MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 88844 bp
Accession: NZ_CP104584 Location: 5593270..5682113 Organism: Pseudomonas aeruginosa strain WTJH2 Replicon: chromosome
Accession: NZ_CP104584 Location: 5593270..5682113 Organism: Pseudomonas aeruginosa strain WTJH2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5876_RS26030 (N5876_26030) | 5588842..5593041 | + | 4200 | WP_023083207.1 | two-partner secretion system exoprotein TpsA4 | - |
| N5876_RS26040 (N5876_26040) | 5593407..5594273 | + | 867 | WP_003111785.1 | ParA family protein | - |
| N5876_RS26045 (N5876_26045) | 5594275..5595012 | + | 738 | WP_023083208.1 | hypothetical protein | - |
| N5876_RS26050 (N5876_26050) | 5595009..5595506 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| N5876_RS26055 (N5876_26055) | 5595503..5596654 | + | 1152 | WP_023083209.1 | Lar family restriction alleviation protein | - |
| N5876_RS26060 (N5876_26060) | 5596654..5597355 | + | 702 | WP_023083210.1 | DUF2786 domain-containing protein | - |
| N5876_RS26065 (N5876_26065) | 5597352..5598059 | + | 708 | WP_023083211.1 | HNH endonuclease signature motif containing protein | - |
| N5876_RS26070 (N5876_26070) | 5598043..5598267 | + | 225 | WP_003134074.1 | hypothetical protein | - |
| N5876_RS26075 (N5876_26075) | 5598264..5599607 | + | 1344 | WP_023083212.1 | replicative DNA helicase | - |
| N5876_RS26080 (N5876_26080) | 5600046..5600492 | - | 447 | WP_031631896.1 | hypothetical protein | - |
| N5876_RS26085 (N5876_26085) | 5600670..5600855 | + | 186 | WP_023083214.1 | hypothetical protein | - |
| N5876_RS26090 (N5876_26090) | 5600845..5601372 | + | 528 | WP_004352849.1 | hypothetical protein | - |
| N5876_RS26095 (N5876_26095) | 5601369..5601626 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| N5876_RS26100 (N5876_26100) | 5601619..5601861 | + | 243 | WP_023083215.1 | hypothetical protein | - |
| N5876_RS26105 (N5876_26105) | 5601854..5602087 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| N5876_RS26110 (N5876_26110) | 5602087..5603103 | + | 1017 | WP_004352847.1 | nucleoid-associated protein YejK | - |
| N5876_RS26115 (N5876_26115) | 5603106..5603360 | + | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| N5876_RS26120 (N5876_26120) | 5603357..5605093 | + | 1737 | WP_004352845.1 | ParB family protein | - |
| N5876_RS26125 (N5876_26125) | 5605121..5605888 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| N5876_RS26130 (N5876_26130) | 5605885..5607156 | + | 1272 | WP_023083217.1 | STY4528 family pathogenicity island replication protein | - |
| N5876_RS26135 (N5876_26135) | 5607153..5607950 | + | 798 | WP_235597565.1 | hypothetical protein | - |
| N5876_RS26140 (N5876_26140) | 5608107..5608835 | + | 729 | WP_004352842.1 | TIGR03761 family integrating conjugative element protein | - |
| N5876_RS26145 (N5876_26145) | 5608841..5609389 | + | 549 | WP_004352841.1 | DUF3158 family protein | - |
| N5876_RS26150 (N5876_26150) | 5609436..5610275 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| N5876_RS26155 (N5876_26155) | 5610305..5610793 | + | 489 | WP_004352840.1 | single-stranded DNA-binding protein | - |
| N5876_RS26160 (N5876_26160) | 5610949..5611116 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| N5876_RS26165 (N5876_26165) | 5611182..5611400 | - | 219 | WP_023083218.1 | hypothetical protein | - |
| N5876_RS26170 (N5876_26170) | 5611414..5611611 | - | 198 | WP_023083219.1 | hypothetical protein | - |
| N5876_RS26175 (N5876_26175) | 5611627..5612037 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| N5876_RS26180 (N5876_26180) | 5612037..5612267 | - | 231 | WP_031634724.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N5876_RS26185 (N5876_26185) | 5612523..5614442 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| N5876_RS26190 (N5876_26190) | 5614750..5614959 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| N5876_RS26195 (N5876_26195) | 5615180..5617069 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| N5876_RS26200 (N5876_26200) | 5617066..5619039 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| N5876_RS26205 (N5876_26205) | 5619161..5619943 | + | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| N5876_RS26210 (N5876_26210) | 5619976..5621229 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| N5876_RS26215 (N5876_26215) | 5621403..5622527 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| N5876_RS26220 (N5876_26220) | 5622527..5624236 | + | 1710 | WP_004352834.1 | hypothetical protein | VF |
| N5876_RS26225 (N5876_26225) | 5624240..5625565 | + | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| N5876_RS26230 (N5876_26230) | 5625555..5626088 | + | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| N5876_RS26235 (N5876_26235) | 5626097..5627677 | + | 1581 | WP_003123334.1 | hypothetical protein | VF |
| N5876_RS26240 (N5876_26240) | 5627677..5628756 | + | 1080 | WP_003123335.1 | hypothetical protein | VF |
| N5876_RS26245 (N5876_26245) | 5628778..5629308 | + | 531 | WP_004352827.1 | hypothetical protein | VF |
| N5876_RS26250 (N5876_26250) | 5629305..5630246 | + | 942 | WP_004352826.1 | ATPase, T2SS/T4P/T4SS family | - |
| N5876_RS26255 (N5876_26255) | 5630251..5631579 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| N5876_RS26260 (N5876_26260) | 5631608..5632045 | + | 438 | WP_004352822.1 | hypothetical protein | VF |
| N5876_RS26265 (N5876_26265) | 5632967..5633356 | + | 390 | WP_004352820.1 | hypothetical protein | - |
| N5876_RS26270 (N5876_26270) | 5633431..5633607 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| N5876_RS26275 (N5876_26275) | 5633609..5633743 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| N5876_RS26280 (N5876_26280) | 5634068..5634547 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| N5876_RS26285 (N5876_26285) | 5634685..5634843 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| N5876_RS26290 (N5876_26290) | 5634917..5635114 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| N5876_RS26295 (N5876_26295) | 5635599..5636306 | + | 708 | WP_004352808.1 | hypothetical protein | - |
| N5876_RS26300 (N5876_26300) | 5636542..5636892 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| N5876_RS26305 (N5876_26305) | 5636949..5637560 | + | 612 | Protein_5204 | DUF3275 family protein | - |
| N5876_RS26310 (N5876_26310) | 5637843..5638205 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| N5876_RS26315 (N5876_26315) | 5638273..5638527 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| N5876_RS26320 (N5876_26320) | 5638620..5639225 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| N5876_RS26325 (N5876_26325) | 5639255..5640700 | + | 1446 | WP_003125297.1 | DUF6094 domain-containing protein | - |
| N5876_RS26330 (N5876_26330) | 5640805..5643054 | + | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| N5876_RS26335 (N5876_26335) | 5643079..5643462 | - | 384 | WP_123789178.1 | hypothetical protein | - |
| N5876_RS26340 (N5876_26340) | 5643668..5643961 | + | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| N5876_RS26345 (N5876_26345) | 5643958..5644824 | + | 867 | WP_004352797.1 | IS3 family transposase ISPosp5 | Transposase |
| N5876_RS26350 (N5876_26350) | 5645084..5645776 | + | 693 | WP_004352794.1 | hypothetical protein | - |
| N5876_RS26355 (N5876_26355) | 5645787..5646542 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| N5876_RS26360 (N5876_26360) | 5646527..5647108 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| N5876_RS26365 (N5876_26365) | 5647105..5647605 | + | 501 | WP_004352788.1 | integrating conjugative element protein | - |
| N5876_RS26370 (N5876_26370) | 5647614..5647883 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| N5876_RS26375 (N5876_26375) | 5647887..5650118 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| N5876_RS26380 (N5876_26380) | 5650118..5650864 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| N5876_RS26385 (N5876_26385) | 5650882..5651373 | + | 492 | WP_031631905.1 | hypothetical protein | - |
| N5876_RS26390 (N5876_26390) | 5651614..5653095 | + | 1482 | WP_023083224.1 | UvrD-helicase domain-containing protein | - |
| N5876_RS26395 (N5876_26395) | 5653227..5654336 | + | 1110 | WP_023083225.1 | hypothetical protein | - |
| N5876_RS26400 (N5876_26400) | 5654381..5654647 | - | 267 | WP_223195009.1 | DUF2845 domain-containing protein | - |
| N5876_RS26405 (N5876_26405) | 5654865..5655164 | + | 300 | WP_023083774.1 | hypothetical protein | - |
| N5876_RS26410 (N5876_26410) | 5655257..5655595 | + | 339 | WP_023083775.1 | RAQPRD family integrative conjugative element protein | - |
| N5876_RS26415 (N5876_26415) | 5655592..5655831 | + | 240 | WP_003123360.1 | TIGR03758 family integrating conjugative element protein | - |
| N5876_RS26420 (N5876_26420) | 5655849..5656205 | + | 357 | WP_023083777.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| N5876_RS26425 (N5876_26425) | 5656216..5656602 | + | 387 | WP_017001410.1 | TIGR03750 family conjugal transfer protein | - |
| N5876_RS26430 (N5876_26430) | 5656599..5657258 | + | 660 | WP_023083778.1 | TIGR03746 family integrating conjugative element protein | - |
| N5876_RS26435 (N5876_26435) | 5657255..5658139 | + | 885 | WP_023083779.1 | TIGR03749 family integrating conjugative element protein | - |
| N5876_RS26440 (N5876_26440) | 5658123..5659628 | + | 1506 | WP_023083780.1 | TIGR03752 family integrating conjugative element protein | - |
| N5876_RS26445 (N5876_26445) | 5659606..5660049 | + | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| N5876_RS26450 (N5876_26450) | 5660049..5662991 | + | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| N5876_RS26455 (N5876_26455) | 5662988..5663272 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| N5876_RS26460 (N5876_26460) | 5663269..5663928 | + | 660 | WP_019484424.1 | DsbA family protein | - |
| N5876_RS26465 (N5876_26465) | 5663925..5664143 | - | 219 | WP_019484423.1 | hypothetical protein | - |
| N5876_RS26470 (N5876_26470) | 5666284..5666715 | + | 432 | WP_023083783.1 | TIGR03757 family integrating conjugative element protein | - |
| N5876_RS26475 (N5876_26475) | 5666715..5667653 | + | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| N5876_RS26480 (N5876_26480) | 5667671..5669053 | + | 1383 | WP_023083784.1 | integrating conjugative element protein | - |
| N5876_RS26485 (N5876_26485) | 5669053..5669400 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| N5876_RS26490 (N5876_26490) | 5669397..5670911 | + | 1515 | WP_023083785.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| N5876_RS26495 (N5876_26495) | 5670968..5671306 | - | 339 | WP_023083786.1 | hypothetical protein | - |
| N5876_RS26500 (N5876_26500) | 5671425..5671697 | + | 273 | WP_023083787.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| N5876_RS26505 (N5876_26505) | 5671701..5672051 | + | 351 | WP_023083788.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N5876_RS26510 (N5876_26510) | 5672462..5674921 | - | 2460 | WP_023083789.1 | ATP-binding protein | - |
| N5876_RS26515 (N5876_26515) | 5675209..5676936 | - | 1728 | WP_023083790.1 | ATP-binding protein | - |
| N5876_RS26520 (N5876_26520) | 5676947..5677960 | - | 1014 | WP_023083791.1 | SIR2 family protein | - |
| N5876_RS26525 (N5876_26525) | 5678502..5680421 | + | 1920 | WP_023083792.1 | MobH family relaxase | - |
| N5876_RS26530 (N5876_26530) | 5680418..5681698 | + | 1281 | WP_023083793.1 | hypothetical protein ; Integrase | Integrase |
| N5876_RS26550 (N5876_26550) | 5682551..5685115 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| N5876_RS26555 (N5876_26555) | 5685271..5685999 | - | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| N5876_RS26560 (N5876_26560) | 5685996..5686958 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|