MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 88844 bp
Accession: NZ_CP104588 Location: 5586826..5675669 Organism: Pseudomonas aeruginosa strain WTJH32 Replicon: chromosome
Accession: NZ_CP104588 Location: 5586826..5675669 Organism: Pseudomonas aeruginosa strain WTJH32 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5879_RS25980 (N5879_25980) | 5582398..5586597 | + | 4200 | WP_023083207.1 | two-partner secretion system exoprotein TpsA4 | - |
| N5879_RS25990 (N5879_25990) | 5586963..5587829 | + | 867 | WP_003111785.1 | ParA family protein | - |
| N5879_RS25995 (N5879_25995) | 5587831..5588568 | + | 738 | WP_023083208.1 | hypothetical protein | - |
| N5879_RS26000 (N5879_26000) | 5588565..5589062 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| N5879_RS26005 (N5879_26005) | 5589059..5590210 | + | 1152 | WP_023083209.1 | Lar family restriction alleviation protein | - |
| N5879_RS26010 (N5879_26010) | 5590210..5590911 | + | 702 | WP_023083210.1 | DUF2786 domain-containing protein | - |
| N5879_RS26015 (N5879_26015) | 5590908..5591615 | + | 708 | WP_023083211.1 | HNH endonuclease signature motif containing protein | - |
| N5879_RS26020 (N5879_26020) | 5591599..5591823 | + | 225 | WP_003134074.1 | hypothetical protein | - |
| N5879_RS26025 (N5879_26025) | 5591820..5593163 | + | 1344 | WP_023083212.1 | replicative DNA helicase | - |
| N5879_RS26030 (N5879_26030) | 5593602..5594048 | - | 447 | WP_031631896.1 | hypothetical protein | - |
| N5879_RS26035 (N5879_26035) | 5594226..5594411 | + | 186 | WP_023083214.1 | hypothetical protein | - |
| N5879_RS26040 (N5879_26040) | 5594401..5594928 | + | 528 | WP_004352849.1 | hypothetical protein | - |
| N5879_RS26045 (N5879_26045) | 5594925..5595182 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| N5879_RS26050 (N5879_26050) | 5595175..5595417 | + | 243 | WP_023083215.1 | hypothetical protein | - |
| N5879_RS26055 (N5879_26055) | 5595410..5595643 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| N5879_RS26060 (N5879_26060) | 5595643..5596659 | + | 1017 | WP_004352847.1 | nucleoid-associated protein YejK | - |
| N5879_RS26065 (N5879_26065) | 5596662..5596916 | + | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| N5879_RS26070 (N5879_26070) | 5596913..5598649 | + | 1737 | WP_004352845.1 | ParB family protein | - |
| N5879_RS26075 (N5879_26075) | 5598677..5599444 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| N5879_RS26080 (N5879_26080) | 5599441..5600712 | + | 1272 | WP_023083217.1 | STY4528 family pathogenicity island replication protein | - |
| N5879_RS26085 (N5879_26085) | 5600709..5601506 | + | 798 | WP_235597565.1 | hypothetical protein | - |
| N5879_RS26090 (N5879_26090) | 5601663..5602391 | + | 729 | WP_004352842.1 | TIGR03761 family integrating conjugative element protein | - |
| N5879_RS26095 (N5879_26095) | 5602397..5602945 | + | 549 | WP_004352841.1 | DUF3158 family protein | - |
| N5879_RS26100 (N5879_26100) | 5602992..5603831 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| N5879_RS26105 (N5879_26105) | 5603861..5604349 | + | 489 | WP_004352840.1 | single-stranded DNA-binding protein | - |
| N5879_RS26110 (N5879_26110) | 5604505..5604672 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| N5879_RS26115 (N5879_26115) | 5604738..5604956 | - | 219 | WP_023083218.1 | hypothetical protein | - |
| N5879_RS26120 (N5879_26120) | 5604970..5605167 | - | 198 | WP_023083219.1 | hypothetical protein | - |
| N5879_RS26125 (N5879_26125) | 5605183..5605593 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| N5879_RS26130 (N5879_26130) | 5605593..5605823 | - | 231 | WP_031634724.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N5879_RS26135 (N5879_26135) | 5606079..5607998 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| N5879_RS26140 (N5879_26140) | 5608306..5608515 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| N5879_RS26145 (N5879_26145) | 5608736..5610625 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| N5879_RS26150 (N5879_26150) | 5610622..5612595 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| N5879_RS26155 (N5879_26155) | 5612717..5613499 | + | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| N5879_RS26160 (N5879_26160) | 5613532..5614785 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| N5879_RS26165 (N5879_26165) | 5614959..5616083 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| N5879_RS26170 (N5879_26170) | 5616083..5617792 | + | 1710 | WP_004352834.1 | hypothetical protein | VF |
| N5879_RS26175 (N5879_26175) | 5617796..5619121 | + | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| N5879_RS26180 (N5879_26180) | 5619111..5619644 | + | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| N5879_RS26185 (N5879_26185) | 5619653..5621233 | + | 1581 | WP_003123334.1 | hypothetical protein | VF |
| N5879_RS26190 (N5879_26190) | 5621233..5622312 | + | 1080 | WP_003123335.1 | hypothetical protein | VF |
| N5879_RS26195 (N5879_26195) | 5622334..5622864 | + | 531 | WP_004352827.1 | hypothetical protein | VF |
| N5879_RS26200 (N5879_26200) | 5622861..5623802 | + | 942 | WP_004352826.1 | ATPase, T2SS/T4P/T4SS family | - |
| N5879_RS26205 (N5879_26205) | 5623807..5625135 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| N5879_RS26210 (N5879_26210) | 5625164..5625601 | + | 438 | WP_004352822.1 | hypothetical protein | VF |
| N5879_RS26215 (N5879_26215) | 5626523..5626912 | + | 390 | WP_004352820.1 | hypothetical protein | - |
| N5879_RS26220 (N5879_26220) | 5626987..5627163 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| N5879_RS26225 (N5879_26225) | 5627165..5627299 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| N5879_RS26230 (N5879_26230) | 5627624..5628103 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| N5879_RS26235 (N5879_26235) | 5628241..5628399 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| N5879_RS26240 (N5879_26240) | 5628473..5628670 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| N5879_RS26245 (N5879_26245) | 5629155..5629862 | + | 708 | WP_004352808.1 | hypothetical protein | - |
| N5879_RS26250 (N5879_26250) | 5630098..5630448 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| N5879_RS26255 (N5879_26255) | 5630505..5631116 | + | 612 | Protein_5194 | DUF3275 family protein | - |
| N5879_RS26260 (N5879_26260) | 5631399..5631761 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| N5879_RS26265 (N5879_26265) | 5631829..5632083 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| N5879_RS26270 (N5879_26270) | 5632176..5632781 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| N5879_RS26275 (N5879_26275) | 5632811..5634256 | + | 1446 | WP_003125297.1 | DUF6094 domain-containing protein | - |
| N5879_RS26280 (N5879_26280) | 5634361..5636610 | + | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| N5879_RS26285 (N5879_26285) | 5636635..5637018 | - | 384 | WP_123789178.1 | hypothetical protein | - |
| N5879_RS26290 (N5879_26290) | 5637224..5637517 | + | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| N5879_RS26295 (N5879_26295) | 5637514..5638380 | + | 867 | WP_004352797.1 | IS3 family transposase ISPosp5 | Transposase |
| N5879_RS26300 (N5879_26300) | 5638640..5639332 | + | 693 | WP_004352794.1 | hypothetical protein | - |
| N5879_RS26305 (N5879_26305) | 5639343..5640098 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| N5879_RS26310 (N5879_26310) | 5640083..5640664 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| N5879_RS26315 (N5879_26315) | 5640661..5641161 | + | 501 | WP_004352788.1 | integrating conjugative element protein | - |
| N5879_RS26320 (N5879_26320) | 5641170..5641439 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| N5879_RS26325 (N5879_26325) | 5641443..5643674 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| N5879_RS26330 (N5879_26330) | 5643674..5644420 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| N5879_RS26335 (N5879_26335) | 5644438..5644929 | + | 492 | WP_031631905.1 | hypothetical protein | - |
| N5879_RS26340 (N5879_26340) | 5645170..5646651 | + | 1482 | WP_023083224.1 | UvrD-helicase domain-containing protein | - |
| N5879_RS26345 (N5879_26345) | 5646783..5647892 | + | 1110 | WP_023083225.1 | hypothetical protein | - |
| N5879_RS26350 (N5879_26350) | 5647937..5648203 | - | 267 | WP_223195009.1 | DUF2845 domain-containing protein | - |
| N5879_RS26355 (N5879_26355) | 5648421..5648720 | + | 300 | WP_023083774.1 | hypothetical protein | - |
| N5879_RS26360 (N5879_26360) | 5648813..5649151 | + | 339 | WP_023083775.1 | RAQPRD family integrative conjugative element protein | - |
| N5879_RS26365 (N5879_26365) | 5649148..5649387 | + | 240 | WP_003123360.1 | TIGR03758 family integrating conjugative element protein | - |
| N5879_RS26370 (N5879_26370) | 5649405..5649761 | + | 357 | WP_023083777.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| N5879_RS26375 (N5879_26375) | 5649772..5650158 | + | 387 | WP_017001410.1 | TIGR03750 family conjugal transfer protein | - |
| N5879_RS26380 (N5879_26380) | 5650155..5650814 | + | 660 | WP_023083778.1 | TIGR03746 family integrating conjugative element protein | - |
| N5879_RS26385 (N5879_26385) | 5650811..5651695 | + | 885 | WP_023083779.1 | TIGR03749 family integrating conjugative element protein | - |
| N5879_RS26390 (N5879_26390) | 5651679..5653184 | + | 1506 | WP_023083780.1 | TIGR03752 family integrating conjugative element protein | - |
| N5879_RS26395 (N5879_26395) | 5653162..5653605 | + | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| N5879_RS26400 (N5879_26400) | 5653605..5656547 | + | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| N5879_RS26405 (N5879_26405) | 5656544..5656828 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| N5879_RS26410 (N5879_26410) | 5656825..5657484 | + | 660 | WP_019484424.1 | DsbA family protein | - |
| N5879_RS26415 (N5879_26415) | 5657481..5657699 | - | 219 | WP_019484423.1 | hypothetical protein | - |
| N5879_RS26420 (N5879_26420) | 5659840..5660271 | + | 432 | WP_023083783.1 | TIGR03757 family integrating conjugative element protein | - |
| N5879_RS26425 (N5879_26425) | 5660271..5661209 | + | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| N5879_RS26430 (N5879_26430) | 5661227..5662609 | + | 1383 | WP_023083784.1 | integrating conjugative element protein | - |
| N5879_RS26435 (N5879_26435) | 5662609..5662956 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| N5879_RS26440 (N5879_26440) | 5662953..5664467 | + | 1515 | WP_023083785.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| N5879_RS26445 (N5879_26445) | 5664524..5664862 | - | 339 | WP_023083786.1 | hypothetical protein | - |
| N5879_RS26450 (N5879_26450) | 5664981..5665253 | + | 273 | WP_023083787.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| N5879_RS26455 (N5879_26455) | 5665257..5665607 | + | 351 | WP_023083788.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N5879_RS26460 (N5879_26460) | 5666018..5668477 | - | 2460 | WP_023083789.1 | ATP-binding protein | - |
| N5879_RS26465 (N5879_26465) | 5668765..5670492 | - | 1728 | WP_023083790.1 | ATP-binding protein | - |
| N5879_RS26470 (N5879_26470) | 5670503..5671516 | - | 1014 | WP_023083791.1 | SIR2 family protein | - |
| N5879_RS26475 (N5879_26475) | 5672058..5673977 | + | 1920 | WP_023083792.1 | MobH family relaxase | - |
| N5879_RS26480 (N5879_26480) | 5673974..5675254 | + | 1281 | WP_023083793.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| N5879_RS26500 (N5879_26500) | 5676107..5678671 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| N5879_RS26505 (N5879_26505) | 5678827..5679555 | - | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| N5879_RS26510 (N5879_26510) | 5679552..5680514 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|