MGE detailed information
MGE type: Genomic_island MGE length: 31953 bp
Accession: NZ_CP104583 Location: 2384964..2416916 Organism: Pseudomonas sp. GD03721 Replicon: chromosome
Accession: NZ_CP104583 Location: 2384964..2416916 Organism: Pseudomonas sp. GD03721 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O88_RS11450 (N5O88_11455) | 2380006..2380857 | - | 852 | WP_279530411.1 | nitrate ABC transporter permease | - |
| N5O88_RS11455 (N5O88_11460) | 2380870..2382153 | - | 1284 | WP_279530412.1 | ABC transporter substrate-binding protein | - |
| N5O88_RS11460 (N5O88_11465) | 2382538..2382852 | - | 315 | WP_279530413.1 | transcriptional regulator | - |
| N5O88_RS11465 (N5O88_11470) | 2383007..2383399 | + | 393 | WP_147812150.1 | hypothetical protein | - |
| N5O88_RS11470 (N5O88_11475) | 2383592..2384281 | - | 690 | WP_279530414.1 | crotonase/enoyl-CoA hydratase family protein | - |
| N5O88_RS11475 (N5O88_11480) | 2384469..2384687 | + | 219 | WP_125879830.1 | hypothetical protein | - |
| N5O88_RS11485 (N5O88_11490) | 2385243..2385410 | - | 168 | WP_279530415.1 | hypothetical protein | - |
| N5O88_RS11490 (N5O88_11495) | 2385599..2385775 | - | 177 | Protein_2254 | IS5 family transposase ISPa67 | Transposase |
| N5O88_RS11495 (N5O88_11500) | 2385780..2386340 | - | 561 | Protein_2255 | IS66 family transposase ISPpu13 | Transposase |
| N5O88_RS11500 (N5O88_11505) | 2386360..2386719 | - | 360 | WP_003460146.1 | IS66 family transposase ISPpu15 | Transposase |
| N5O88_RS11505 (N5O88_11510) | 2386987..2387283 | + | 297 | WP_279530416.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| N5O88_RS11510 (N5O88_11515) | 2387286..2387687 | + | 402 | WP_279530417.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| N5O88_RS11515 (N5O88_11520) | 2388080..2388286 | + | 207 | WP_147811840.1 | hypothetical protein | - |
| N5O88_RS11520 (N5O88_11525) | 2388394..2389536 | + | 1143 | WP_279530418.1 | elongation factor P maturation arginine rhamnosyltransferase EarP | - |
| N5O88_RS11525 (N5O88_11530) | 2389571..2390143 | + | 573 | WP_003240094.1 | elongation factor P | - |
| N5O88_RS11530 (N5O88_11535) | 2390217..2391179 | - | 963 | WP_147811837.1 | Putative sialic acid transporter | VF |
| N5O88_RS11535 (N5O88_11540) | 2391281..2392048 | + | 768 | WP_279530419.1 | sulfite exporter TauE/SafE family protein | - |
| N5O88_RS11540 (N5O88_11545) | 2392043..2392159 | - | 117 | Protein_2264 | LysR family transcriptional regulator | - |
| N5O88_RS11545 (N5O88_11550) | 2392195..2392866 | + | 672 | Protein_2265 | DMT family transporter | - |
| N5O88_RS11550 (N5O88_11555) | 2392981..2394327 | - | 1347 | WP_279530420.1 | hypothetical protein | VF |
| N5O88_RS11555 (N5O88_11560) | 2394431..2394616 | - | 186 | WP_279530421.1 | hypothetical protein | - |
| N5O88_RS11560 (N5O88_11565) | 2394878..2395099 | + | 222 | WP_279533165.1 | type I restriction endonuclease | - |
| N5O88_RS11565 (N5O88_11570) | 2395439..2395654 | + | 216 | WP_147811833.1 | DUF45 domain-containing protein | - |
| N5O88_RS11570 (N5O88_11575) | 2395740..2396897 | - | 1158 | WP_279530422.1 | diguanylate cyclase | - |
| N5O88_RS11575 (N5O88_11580) | 2397003..2397137 | + | 135 | WP_236408944.1 | transposase domain-containing protein | - |
| N5O88_RS11580 (N5O88_11585) | 2397408..2398784 | - | 1377 | WP_279534979.1 | Adaptive-response sensory-kinase SasA | VF |
| N5O88_RS11585 (N5O88_11590) | 2398787..2399464 | - | 678 | WP_004374688.1 | Regulator of RpoS | VF |
| N5O88_RS11590 (N5O88_11595) | 2399671..2400030 | + | 360 | WP_003246763.1 | co-regulatory protein PtrA N-terminal domain-containing protein | - |
| N5O88_RS11595 (N5O88_11600) | 2400197..2400754 | + | 558 | WP_003139550.1 | plastocyanin/azurin family copper-binding protein | - |
| N5O88_RS11600 (N5O88_11605) | 2400902..2401435 | + | 534 | WP_003246762.1 | cupredoxin family protein | - |
| N5O88_RS11605 (N5O88_11610) | 2401515..2401763 | + | 249 | WP_003246761.1 | DUF2933 domain-containing protein | - |
| N5O88_RS11610 (N5O88_11615) | 2402024..2402773 | + | 750 | WP_279530424.1 | IS5 family transposase ISPa67 | Transposase |
| N5O88_RS11615 (N5O88_11620) | 2402758..2404989 | + | 2232 | WP_279530425.1 | copper-translocating P-type ATPase | - |
| N5O88_RS11620 (N5O88_11625) | 2405167..2405367 | + | 201 | WP_003246756.1 | heavy metal-associated domain-containing protein | - |
| N5O88_RS11625 (N5O88_11630) | 2405387..2405701 | - | 315 | WP_004374672.1 | hypothetical protein | - |
| N5O88_RS11630 (N5O88_11635) | 2405752..2406546 | - | 795 | WP_003246754.1 | DNA-binding domain-containing protein | - |
| N5O88_RS11635 (N5O88_11640) | 2406543..2407379 | - | 837 | WP_004374664.1 | DUF692 domain-containing protein | - |
| N5O88_RS11640 (N5O88_11645) | 2407424..2407684 | - | 261 | WP_003460126.1 | membrane protein | - |
| N5O88_RS11645 (N5O88_11650) | 2407968..2408174 | + | 207 | WP_003460125.1 | co-regulatory protein PtrA N-terminal domain-containing protein | - |
| N5O88_RS11650 (N5O88_11655) | 2408362..2410158 | + | 1797 | WP_279534980.1 | copper resistance system multicopper oxidase | - |
| N5O88_RS11655 (N5O88_11660) | 2410171..2410485 | + | 315 | WP_279530428.1 | hypothetical protein | - |
| N5O88_RS11660 (N5O88_11665) | 2410475..2411566 | + | 1092 | WP_279530429.1 | copper resistance protein B | - |
| N5O88_RS11665 (N5O88_11670) | 2411576..2412418 | + | 843 | WP_279530430.1 | cytochrome c | - |
| N5O88_RS11670 (N5O88_11675) | 2412408..2412851 | + | 444 | WP_112211902.1 | DUF411 domain-containing protein | - |
| N5O88_RS11675 (N5O88_11680) | 2413031..2413852 | - | 822 | Protein_2291 | OprD family outer membrane porin | - |
| N5O88_RS11680 (N5O88_11685) | 2413899..2414258 | + | 360 | WP_023445190.1 | IS66 family transposase ISPsy34 | Transposase |
| N5O88_RS11685 (N5O88_11690) | 2414277..2415836 | + | 1560 | WP_279530431.1 | IS66 family transposase ISPpu13 | Transposase |
| N5O88_RS11690 (N5O88_11695) | 2415872..2416426 | - | 555 | Protein_2294 | OprD family outer membrane porin | - |
| N5O88_RS11695 (N5O88_11700) | 2416584..2416916 | - | 333 | WP_106732298.1 | DUF2790 domain-containing protein | - |
| N5O88_RS11700 (N5O88_11705) | 2417062..2420211 | - | 3150 | WP_279530432.1 | efflux RND transporter permease subunit | - |
| N5O88_RS11705 (N5O88_11710) | 2420208..2421668 | - | 1461 | WP_279530433.1 | efflux RND transporter periplasmic adaptor subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|