MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 88844 bp
Accession: NZ_CP104590 Location: 2393098..2481941 Organism: Pseudomonas aeruginosa strain WTJH36 Replicon: chromosome
Accession: NZ_CP104590 Location: 2393098..2481941 Organism: Pseudomonas aeruginosa strain WTJH36 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5878_RS11235 (N5878_11235) | 2388586..2389197 | - | 612 | WP_004348355.1 | fimbrial protein | - |
| N5878_RS11240 (N5878_11240) | 2389641..2390018 | - | 378 | WP_003117019.1 | Hpt domain-containing protein | - |
| N5878_RS11245 (N5878_11245) | 2390603..2391241 | + | 639 | WP_003120654.1 | NUDIX hydrolase | - |
| N5878_RS11250 (N5878_11250) | 2391626..2392186 | + | 561 | WP_003117022.1 | hypothetical protein | - |
| N5878_RS11255 (N5878_11255) | 2392307..2392711 | - | 405 | WP_003112559.1 | thioesterase family protein | - |
| N5878_RS11265 (N5878_11265) | 2393235..2394101 | + | 867 | WP_003111785.1 | ParA family protein | - |
| N5878_RS11270 (N5878_11270) | 2394103..2394840 | + | 738 | WP_023083208.1 | hypothetical protein | - |
| N5878_RS11275 (N5878_11275) | 2394837..2395334 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| N5878_RS11280 (N5878_11280) | 2395331..2396482 | + | 1152 | WP_023083209.1 | Lar family restriction alleviation protein | - |
| N5878_RS11285 (N5878_11285) | 2396482..2397183 | + | 702 | WP_023083210.1 | DUF2786 domain-containing protein | - |
| N5878_RS11290 (N5878_11290) | 2397180..2397887 | + | 708 | WP_023083211.1 | HNH endonuclease signature motif containing protein | - |
| N5878_RS11295 (N5878_11295) | 2397871..2398095 | + | 225 | WP_003134074.1 | hypothetical protein | - |
| N5878_RS11300 (N5878_11300) | 2398092..2399435 | + | 1344 | WP_023083212.1 | replicative DNA helicase | - |
| N5878_RS11305 (N5878_11305) | 2399874..2400320 | - | 447 | WP_031631896.1 | hypothetical protein | - |
| N5878_RS11310 (N5878_11310) | 2400498..2400683 | + | 186 | WP_023083214.1 | hypothetical protein | - |
| N5878_RS11315 (N5878_11315) | 2400673..2401200 | + | 528 | WP_004352849.1 | hypothetical protein | - |
| N5878_RS11320 (N5878_11320) | 2401197..2401454 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| N5878_RS11325 (N5878_11325) | 2401447..2401689 | + | 243 | WP_023083215.1 | hypothetical protein | - |
| N5878_RS11330 (N5878_11330) | 2401682..2401915 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| N5878_RS11335 (N5878_11335) | 2401915..2402931 | + | 1017 | WP_004352847.1 | nucleoid-associated protein YejK | - |
| N5878_RS11340 (N5878_11340) | 2402934..2403188 | + | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| N5878_RS11345 (N5878_11345) | 2403185..2404921 | + | 1737 | WP_004352845.1 | ParB family protein | - |
| N5878_RS11350 (N5878_11350) | 2404949..2405716 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| N5878_RS11355 (N5878_11355) | 2405713..2406984 | + | 1272 | WP_023083217.1 | STY4528 family pathogenicity island replication protein | - |
| N5878_RS11360 (N5878_11360) | 2406981..2407778 | + | 798 | WP_235597565.1 | hypothetical protein | - |
| N5878_RS11365 (N5878_11365) | 2407935..2408663 | + | 729 | WP_004352842.1 | TIGR03761 family integrating conjugative element protein | - |
| N5878_RS11370 (N5878_11370) | 2408669..2409217 | + | 549 | WP_004352841.1 | DUF3158 family protein | - |
| N5878_RS11375 (N5878_11375) | 2409264..2410103 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| N5878_RS11380 (N5878_11380) | 2410133..2410621 | + | 489 | WP_004352840.1 | single-stranded DNA-binding protein | - |
| N5878_RS11385 (N5878_11385) | 2410777..2410944 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| N5878_RS11390 (N5878_11390) | 2411010..2411228 | - | 219 | WP_023083218.1 | hypothetical protein | - |
| N5878_RS11395 (N5878_11395) | 2411242..2411439 | - | 198 | WP_023083219.1 | hypothetical protein | - |
| N5878_RS11400 (N5878_11400) | 2411455..2411865 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| N5878_RS11405 (N5878_11405) | 2411865..2412095 | - | 231 | WP_031634724.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N5878_RS11410 (N5878_11410) | 2412351..2414270 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| N5878_RS11415 (N5878_11415) | 2414578..2414787 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| N5878_RS11420 (N5878_11420) | 2415008..2416897 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| N5878_RS11425 (N5878_11425) | 2416894..2418867 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| N5878_RS11430 (N5878_11430) | 2418989..2419771 | + | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| N5878_RS11435 (N5878_11435) | 2419804..2421057 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| N5878_RS11440 (N5878_11440) | 2421231..2422355 | + | 1125 | WP_260886777.1 | hypothetical protein | VF |
| N5878_RS11445 (N5878_11445) | 2422355..2424064 | + | 1710 | WP_004352834.1 | hypothetical protein | VF |
| N5878_RS11450 (N5878_11450) | 2424068..2425393 | + | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| N5878_RS11455 (N5878_11455) | 2425383..2425916 | + | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| N5878_RS11460 (N5878_11460) | 2425925..2427505 | + | 1581 | WP_003123334.1 | hypothetical protein | VF |
| N5878_RS11465 (N5878_11465) | 2427505..2428584 | + | 1080 | WP_003123335.1 | hypothetical protein | VF |
| N5878_RS11470 (N5878_11470) | 2428606..2429136 | + | 531 | WP_004352827.1 | hypothetical protein | VF |
| N5878_RS11475 (N5878_11475) | 2429133..2430074 | + | 942 | WP_004352826.1 | ATPase, T2SS/T4P/T4SS family | - |
| N5878_RS11480 (N5878_11480) | 2430079..2431407 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| N5878_RS11485 (N5878_11485) | 2431436..2431873 | + | 438 | WP_004352822.1 | Putative sialic acid transporter | VF |
| N5878_RS11490 (N5878_11490) | 2432795..2433184 | + | 390 | WP_004352820.1 | hypothetical protein | - |
| N5878_RS11495 (N5878_11495) | 2433259..2433435 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| N5878_RS11500 (N5878_11500) | 2433437..2433571 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| N5878_RS11505 (N5878_11505) | 2433896..2434375 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| N5878_RS11510 (N5878_11510) | 2434513..2434671 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| N5878_RS11515 (N5878_11515) | 2434745..2434942 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| N5878_RS11520 (N5878_11520) | 2435047..2435325 | + | 279 | WP_004352810.1 | hypothetical protein | - |
| N5878_RS11525 (N5878_11525) | 2435427..2436134 | + | 708 | WP_004352808.1 | hypothetical protein | - |
| N5878_RS11530 (N5878_11530) | 2436370..2436720 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| N5878_RS11535 (N5878_11535) | 2436777..2437388 | + | 612 | Protein_2291 | DUF3275 family protein | - |
| N5878_RS11540 (N5878_11540) | 2437671..2438033 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| N5878_RS11545 (N5878_11545) | 2438101..2438355 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| N5878_RS11550 (N5878_11550) | 2438448..2439053 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| N5878_RS11555 (N5878_11555) | 2439083..2440528 | + | 1446 | WP_003125297.1 | DUF6094 domain-containing protein | - |
| N5878_RS11560 (N5878_11560) | 2440633..2442882 | + | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| N5878_RS11565 (N5878_11565) | 2442907..2443290 | - | 384 | WP_123789178.1 | hypothetical protein | - |
| N5878_RS11570 (N5878_11570) | 2443496..2443789 | + | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| N5878_RS11575 (N5878_11575) | 2443786..2444652 | + | 867 | WP_004352797.1 | IS3 family transposase ISAeca4 | Transposase |
| N5878_RS11580 (N5878_11580) | 2444912..2445604 | + | 693 | WP_004352794.1 | hypothetical protein | - |
| N5878_RS11585 (N5878_11585) | 2445615..2446370 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| N5878_RS11590 (N5878_11590) | 2446355..2446936 | + | 582 | WP_003123352.1 | Transcriptional regulator SlyA | VF |
| N5878_RS11595 (N5878_11595) | 2446933..2447433 | + | 501 | WP_004352788.1 | integrating conjugative element protein | - |
| N5878_RS11600 (N5878_11600) | 2447442..2447711 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| N5878_RS11605 (N5878_11605) | 2447715..2449946 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| N5878_RS11610 (N5878_11610) | 2449946..2450692 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| N5878_RS11615 (N5878_11615) | 2450710..2451201 | + | 492 | WP_031631905.1 | hypothetical protein | - |
| N5878_RS11620 (N5878_11620) | 2451442..2452923 | + | 1482 | WP_023083224.1 | UvrD-helicase domain-containing protein | - |
| N5878_RS11625 (N5878_11625) | 2453055..2454164 | + | 1110 | WP_023083225.1 | hypothetical protein | - |
| N5878_RS11630 (N5878_11630) | 2454209..2454475 | - | 267 | WP_223195009.1 | DUF2845 domain-containing protein | - |
| N5878_RS11635 (N5878_11635) | 2454693..2454992 | + | 300 | WP_023083774.1 | hypothetical protein | - |
| N5878_RS11640 (N5878_11640) | 2455085..2455423 | + | 339 | WP_023083775.1 | RAQPRD family integrative conjugative element protein | - |
| N5878_RS11645 (N5878_11645) | 2455420..2455659 | + | 240 | WP_003123360.1 | TIGR03758 family integrating conjugative element protein | - |
| N5878_RS11650 (N5878_11650) | 2455677..2456033 | + | 357 | WP_023083777.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| N5878_RS11655 (N5878_11655) | 2456044..2456430 | + | 387 | WP_017001410.1 | TIGR03750 family conjugal transfer protein | - |
| N5878_RS11660 (N5878_11660) | 2456427..2457086 | + | 660 | WP_023083778.1 | TIGR03746 family integrating conjugative element protein | - |
| N5878_RS11665 (N5878_11665) | 2457083..2457967 | + | 885 | WP_023083779.1 | TIGR03749 family integrating conjugative element protein | - |
| N5878_RS11670 (N5878_11670) | 2457951..2459456 | + | 1506 | WP_023083780.1 | TIGR03752 family integrating conjugative element protein | - |
| N5878_RS11675 (N5878_11675) | 2459434..2459877 | + | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| N5878_RS11680 (N5878_11680) | 2459877..2462819 | + | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| N5878_RS11685 (N5878_11685) | 2462816..2463100 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| N5878_RS11690 (N5878_11690) | 2463097..2463756 | + | 660 | WP_019484424.1 | DsbA family protein | - |
| N5878_RS11695 (N5878_11695) | 2463753..2463971 | - | 219 | WP_019484423.1 | hypothetical protein | - |
| N5878_RS11700 (N5878_11700) | 2464787..2465416 | - | 630 | WP_171902868.1 | hypothetical protein | - |
| N5878_RS11705 (N5878_11705) | 2466112..2466543 | + | 432 | WP_023083783.1 | TIGR03757 family integrating conjugative element protein | - |
| N5878_RS11710 (N5878_11710) | 2466543..2467481 | + | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| N5878_RS11715 (N5878_11715) | 2467499..2468881 | + | 1383 | WP_023083784.1 | integrating conjugative element protein | - |
| N5878_RS11720 (N5878_11720) | 2468881..2469228 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| N5878_RS11725 (N5878_11725) | 2469225..2470739 | + | 1515 | WP_023083785.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| N5878_RS11730 (N5878_11730) | 2470796..2471134 | - | 339 | WP_023083786.1 | hypothetical protein | - |
| N5878_RS11735 (N5878_11735) | 2471253..2471525 | + | 273 | WP_023083787.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| N5878_RS11740 (N5878_11740) | 2471529..2471879 | + | 351 | WP_023083788.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N5878_RS11745 (N5878_11745) | 2472290..2474749 | - | 2460 | WP_023083789.1 | ATP-binding protein | - |
| N5878_RS11750 (N5878_11750) | 2475037..2476764 | - | 1728 | WP_023083790.1 | ATP-binding protein | - |
| N5878_RS11755 (N5878_11755) | 2476775..2477788 | - | 1014 | WP_023083791.1 | SIR2 family protein | - |
| N5878_RS11760 (N5878_11760) | 2478330..2480249 | + | 1920 | WP_023083792.1 | MobH family relaxase | - |
| N5878_RS11765 (N5878_11765) | 2480246..2481526 | + | 1281 | WP_023083793.1 | hypothetical protein ; Integrase | Integrase |
| N5878_RS11775 (N5878_11775) | 2482032..2482706 | - | 675 | WP_003111415.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| N5878_RS11780 (N5878_11780) | 2482722..2483369 | - | 648 | WP_003112571.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| N5878_RS11785 (N5878_11785) | 2483589..2484413 | - | 825 | WP_003120698.1 | tol-pal system protein YbgF | - |
| N5878_RS11790 (N5878_11790) | 2484423..2484929 | - | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| N5878_RS11795 (N5878_11795) | 2484982..2486280 | - | 1299 | WP_003086128.1 | Tol-Pal system beta propeller repeat protein TolB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|