MGE detailed information
MGE type: Genomic_island MGE length: 10064 bp
Accession: NZ_CP104613 Location: 4033799..4043862 Organism: Escherichia coli strain AHM8C212RI Replicon: chromosome
Accession: NZ_CP104613 Location: 4033799..4043862 Organism: Escherichia coli strain AHM8C212RI Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5856_RS19390 (4029634) | 4029634..4030965 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| N5856_RS19395 (4030987) | 4030987..4031976 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| N5856_RS19400 (4032072) | 4032072..4033010 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| N5856_RS19405 (4033325) | 4033325..4033543 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| N5856_RS19410 (4033799) | 4033799..4034340 | + | 542 | Protein_3795 | protein YhaB | - |
| N5856_RS19415 (4034362) | 4034362..4035549 | + | 1188 | WP_094318196.1 | YhaC family protein | - |
| N5856_RS19425 (4036685) | 4036685..4037830 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| N5856_RS19430 (4037927) | 4037927..4038817 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| N5856_RS19435 (4038847) | 4038847..4039617 | - | 771 | WP_024250085.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| N5856_RS19440 (4039633) | 4039633..4040967 | - | 1335 | WP_097702292.1 | galactarate/glucarate/glycerate transporter GarP | - |
| N5856_RS19445 (4041342) | 4041342..4042913 | + | 1572 | WP_097489939.1 | galactarate dehydratase | - |
| N5856_RS19450 (4043063) | 4043063..4043398 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| N5856_RS19455 (4043398) | 4043398..4043862 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| N5856_RS19460 (4043917) | 4043917..4044726 | - | 810 | WP_000072180.1 | aga operon transcriptional regulator AgaR | - |
| N5856_RS19465 (4044975) | 4044975..4046255 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| N5856_RS19470 (4046278) | 4046278..4046751 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| N5856_RS19475 (4046762) | 4046762..4047541 | + | 780 | WP_033557704.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| N5856_RS19480 (4047531) | 4047531..4048409 | + | 879 | WP_001298758.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| N5856_RS19485 (4048427) | 4048427..4048861 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|