MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 87668 bp
Accession: NZ_CP104586 Location: 4371293..4458960 Organism: Pseudomonas aeruginosa strain WTJH6 Replicon: chromosome
Accession: NZ_CP104586 Location: 4371293..4458960 Organism: Pseudomonas aeruginosa strain WTJH6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5877_RS20140 (N5877_20140) | 4366448..4367410 | + | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| N5877_RS20145 (N5877_20145) | 4367407..4368135 | + | 729 | WP_003119426.1 | peptidoglycan editing factor PgeF | - |
| N5877_RS20150 (N5877_20150) | 4368291..4370855 | + | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| N5877_RS20170 (N5877_20170) | 4371708..4372988 | - | 1281 | WP_023083793.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| N5877_RS20175 (N5877_20175) | 4372985..4374904 | - | 1920 | WP_023083792.1 | MobH family relaxase | - |
| N5877_RS20180 (N5877_20180) | 4375446..4376459 | + | 1014 | WP_023083791.1 | SIR2 family protein | - |
| N5877_RS20185 (N5877_20185) | 4376470..4378197 | + | 1728 | WP_023083790.1 | ATP-binding protein | - |
| N5877_RS20190 (N5877_20190) | 4378485..4380944 | + | 2460 | WP_023083789.1 | ATP-binding protein | - |
| N5877_RS20195 (N5877_20195) | 4381355..4381705 | - | 351 | WP_023083788.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N5877_RS20200 (N5877_20200) | 4381709..4381981 | - | 273 | WP_023083787.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| N5877_RS20205 (N5877_20205) | 4382100..4382438 | + | 339 | WP_023083786.1 | hypothetical protein | - |
| N5877_RS20210 (N5877_20210) | 4382495..4384009 | - | 1515 | WP_023083785.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| N5877_RS20215 (N5877_20215) | 4384006..4384353 | - | 348 | WP_016851629.1 | hypothetical protein | - |
| N5877_RS20220 (N5877_20220) | 4384353..4385735 | - | 1383 | WP_023083784.1 | integrating conjugative element protein | - |
| N5877_RS20225 (N5877_20225) | 4385753..4386691 | - | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| N5877_RS20230 (N5877_20230) | 4386691..4387122 | - | 432 | WP_023083783.1 | TIGR03757 family integrating conjugative element protein | - |
| N5877_RS20235 (N5877_20235) | 4387818..4388447 | + | 630 | WP_171902868.1 | hypothetical protein | - |
| N5877_RS20240 (N5877_20240) | 4389263..4389481 | + | 219 | WP_019484423.1 | hypothetical protein | - |
| N5877_RS20245 (N5877_20245) | 4389478..4390137 | - | 660 | WP_019484424.1 | DsbA family protein | - |
| N5877_RS20250 (N5877_20250) | 4390134..4390418 | - | 285 | WP_003086159.1 | hypothetical protein | - |
| N5877_RS20255 (N5877_20255) | 4390415..4393357 | - | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| N5877_RS20260 (N5877_20260) | 4393357..4393800 | - | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| N5877_RS20265 (N5877_20265) | 4393778..4395283 | - | 1506 | WP_023083780.1 | TIGR03752 family integrating conjugative element protein | - |
| N5877_RS20270 (N5877_20270) | 4395267..4396151 | - | 885 | WP_023083779.1 | TIGR03749 family integrating conjugative element protein | - |
| N5877_RS20275 (N5877_20275) | 4396148..4396807 | - | 660 | WP_023083778.1 | TIGR03746 family integrating conjugative element protein | - |
| N5877_RS20280 (N5877_20280) | 4396804..4397190 | - | 387 | WP_017001410.1 | TIGR03750 family conjugal transfer protein | - |
| N5877_RS20285 (N5877_20285) | 4397201..4397557 | - | 357 | WP_023083777.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| N5877_RS20290 (N5877_20290) | 4397575..4397814 | - | 240 | WP_003123360.1 | TIGR03758 family integrating conjugative element protein | - |
| N5877_RS20295 (N5877_20295) | 4397811..4398149 | - | 339 | WP_023083775.1 | RAQPRD family integrative conjugative element protein | - |
| N5877_RS20300 (N5877_20300) | 4398242..4398541 | - | 300 | WP_023083774.1 | hypothetical protein | - |
| N5877_RS20305 (N5877_20305) | 4398759..4399025 | + | 267 | WP_223195009.1 | DUF2845 domain-containing protein | - |
| N5877_RS20310 (N5877_20310) | 4399070..4400179 | - | 1110 | WP_023083225.1 | hypothetical protein | - |
| N5877_RS20315 (N5877_20315) | 4400311..4401792 | - | 1482 | WP_023083224.1 | UvrD-helicase domain-containing protein | - |
| N5877_RS20320 (N5877_20320) | 4402033..4402524 | - | 492 | WP_031631905.1 | hypothetical protein | - |
| N5877_RS20325 (N5877_20325) | 4402542..4403288 | - | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| N5877_RS20330 (N5877_20330) | 4403288..4405519 | - | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| N5877_RS20335 (N5877_20335) | 4405523..4405792 | - | 270 | WP_003099820.1 | hypothetical protein | - |
| N5877_RS20340 (N5877_20340) | 4405801..4406301 | - | 501 | WP_004352788.1 | integrating conjugative element protein | - |
| N5877_RS20345 (N5877_20345) | 4406298..4406879 | - | 582 | WP_003123352.1 | hypothetical protein | VF |
| N5877_RS20350 (N5877_20350) | 4406864..4407619 | - | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| N5877_RS20355 (N5877_20355) | 4407630..4408322 | - | 693 | WP_004352794.1 | hypothetical protein | - |
| N5877_RS20360 (N5877_20360) | 4408582..4409448 | - | 867 | WP_004352797.1 | IS3 family transposase ISPosp5 | Transposase |
| N5877_RS20365 (N5877_20365) | 4409445..4409738 | - | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| N5877_RS20370 (N5877_20370) | 4409944..4410327 | + | 384 | WP_123789178.1 | hypothetical protein | - |
| N5877_RS20375 (N5877_20375) | 4410352..4412601 | - | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| N5877_RS20380 (N5877_20380) | 4412706..4414208 | - | 1503 | WP_261737392.1 | class I SAM-dependent methyltransferase | - |
| N5877_RS20385 (N5877_20385) | 4414670..4415281 | - | 612 | Protein_4017 | DUF3275 family protein | - |
| N5877_RS20390 (N5877_20390) | 4415338..4415688 | - | 351 | WP_004347949.1 | hypothetical protein | - |
| N5877_RS20395 (N5877_20395) | 4415924..4416631 | - | 708 | WP_004352808.1 | hypothetical protein | - |
| N5877_RS20400 (N5877_20400) | 4417116..4417313 | - | 198 | WP_015503588.1 | hypothetical protein | - |
| N5877_RS20405 (N5877_20405) | 4417387..4417545 | - | 159 | WP_003109368.1 | hypothetical protein | - |
| N5877_RS20410 (N5877_20410) | 4417683..4418162 | - | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| N5877_RS20415 (N5877_20415) | 4418487..4418621 | - | 135 | WP_003099783.1 | hypothetical protein | - |
| N5877_RS20420 (N5877_20420) | 4418623..4418799 | - | 177 | WP_015503587.1 | hypothetical protein | - |
| N5877_RS20425 (N5877_20425) | 4418874..4419263 | - | 390 | WP_004352820.1 | hypothetical protein | - |
| N5877_RS20430 (N5877_20430) | 4420185..4420622 | - | 438 | WP_004352822.1 | hypothetical protein | VF |
| N5877_RS20435 (N5877_20435) | 4420651..4421979 | - | 1329 | WP_004352824.1 | hypothetical protein | VF |
| N5877_RS20440 (N5877_20440) | 4421984..4422925 | - | 942 | WP_004352826.1 | ATPase, T2SS/T4P/T4SS family | - |
| N5877_RS20445 (N5877_20445) | 4422922..4423452 | - | 531 | WP_004352827.1 | hypothetical protein | VF |
| N5877_RS20450 (N5877_20450) | 4423474..4424553 | - | 1080 | WP_003123335.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| N5877_RS20455 (N5877_20455) | 4424553..4426133 | - | 1581 | WP_003123334.1 | hypothetical protein | VF |
| N5877_RS20460 (N5877_20460) | 4426142..4426675 | - | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| N5877_RS20465 (N5877_20465) | 4426665..4427990 | - | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| N5877_RS20470 (N5877_20470) | 4427994..4429703 | - | 1710 | WP_004352834.1 | hypothetical protein | VF |
| N5877_RS20475 (N5877_20475) | 4429703..4430827 | - | 1125 | WP_260886777.1 | hypothetical protein | VF |
| N5877_RS20480 (N5877_20480) | 4431001..4432254 | - | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| N5877_RS20485 (N5877_20485) | 4432287..4433069 | - | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| N5877_RS20490 (N5877_20490) | 4433191..4435164 | - | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| N5877_RS20495 (N5877_20495) | 4435161..4437050 | - | 1890 | WP_003105732.1 | hypothetical protein | - |
| N5877_RS20500 (N5877_20500) | 4437271..4437480 | - | 210 | WP_003105733.1 | cold-shock protein | - |
| N5877_RS20505 (N5877_20505) | 4437788..4439707 | - | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| N5877_RS20510 (N5877_20510) | 4439963..4440193 | + | 231 | WP_031634724.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N5877_RS20515 (N5877_20515) | 4440193..4440603 | + | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| N5877_RS20520 (N5877_20520) | 4440619..4440816 | + | 198 | WP_023083219.1 | hypothetical protein | - |
| N5877_RS20525 (N5877_20525) | 4440830..4441048 | + | 219 | WP_023083218.1 | hypothetical protein | - |
| N5877_RS20530 (N5877_20530) | 4441114..4441281 | - | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| N5877_RS20535 (N5877_20535) | 4441437..4441925 | - | 489 | WP_004352840.1 | single-stranded DNA-binding protein | - |
| N5877_RS20540 (N5877_20540) | 4441955..4442794 | - | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| N5877_RS20545 (N5877_20545) | 4442841..4443389 | - | 549 | WP_004352841.1 | DUF3158 family protein | - |
| N5877_RS20550 (N5877_20550) | 4443395..4444123 | - | 729 | WP_004352842.1 | TIGR03761 family integrating conjugative element protein | - |
| N5877_RS20555 (N5877_20555) | 4444280..4445077 | - | 798 | WP_235597565.1 | hypothetical protein | - |
| N5877_RS20560 (N5877_20560) | 4445074..4446345 | - | 1272 | WP_023083217.1 | STY4528 family pathogenicity island replication protein | - |
| N5877_RS20565 (N5877_20565) | 4446342..4447109 | - | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| N5877_RS20570 (N5877_20570) | 4447137..4448873 | - | 1737 | WP_004352845.1 | ParB family protein | - |
| N5877_RS20575 (N5877_20575) | 4448870..4449124 | - | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| N5877_RS20580 (N5877_20580) | 4449127..4450143 | - | 1017 | WP_004352847.1 | nucleoid-associated protein YejK | - |
| N5877_RS20585 (N5877_20585) | 4450143..4450376 | - | 234 | WP_003103841.1 | hypothetical protein | - |
| N5877_RS20590 (N5877_20590) | 4450369..4450611 | - | 243 | WP_023083215.1 | hypothetical protein | - |
| N5877_RS20595 (N5877_20595) | 4450604..4450861 | - | 258 | WP_004352848.1 | hypothetical protein | - |
| N5877_RS20600 (N5877_20600) | 4450858..4451385 | - | 528 | WP_004352849.1 | hypothetical protein | - |
| N5877_RS20605 (N5877_20605) | 4451375..4451560 | - | 186 | WP_023083214.1 | hypothetical protein | - |
| N5877_RS20610 (N5877_20610) | 4451738..4452184 | + | 447 | WP_031631896.1 | hypothetical protein | - |
| N5877_RS20615 (N5877_20615) | 4452623..4453966 | - | 1344 | WP_023083212.1 | replicative DNA helicase | - |
| N5877_RS20620 (N5877_20620) | 4453963..4454187 | - | 225 | WP_003134074.1 | hypothetical protein | - |
| N5877_RS20625 (N5877_20625) | 4454171..4454878 | - | 708 | WP_023083211.1 | HNH endonuclease signature motif containing protein | - |
| N5877_RS20630 (N5877_20630) | 4454875..4455576 | - | 702 | WP_023083210.1 | DUF2786 domain-containing protein | - |
| N5877_RS20635 (N5877_20635) | 4455576..4456727 | - | 1152 | WP_023083209.1 | Lar family restriction alleviation protein | - |
| N5877_RS20640 (N5877_20640) | 4456724..4457221 | - | 498 | WP_003111783.1 | hypothetical protein | - |
| N5877_RS20645 (N5877_20645) | 4457218..4457955 | - | 738 | WP_023083208.1 | hypothetical protein | - |
| N5877_RS20650 (N5877_20650) | 4457957..4458823 | - | 867 | WP_003111785.1 | ParA family protein | - |
| N5877_RS20660 (N5877_20660) | 4459189..4463262 | - | 4074 | WP_019726813.1 | two-partner secretion system exoprotein TpsA4 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|