MGE detailed information
MGE type: Prophage MGE length: 37102 bp
Accession: NZ_CP104613 Location: 417434..454535 Organism: Escherichia coli strain AHM8C212RI Replicon: chromosome
Accession: NZ_CP104613 Location: 417434..454535 Organism: Escherichia coli strain AHM8C212RI Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5856_RS01950 (412545) | 412545..412777 | + | 233 | Protein_372 | IS110 family transposase | - |
| N5856_RS01955 (413110) | 413110..413304 | + | 195 | Protein_373 | transposase | - |
| N5856_RS01960 (413574) | 413574..414356 | - | 783 | WP_205595573.1 | EAL domain-containing protein | - |
| N5856_RS01965 (414417) | 414417..415409 | - | 993 | WP_205595574.1 | nuclease PIN | - |
| N5856_RS01970 (415432) | 415432..415950 | - | 519 | WP_001223371.1 | fimbrial protein | - |
| N5856_RS01975 (416034) | 416034..416543 | - | 510 | WP_284632342.1 | pilus-assembly fibrillin subunit | - |
| N5856_RS01980 (416634) | 416634..417365 | - | 732 | WP_001171049.1 | fimbria/pilus periplasmic chaperone | - |
| N5856_RS01985 (417434) | 417434..419944 | - | 2511 | WP_000739800.1 | Outer membrane usher protein PapC | VF |
| N5856_RS01990 (420065) | 420065..420652 | - | 588 | WP_000498858.1 | PAP fimbrial minor pilin protein | VF |
| N5856_RS01995 (420739) | 420739..421251 | - | 513 | WP_000920488.1 | Pap fimbrial major pilin protein | VF |
| N5856_RS02000 (421296) | 421296..421511 | - | 216 | WP_000021000.1 | PapB/FocB family fimbrial expression transcriptional regulator | - |
| N5856_RS02005 (422006) | 422006..422209 | - | 204 | Protein_383 | IS21 family transposase | - |
| N5856_RS02010 (422219) | 422219..423124 | - | 906 | Protein_384 | IS3 family transposase ISEc31 | Transposase |
| N5856_RS02015 (423112) | 423112..423192 | + | 81 | Protein_385 | hypothetical protein | - |
| N5856_RS02020 (423189) | 423189..424340 | + | 1152 | WP_205595576.1 | IS30 family transposase IS30D | Transposase |
| N5856_RS02025 (424353) | 424353..424655 | - | 303 | Protein_387 | IS3 family transposase ISEc31 | Transposase |
| N5856_RS02030 (424881) | 424881..426043 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| N5856_RS02035 (426123) | 426123..426614 | - | 492 | Protein_389 | IS21 family transposase ISEc10 | Transposase |
| N5856_RS02040 (426922) | 426922..427080 | - | 159 | WP_000831911.1 | hypothetical protein | - |
| N5856_RS02045 (427077) | 427077..427313 | - | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| N5856_RS02050 (427382) | 427382..427957 | - | 576 | WP_205595577.1 | hypothetical protein | - |
| N5856_RS02055 (428204) | 428204..428770 | - | 567 | WP_001126811.1 | inovirus-type Gp2 protein | - |
| N5856_RS02060 (430234) | 430234..431462 | + | 1229 | WP_169005576.1 | IS3 family transposase IS2 | Transposase |
| N5856_RS02065 (431635) | 431635..432339 | + | 705 | WP_001389195.1 | toll/interleukin-1 receptor domain-containing protein | - |
| N5856_RS02070 (432761) | 432761..433492 | - | 732 | WP_250308360.1 | inovirus Gp2 family protein | - |
| N5856_RS02075 (433672) | 433672..433845 | + | 174 | WP_001499034.1 | hypothetical protein | - |
| N5856_RS02080 (435514) | 435514..436368 | + | 855 | WP_000110727.1 | hypothetical protein | - |
| N5856_RS02085 (436365) | 436365..437327 | - | 963 | WP_000126799.1 | hypothetical protein | - |
| N5856_RS02090 (437433) | 437433..438317 | + | 885 | WP_000010383.1 | 50S ribosome-binding GTPase | - |
| N5856_RS02095 (438520) | 438520..439200 | + | 681 | WP_001282921.1 | WYL domain-containing protein | - |
| N5856_RS02100 (439348) | 439348..440025 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| N5856_RS02105 (440031) | 440031..440264 | + | 234 | WP_001278293.1 | DUF905 family protein | - |
| N5856_RS02110 (440354) | 440354..441172 | + | 819 | WP_250308361.1 | DUF932 domain-containing protein | - |
| N5856_RS02120 (442699) | 442699..443178 | + | 480 | WP_250308362.1 | antirestriction protein | - |
| N5856_RS02125 (443193) | 443193..443669 | + | 477 | WP_001186188.1 | RadC family protein | - |
| N5856_RS02130 (443756) | 443756..443977 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| N5856_RS02135 (444057) | 444057..444431 | + | 375 | WP_001285608.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| N5856_RS02140 (444478) | 444478..444855 | + | 378 | WP_000854919.1 | TA system toxin CbtA family protein | Toxin Detail |
| N5856_RS02145 (444852) | 444852..445340 | + | 489 | WP_250308363.1 | DUF5983 family protein | - |
| N5856_RS02150 (445360) | 445360..445557 | + | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| N5856_RS02155 (445642) | 445642..445785 | + | 144 | Protein_413 | hypothetical protein | - |
| N5856_RS02160 (446327) | 446327..447325 | + | 999 | WP_001240356.1 | membrane protein | - |
| N5856_RS02165 (447436) | 447436..448308 | - | 873 | WP_001600928.1 | HNH endonuclease | - |
| N5856_RS02170 (448408) | 448408..448512 | + | 105 | Protein_416 | HNH endonuclease | - |
| N5856_RS02175 (448520) | 448520..449500 | - | 981 | WP_000991444.1 | sialate O-acetylesterase | - |
| N5856_RS02180 (449565) | 449565..450671 | - | 1107 | WP_001298927.1 | N-acetylneuraminate epimerase | - |
| N5856_RS02185 (450691) | 450691..451407 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| N5856_RS02190 (452859) | 452859..453461 | + | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| N5856_RS02195 (453939) | 453939..454535 | + | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| N5856_RS02200 (455016) | 455016..455570 | + | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| N5856_RS02205 (455635) | 455635..456174 | + | 540 | WP_000824114.1 | fimbrial protein | - |
| N5856_RS02210 (456211) | 456211..456936 | + | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|