MGE detailed information
MGE type: Genomic_island MGE length: 65146 bp
Accession: NZ_CP104595 Location: 785783..850928 Organism: Escherichia coli strain EC9952 Replicon: chromosome
Accession: NZ_CP104595 Location: 785783..850928 Organism: Escherichia coli strain EC9952 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5B57_RS03760 (781148) | 781148..781711 | + | 564 | WP_001115154.1 | type II secretion system minor pseudopilin GspH | - |
| N5B57_RS03765 (781708) | 781708..782079 | + | 372 | WP_000820104.1 | type II secretion system minor pseudopilin GspI | - |
| N5B57_RS03770 (782076) | 782076..782675 | + | 600 | WP_001255040.1 | type II secretion system minor pseudopilin GspJ | - |
| N5B57_RS03775 (782678) | 782678..783655 | + | 978 | WP_000633220.1 | type II secretion system minor pseudopilin GspK | - |
| N5B57_RS03780 (783652) | 783652..784830 | + | 1179 | WP_000094971.1 | type II secretion system protein GspL | - |
| N5B57_RS03785 (784832) | 784832..785368 | + | 537 | WP_000942786.1 | GspM family type II secretion system protein YghD | - |
| N5B57_RS03790 (785783) | 785783..786109 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N5B57_RS03795 (786106) | 786106..786369 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| N5B57_RS03800 (786441) | 786441..787307 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| N5B57_RS03805 (787392) | 787392..787589 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| N5B57_RS03810 (787601) | 787601..788092 | - | 492 | WP_023155722.1 | DUF5983 family protein | - |
| N5B57_RS03815 (788089) | 788089..788466 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| N5B57_RS03820 (788513) | 788513..788887 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| N5B57_RS03825 (788967) | 788967..789188 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| N5B57_RS03830 (789257) | 789257..789733 | - | 477 | WP_001186715.1 | RadC family protein | - |
| N5B57_RS03835 (789749) | 789749..790234 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| N5B57_RS03840 (790326) | 790326..791144 | - | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| N5B57_RS03845 (791235) | 791235..791444 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| N5B57_RS03850 (791474) | 791474..792151 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| N5B57_RS03855 (792270) | 792270..793154 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| N5B57_RS03860 (793261) | 793261..794193 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| N5B57_RS03865 (794190) | 794190..794999 | - | 810 | WP_032153709.1 | hypothetical protein | - |
| N5B57_RS03870 (796744) | 796744..797475 | + | 732 | WP_001683563.1 | inovirus Gp2 family protein | - |
| N5B57_RS03875 (797500) | 797500..797649 | + | 150 | WP_012139169.1 | hypothetical protein | - |
| N5B57_RS03880 (797836) | 797836..798396 | + | 561 | WP_045171867.1 | hypothetical protein | - |
| N5B57_RS03885 (798465) | 798465..798698 | + | 234 | WP_000958494.1 | AlpA family transcriptional regulator | - |
| N5B57_RS03890 (798695) | 798695..798820 | + | 126 | WP_001683561.1 | hypothetical protein | - |
| N5B57_RS03895 (798939) | 798939..799487 | + | 549 | WP_272471688.1 | hypothetical protein | - |
| N5B57_RS03900 (799506) | 799506..799754 | - | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| N5B57_RS03905 (799823) | 799823..800014 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| N5B57_RS03910 (800417) | 800417..801108 | - | 692 | Protein_767 | IS1 family transposase | - |
| N5B57_RS03915 (801168) | 801168..801344 | + | 177 | Protein_768 | transketolase family protein | - |
| N5B57_RS03920 (801533) | 801533..801708 | + | 176 | Protein_769 | transposase | - |
| N5B57_RS03925 (802571) | 802571..803137 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| N5B57_RS03930 (803378) | 803378..804193 | + | 816 | WP_001043260.1 | Holliday junction ATP-dependent DNA helicase RuvA | ARG |
| N5B57_RS03935 (804254) | 804254..805057 | + | 804 | WP_001082319.1 | Crossover junction endodeoxyribonuclease RuvC | ARG |
| N5B57_RS03940 (805057) | 805057..805893 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| N5B57_RS03945 (806199) | 806199..806441 | + | 243 | WP_000844627.1 | transposase | - |
| N5B57_RS03950 (806473) | 806473..807123 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| N5B57_RS03955 (807229) | 807229..808428 | + | 1200 | WP_032153701.1 | hypothetical protein | ARG |
| N5B57_RS03960 (808395) | 808395..808583 | - | 189 | Protein_777 | IS91 family transposase | - |
| N5B57_RS03965 (808695) | 808695..809000 | - | 306 | WP_001255015.1 | hypothetical protein | VF |
| N5B57_RS03970 (809028) | 809028..810242 | - | 1215 | WP_023300759.1 | hypothetical protein | ARG |
| N5B57_RS03975 (810459) | 810459..811343 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| N5B57_RS03980 (811374) | 811374..812030 | - | 657 | Protein_781 | IS91-like element ISVsa3 family transposase | - |
| N5B57_RS03985 (811964) | 811964..812242 | - | 279 | WP_001349530.1 | hypothetical protein | VF |
| N5B57_RS03990 (812665) | 812665..812979 | + | 315 | WP_000930062.1 | 1-deoxy-D-xylulose-5-phosphate synthase | VF |
| N5B57_RS03995 (813186) | 813186..813449 | + | 264 | Protein_784 | D-erythrose-4-phosphate dehydrogenase | VF |
| N5B57_RS04000 (813900) | 813900..815132 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| N5B57_RS04005 (815283) | 815283..816444 | - | 1162 | Protein_786 | IS3 family transposase IS3 | Transposase |
| N5B57_RS04010 (816612) | 816612..817592 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| N5B57_RS04015 (817589) | 817589..818533 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| N5B57_RS04020 (818536) | 818536..819618 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| N5B57_RS04025 (820085) | 820085..820351 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| N5B57_RS04030 (820651) | 820651..821165 | - | 515 | Protein_791 | ISL3 family transposase ISEc38 | Transposase |
| N5B57_RS04035 (821773) | 821773..825186 | + | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| N5B57_RS04040 (825250) | 825250..826884 | + | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| N5B57_RS04045 (826881) | 826881..828023 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| N5B57_RS04050 (828032) | 828032..829654 | + | 1623 | WP_000778955.1 | AAA family ATPase | - |
| N5B57_RS04055 (829654) | 829654..830550 | + | 897 | WP_000499115.1 | hypothetical protein | - |
| N5B57_RS04060 (830773) | 830773..830951 | - | 179 | Protein_797 | integrase | - |
| N5B57_RS04065 (831181) | 831181..831918 | + | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| N5B57_RS04070 (832338) | 832338..833234 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| N5B57_RS04075 (833283) | 833283..834362 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| N5B57_RS04080 (834409) | 834409..835980 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| N5B57_RS04085 (835977) | 835977..836243 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| N5B57_RS04090 (836383) | 836383..836580 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| N5B57_RS04095 (836633) | 836633..838306 | + | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| N5B57_RS04100 (838450) | 838450..839484 | - | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| N5B57_RS04105 (839534) | 839534..839809 | + | 276 | WP_023181049.1 | IS1 family transposase IS1A | Transposase |
| N5B57_RS04110 (839869) | 839869..840021 | + | 153 | Protein_807 | IS3 family transposase | - |
| N5B57_RS04115 (840106) | 840106..840852 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| N5B57_RS04120 (840867) | 840867..842408 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| N5B57_RS04125 (842601) | 842601..842759 | + | 159 | Protein_810 | integrase core domain-containing protein | - |
| N5B57_RS04130 (843337) | 843337..844731 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| N5B57_RS04135 (844926) | 844926..846356 | - | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| N5B57_RS04140 (846356) | 846356..847633 | - | 1278 | WP_001083368.1 | MFS transporter | - |
| N5B57_RS04145 (847696) | 847696..849822 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| N5B57_RS04150 (849918) | 849918..850928 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| N5B57_RS04155 (851078) | 851078..852262 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| N5B57_RS04165 (852620) | 852620..853327 | - | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| N5B57_RS04170 (853480) | 853480..853563 | + | 84 | WP_211180506.1 | protein YqgH | - |
| N5B57_RS04175 (853725) | 853725..855860 | + | 2136 | WP_000839757.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|