MGE detailed information
MGE type: Genomic_island MGE length: 31954 bp
Accession: NZ_CP104582 Location: 2386001..2417954 Organism: Pseudomonas sp. GD03919 Replicon: chromosome
Accession: NZ_CP104582 Location: 2386001..2417954 Organism: Pseudomonas sp. GD03919 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O87_RS11460 (N5O87_11465) | 2381043..2381894 | - | 852 | WP_279530411.1 | nitrate ABC transporter permease | - |
| N5O87_RS11465 (N5O87_11470) | 2381907..2383190 | - | 1284 | WP_279530412.1 | ABC transporter substrate-binding protein | - |
| N5O87_RS11470 (N5O87_11475) | 2383575..2383889 | - | 315 | WP_279530413.1 | transcriptional regulator | - |
| N5O87_RS11475 (N5O87_11480) | 2384044..2384436 | + | 393 | WP_147812150.1 | hypothetical protein | - |
| N5O87_RS11480 (N5O87_11485) | 2384629..2385318 | - | 690 | WP_279530414.1 | crotonase/enoyl-CoA hydratase family protein | - |
| N5O87_RS11485 (N5O87_11490) | 2385506..2385724 | + | 219 | WP_125879830.1 | hypothetical protein | - |
| N5O87_RS11495 (N5O87_11500) | 2386280..2386447 | - | 168 | WP_279530415.1 | hypothetical protein | - |
| N5O87_RS11500 (N5O87_11505) | 2386636..2386812 | - | 177 | Protein_2256 | IS5 family transposase ISPa67 | Transposase |
| N5O87_RS11505 (N5O87_11510) | 2386817..2387377 | - | 561 | Protein_2257 | IS66 family transposase ISPpu13 | Transposase |
| N5O87_RS11510 (N5O87_11515) | 2387397..2387756 | - | 360 | WP_003460146.1 | IS66 family transposase ISPpu15 | Transposase |
| N5O87_RS11515 (N5O87_11520) | 2388024..2388320 | + | 297 | WP_279530416.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| N5O87_RS11520 (N5O87_11525) | 2388323..2388724 | + | 402 | WP_279530417.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| N5O87_RS11525 (N5O87_11530) | 2389117..2389323 | + | 207 | WP_147811840.1 | hypothetical protein | - |
| N5O87_RS11530 (N5O87_11535) | 2389431..2390573 | + | 1143 | WP_279530418.1 | elongation factor P maturation arginine rhamnosyltransferase EarP | - |
| N5O87_RS11535 (N5O87_11540) | 2390608..2391180 | + | 573 | WP_003240094.1 | elongation factor P | - |
| N5O87_RS11540 (N5O87_11545) | 2391254..2392216 | - | 963 | WP_147811837.1 | HTH-type transcriptional regulator DmlR | VF |
| N5O87_RS11545 (N5O87_11550) | 2392318..2393085 | + | 768 | WP_279530419.1 | sulfite exporter TauE/SafE family protein | - |
| N5O87_RS11550 (N5O87_11555) | 2393080..2393196 | - | 117 | Protein_2266 | LysR family transcriptional regulator | - |
| N5O87_RS11555 (N5O87_11560) | 2393232..2393903 | + | 672 | Protein_2267 | DMT family transporter | - |
| N5O87_RS11560 (N5O87_11565) | 2394018..2395364 | - | 1347 | WP_279530420.1 | Phospho-2-dehydro-3-deoxyheptonate aldolase | VF |
| N5O87_RS11565 (N5O87_11570) | 2395468..2395653 | - | 186 | WP_279530421.1 | hypothetical protein | - |
| N5O87_RS11570 (N5O87_11575) | 2395915..2396136 | + | 222 | WP_279533165.1 | type I restriction endonuclease | - |
| N5O87_RS11575 (N5O87_11580) | 2396476..2396691 | + | 216 | WP_147811833.1 | DUF45 domain-containing protein | - |
| N5O87_RS11580 (N5O87_11585) | 2396777..2397934 | - | 1158 | WP_279530422.1 | diguanylate cyclase | - |
| N5O87_RS11585 (N5O87_11590) | 2398040..2398174 | + | 135 | WP_236408944.1 | transposase domain-containing protein | - |
| N5O87_RS11590 (N5O87_11595) | 2398445..2399821 | - | 1377 | WP_279530423.1 | Sensor histidine kinase CusS | VF |
| N5O87_RS11595 (N5O87_11600) | 2399824..2400501 | - | 678 | WP_004374688.1 | Transcriptional activator protein CopR | VF |
| N5O87_RS11600 (N5O87_11605) | 2400708..2401067 | + | 360 | WP_003246763.1 | co-regulatory protein PtrA N-terminal domain-containing protein | - |
| N5O87_RS11605 (N5O87_11610) | 2401234..2401791 | + | 558 | WP_003139550.1 | plastocyanin/azurin family copper-binding protein | - |
| N5O87_RS11610 (N5O87_11615) | 2401939..2402472 | + | 534 | WP_003246762.1 | cupredoxin family protein | - |
| N5O87_RS11615 (N5O87_11620) | 2402552..2402800 | + | 249 | WP_003246761.1 | DUF2933 domain-containing protein | - |
| N5O87_RS11620 (N5O87_11625) | 2403061..2403810 | + | 750 | WP_279530424.1 | IS5 family transposase ISPa67 | Transposase |
| N5O87_RS11625 (N5O87_11630) | 2403795..2406026 | + | 2232 | WP_279530425.1 | copper-translocating P-type ATPase | - |
| N5O87_RS11630 (N5O87_11635) | 2406204..2406404 | + | 201 | WP_003246756.1 | heavy metal-associated domain-containing protein | - |
| N5O87_RS11635 (N5O87_11640) | 2406424..2406738 | - | 315 | WP_004374672.1 | hypothetical protein | - |
| N5O87_RS11640 (N5O87_11645) | 2406789..2407583 | - | 795 | WP_279530426.1 | DNA-binding domain-containing protein | - |
| N5O87_RS11645 (N5O87_11650) | 2407580..2408416 | - | 837 | WP_004374664.1 | DUF692 domain-containing protein | - |
| N5O87_RS11650 (N5O87_11655) | 2408461..2408721 | - | 261 | WP_003460126.1 | membrane protein | - |
| N5O87_RS11655 (N5O87_11660) | 2409006..2409212 | + | 207 | WP_003460125.1 | co-regulatory protein PtrA N-terminal domain-containing protein | - |
| N5O87_RS11660 (N5O87_11665) | 2409400..2411196 | + | 1797 | WP_279530427.1 | copper resistance system multicopper oxidase | - |
| N5O87_RS11665 (N5O87_11670) | 2411209..2411523 | + | 315 | WP_279530428.1 | hypothetical protein | - |
| N5O87_RS11670 (N5O87_11675) | 2411513..2412604 | + | 1092 | WP_279530429.1 | copper resistance protein B | - |
| N5O87_RS11675 (N5O87_11680) | 2412614..2413456 | + | 843 | WP_279530430.1 | cytochrome c | - |
| N5O87_RS11680 (N5O87_11685) | 2413446..2413889 | + | 444 | WP_112211902.1 | DUF411 domain-containing protein | - |
| N5O87_RS11685 (N5O87_11690) | 2414069..2414890 | - | 822 | Protein_2293 | OprD family outer membrane porin | - |
| N5O87_RS11690 (N5O87_11695) | 2414937..2415296 | + | 360 | WP_023445190.1 | IS66 family transposase ISPsy34 | Transposase |
| N5O87_RS11695 (N5O87_11700) | 2415315..2416874 | + | 1560 | WP_279530431.1 | IS66 family transposase ISPpu13 | Transposase |
| N5O87_RS11700 (N5O87_11705) | 2416910..2417464 | - | 555 | Protein_2296 | OprD family outer membrane porin | - |
| N5O87_RS11705 (N5O87_11710) | 2417622..2417954 | - | 333 | WP_106732298.1 | DUF2790 domain-containing protein | - |
| N5O87_RS11710 (N5O87_11715) | 2418100..2421249 | - | 3150 | WP_279530432.1 | efflux RND transporter permease subunit | - |
| N5O87_RS11715 (N5O87_11720) | 2421246..2422706 | - | 1461 | WP_279530433.1 | efflux RND transporter periplasmic adaptor subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|