MGE detailed information
MGE type: IS/Tn MGE length: 1329 bp
Accession: NZ_CP104613 Location: 3910202..3911530 Organism: Escherichia coli strain AHM8C212RI Replicon: chromosome
Accession: NZ_CP104613 Location: 3910202..3911530 Organism: Escherichia coli strain AHM8C212RI Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5856_RS18850 (3906010) | 3906010..3906225 | + | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| N5856_RS18855 (3906336) | 3906336..3908081 | + | 1746 | WP_000918827.1 | DNA primase | - |
| N5856_RS18860 (3908276) | 3908276..3910117 | + | 1842 | WP_000437371.1 | RNA polymerase sigma factor RpoD | - |
| N5856_RS18865 (3910202) | 3910202..3911530 | - | 1329 | WP_024250060.1 | IS4 family transposase IS4 | Transposase |
| N5856_RS18870 (3911635) | 3911635..3912141 | - | 507 | WP_000228930.1 | G/U mismatch-specific DNA glycosylase | - |
| N5856_RS18880 (3912428) | 3912428..3913273 | - | 846 | WP_001280435.1 | DUF4942 domain-containing protein | - |
| N5856_RS18885 (3913370) | 3913370..3913567 | - | 198 | WP_094770706.1 | DUF957 domain-containing protein | - |
| N5856_RS18890 (3913643) | 3913643..3913792 | - | 150 | Protein_3691 | DUF5983 family protein | - |
| N5856_RS18895 (3913789) | 3913789..3914166 | - | 378 | WP_072644276.1 | TA system toxin CbtA family protein | Toxin Detail |
| N5856_RS18900 (3914212) | 3914212..3914586 | - | 375 | WP_072648994.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| N5856_RS18905 (3914665) | 3914665..3914886 | - | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| N5856_RS18910 (3914955) | 3914955..3915431 | - | 477 | WP_071045793.1 | RadC family protein | - |
| N5856_RS18915 (3915447) | 3915447..3915932 | - | 486 | WP_072815258.1 | antirestriction protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|