936748 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| N5855_RS14050 (2936745) | 2936745..2937725 | - | 981 | WP_033873469.1 | thymidylate synthase | - |
| N5855_RS14055 (2937893) | 2937893..2939054 | + | 1162 | Protein_2751 | IS3 family transposase ISEc17 | Transposase |
| N5855_RS14060 (2939308) | 2939308..2940420 | - | 1113 | WP_040235221.1 | porin OmpC | - |
| N5855_RS14065 (2940657) | 2940657..2941113 | - | 457 | Protein_2753 | zinc ribbon domain-containing protein | - |
| N5855_RS14070 (2941619) | 2941619..2942878 | + | 1260 | WP_040235219.1 | S-methyl-5-thioribose kinase | - |
| N5855_RS14075 (2942888) | 2942888..2944003 | + | 1116 | WP_040235217.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| N5855_RS14080 (2944034) | 2944034..2944675 | + | 642 | WP_040235215.1 | L-fuculose-phosphate aldolase | - |
| N5855_RS14085 (2944779) | 2944779..2945783 | + | 1005 | WP_040235213.1 | GRP family sugar transporter | - |
| N5855_RS14090 (2945824) | 2945824..2946810 | - | 987 | WP_040235211.1 | sugar-binding transcriptional regulator | - |
| N5855_RS14095 (2947157) | 2947157..2948506 | - | 1350 | WP_040235209.1 | GntP family permease | - |
| N5855_RS14100 (2948613) | 2948613..2950580 | - | 1968 | WP_040235208.1 | xylonate dehydratase YjhG | - |
| N5855_RS14105 (2950591) | 2950591..2951496 | - | 906 | WP_040235339.1 | dihydrodipicolinate synthase family protein | - |
| N5855_RS14110 (2951501) | 2951501..2952289 | - | 789 | WP_040235207.1 | IclR family transcriptional regulator | - |
| N5855_RS14115 (2952592) | 2952592..2953374 | - | 783 | WP_040235206.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| N5855_RS14120 (2953391) | 2953391..2953759 | - | 369 | Protein_2764 | epimerase | - |
| N5855_RS14125 (2953759) | 2953759..2954703 | + | 945 | Protein_2765 | PTS ascorbate transporter subunit IIC | - |
| N5855_RS14130 (2954950) | 2954950..2955108 | - | 159 | Protein_2766 | IS66 family transposase IS682 | Transposase |
| N5855_RS14135 (2955378) | 2955378..2955694 | + | 317 | Protein_2767 | hypothetical protein | - |
| N5855_RS14140 (2955763) | 2955763..2955858 | + | 96 | Protein_2768 | AlpA family transcriptional regulator | - |
| N5855_RS14145 (2955859) | 2955859..2956832 | - | 974 | Protein_2769 | IS66 family transposase ISEc49 | Transposase |
| N5855_RS14150 (2956857) | 2956857..2957192 | - | 336 | Protein_2770 | IS66 family insertion sequence element accessory protein TnpB | - |
| N5855_RS14155 (2957179) | 2957179..2957508 | - | 330 | WP_040235205.1 | IS66 family transposase ISEc49 | Transposase |
| N5855_RS14160 (2957616) | 2957616..2958533 | - | 918 | WP_040235204.1 | LysR substrate-binding domain-containing protein | - |
| N5855_RS14165 (2958669) | 2958669..2959940 | + | 1272 | WP_040235202.1 | C4-dicarboxylate transporter DcuC | - |
| N5855_RS14170 (2959953) | 2959953..2961263 | + | 1311 | WP_040235201.1 | amidohydrolase | - |
| N5855_RS14175 (2961609) | 2961609..2962043 | + | 435 | WP_040235200.1 | IS66 family transposase ISEc43 | Transposase |
| N5855_RS14180 (2962040) | 2962040..2962390 | + | 351 | WP_087526125.1 | IS66 family transposase IS682 | Transposase |
| N5855_RS14185 (2962421) | 2962421..2964013 | + | 1593 | WP_001593684.1 | IS66 family transposase ISEc23 | Transposase |
| N5855_RS14190 (2964109) | 2964109..2964456 | - | 348 | WP_000612556.1 | IS66 family transposase ISEc8 | Transposase |
| N5855_RS14195 (2964453) | 2964453..2964833 | - | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| N5855_RS14200 (2964998) | 2964998..2965168 | - | 171 | Protein_2780 | IS66 family transposase ISSfl3 | Transposase |
| N5855_RS14205 (2965413) | 2965413..2965613 | - | 201 | Protein_2781 | DUF4198 domain-containing protein | - |
| N5855_RS14210 (2965644) | 2965644..2967215 | - | 1572 | WP_284591697.1 | IS66 family transposase ISCro1 | Transposase |
| N5855_RS14215 (2967235) | 2967235..2967582 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| N5855_RS14220 (2967582) | 2967582..2968259 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| N5855_RS14225 (2968315) | 2968315..2968911 | - | 597 | Protein_2785 | DUF4198 domain-containing protein | - |
| N5855_RS14230 (2968930) | 2968930..2970900 | - | 1971 | WP_001313270.1 | Vitamin B12 transporter BtuB | VF |
| N5855_RS14235 (2971067) | 2971067..2972110 | - | 1044 | Protein_2787 | DDE-type integrase/transposase/recombinase | - |
| N5855_RS14240 (2972365) | 2972365..2973593 | + | 1229 | WP_085959875.1 | IS3 family transposase IS2 | Transposase |
| N5855_RS14245 (2974224) | 2974224..2974379 | - | 156 | WP_232380132.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| N5855_RS14250 (2974580) | 2974580..2975896 | + | 1317 | WP_087526093.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| N5855_RS14255 (2976035) | 2976035..2977032 | + | 998 | Protein_2791 | IS110 family transposase | - |
| N5855_RS14260 (2977391) | 2977391..2978734 | + | 1344 | WP_000551919.1 | esterase-like activity of phytase family protein | - |
| N5855_RS14265 (2978891) | 2978891..2979715 | - | 825 | WP_001293447.1 | MurR/RpiR family transcriptional regulator | - |
| N5855_RS14270 (2979881) | 2979881..2981437 | + | 1557 | WP_000983423.1 | maltose/glucose-specific PTS transporter subunit IIC | - |
| N5855_RS14275 (2981437) | 2981437..2982126 | + | 690 | WP_000859647.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| N5855_RS14280 (2982631) | 2982631..2982969 | + | 339 | WP_000760916.1 | c-type lysozyme inhibitor | - |
| N5855_RS14285 (2983354) | 2983354..2983809 | - | 456 | WP_000884152.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| N5855_RS14290 (2983871) | 2983871..2985229 | - | 1359 | WP_000919997.1 | hypothetical protein | VF |
| N5855_RS14295 (2986092) | 2986092..2986267 | - | 176 | Protein_2799 | transposase | - |
| N5855_RS14300 (2986456) | 2986456..2987409 | - | 954 | WP_000609007.1 | transketolase family protein | - |
| N5855_RS14305 (2987402) | 2987402..2988232 | - | 831 | WP_001101067.1 | transketolase | - |
| N5855_RS14310 (2988229) | 2988229..2989617 | - | 1389 | WP_000470229.1 | PTS ascorbate transporter subunit IIC | - |
| N5855_RS14315 (2989640) | 2989640..2989912 | - | 273 | WP_000699820.1 | PTS sugar transporter subunit IIB | - |
| N5855_RS14320 (2989991) | 2989991..2990434 | - | 444 | WP_001317566.1 | PTS sugar transporter subunit IIA | - |
| N5855_RS14325 (2990692) | 2990692..2991711 | + | 1020 | WP_001018808.1 | LacI family DNA-binding transcriptional regulator | - |
| N5855_RS14330 (2992307) | 2992307..2992498 | + | 192 | WP_001366542.1 | hypothetical protein | - |
| N5855_RS14335 (2992567) | 2992567..2992815 | + | 249 | WP_089078673.1 | ProQ/FINO family protein | - |
| N5855_RS14340 (2992833) | 2992833..2993381 | - | 549 | WP_001167444.1 | hypothetical protein | - |
| N5855_RS14345 (2993659) | 2993659..2993892 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| N5855_RS14350 (2993916) | 2993916..2994533 | - | 618 | WP_001593693.1 | hypothetical protein | - |
| N5855_RS14355 (2994791) | 2994791..2995357 | - | 567 | WP_001126822.1 | inovirus-type Gp2 protein | - |
| N5855_RS14360 (2996493) | 2996493..2997706 | - | 1214 | Protein_2812 | IS3 family transposase | - |
| N5855_RS14365 (2997744) | 2997744..2998908 | + | 1165 | Protein_2813 | IS256 family transposase ISSod4 | Transposase |
| N5855_RS14370 (2999088) | 2999088..3001136 | - | 2049 | WP_000792543.1 | TonB-dependent siderophore receptor IreA | - |
| N5855_RS14375 (3001329) | 3001329..3002557 | + | 1229 | WP_153275894.1 | IS3 family transposase IS2 | Transposase |
| N5855_RS14380 (3002668) | 3002668..3003399 | - | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| N5855_RS14385 (3004069) | 3004069..3004599 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| N5855_RS14390 (3005763) | 3005763..3006986 | - | 1224 | WP_001107214.1 | hypothetical protein | - |
| N5855_RS14395 (3007087) | 3007087..3007971 | + | 885 | WP_001116802.1 | YfjP family GTPase | - |
| N5855_RS14400 (3008174) | 3008174..3008854 | + | 681 | WP_001593697.1 | WYL domain-containing protein | - |
| N5855_RS14405 (3009002) | 3009002..3009679 | + | 678 | WP_001097302.1 | hypothetical protein | - |
| N5855_RS14410 (3009685) | 3009685..3009918 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| N5855_RS14415 (3010008) | 3010008..3010826 | + | 819 | WP_001175148.1 | DUF932 domain-containing protein | - |
| N5855_RS14420 (3010908) | 3010908..3011387 | + | 480 | WP_000844100.1 | antirestriction protein | - |
| N5855_RS14425 (3011399) | 3011399..3011875 | + | 477 | WP_122994424.1 | RadC family protein | - |
| N5855_RS14430 (3011938) | 3011938..3012159 | + | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| N5855_RS14435 (3012239) | 3012239..3012613 | + | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| N5855_RS14440 (3012660) | 3012660..3013037 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| N5855_RS14445 (3013034) | 3013034..3013522 | + | 489 | WP_000761677.1 | DUF5983 family protein | - |
| N5855_RS14450 (3013534) | 3013534..3013731 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| N5855_RS14455 (3013816) | 3013816..3014682 | + | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| N5855_RS14460 (3014754) | 3014754..3015017 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| N5855_RS14465 (3015014) | 3015014..3015340 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N5855_RS14470 (3015755) | 3015755..3016291 | - | 537 | WP_000942790.1 | GspM family type II secretion system protein YghD | - |
| N5855_RS14475 (3016293) | 3016293..3017471 | - | 1179 | WP_021557196.1 | type II secretion system protein GspL | - |
| N5855_RS14480 (3017468) | 3017468..3018445 | - | 978 | WP_021557197.1 | type II secretion system minor pseudopilin GspK | - |
| N5855_RS14485 (3018442) | 3018442..3019047 | - | 606 | WP_021557198.1 | type II secretion system minor pseudopilin GspJ | - |
| N5855_RS14490 (3019044) | 3019044..3019415 | - | 372 | WP_021557199.1 | type II secretion system minor pseudopilin GspI | - |
| N5855_RS14495 (3019412) | 3019412..3019975 | - | 564 | WP_001613816.1 | type II secretion system minor pseudopilin GspH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|