MGE detailed information
MGE type: Genomic_island MGE length: 15859 bp
Accession: NZ_CP104618 Location: 4007765..4023623 Organism: Escherichia coli strain AHM9C68I Replicon: chromosome
Accession: NZ_CP104618 Location: 4007765..4023623 Organism: Escherichia coli strain AHM9C68I Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5859_RS19590 (4005370) | 4005370..4006095 | - | 726 | WP_072646071.1 | type 1 fimbria chaperone FimC | - |
| N5859_RS19595 (4006132) | 4006132..4006671 | - | 540 | WP_124846258.1 | fimbrial protein | - |
| N5859_RS19600 (4006736) | 4006736..4007284 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| N5859_RS19605 (4007765) | 4007765..4008361 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| N5859_RS19610 (4008839) | 4008839..4009441 | - | 603 | WP_032161359.1 | hypothetical protein | VF |
| N5859_RS19615 (4010897) | 4010897..4011613 | + | 717 | WP_001443018.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| N5859_RS19620 (4011633) | 4011633..4012739 | + | 1107 | WP_001355522.1 | N-acetylneuraminate epimerase | - |
| N5859_RS19625 (4012804) | 4012804..4013784 | + | 981 | WP_000338801.1 | sialate O-acetylesterase | - |
| N5859_RS19630 (4013792) | 4013792..4014442 | - | 651 | WP_001037977.1 | HNH endonuclease | - |
| N5859_RS19635 (4014579) | 4014579..4014722 | + | 144 | Protein_3840 | HNH endonuclease | - |
| N5859_RS19640 (4015356) | 4015356..4016144 | - | 789 | WP_032161357.1 | helix-turn-helix domain-containing protein | - |
| N5859_RS19645 (4016261) | 4016261..4016536 | - | 276 | WP_001683517.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N5859_RS19650 (4016540) | 4016540..4016788 | - | 249 | WP_024187601.1 | ribbon-helix-helix domain-containing protein | - |
| N5859_RS19655 (4016865) | 4016865..4017698 | - | 834 | WP_032250394.1 | DUF4942 domain-containing protein | - |
| N5859_RS19660 (4017813) | 4017813..4018154 | - | 342 | WP_032161355.1 | TA system toxin CbtA family protein | Toxin Detail |
| N5859_RS19665 (4018185) | 4018185..4018520 | - | 336 | WP_032161354.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| N5859_RS19670 (4018520) | 4018520..4018993 | - | 474 | WP_032161353.1 | DNA repair protein RadC | - |
| N5859_RS19675 (4019023) | 4019023..4019841 | - | 819 | WP_001683514.1 | DUF932 domain-containing protein | - |
| N5859_RS19680 (4020077) | 4020077..4020556 | - | 480 | WP_239594486.1 | hypothetical protein | - |
| N5859_RS19690 (4021349) | 4021349..4021801 | + | 453 | WP_152925145.1 | hypothetical protein | - |
| N5859_RS19695 (4022025) | 4022025..4023005 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| N5859_RS19700 (4023693) | 4023693..4024571 | - | 879 | WP_032161343.1 | HNH endonuclease | - |
| N5859_RS19705 (4024776) | 4024776..4026041 | - | 1266 | WP_032161342.1 | integrase arm-type DNA-binding domain-containing protein | - |
| N5859_RS19715 (4026508) | 4026508..4027527 | + | 1020 | WP_001300770.1 | NADPH-dependent aldehyde reductase Ahr | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|