MGE detailed information
MGE type: Prophage MGE length: 37902 bp
Accession: NZ_CP104581 Location: 4515277..4553178 Organism: Delftia tsuruhatensis strain GD03927 Replicon: chromosome
Accession: NZ_CP104581 Location: 4515277..4553178 Organism: Delftia tsuruhatensis strain GD03927 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O86_RS20340 (N5O86_20390) | 4511372..4513786 | - | 2415 | WP_016445089.1 | endopeptidase La | - |
| N5O86_RS20345 (N5O86_20395) | 4513907..4515169 | - | 1263 | WP_012204530.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| N5O86_RS20350 (N5O86_20400) | 4515277..4515885 | - | 609 | WP_016445088.1 | hypothetical protein | VF |
| N5O86_RS20355 (N5O86_20405) | 4516021..4517331 | - | 1311 | WP_016445087.1 | trigger factor | - |
| N5O86_RS20360 (N5O86_20410) | 4517698..4518798 | - | 1101 | WP_279492869.1 | phage portal protein | - |
| N5O86_RS20365 (N5O86_20415) | 4518795..4520723 | - | 1929 | WP_279492870.1 | terminase family protein | - |
| N5O86_RS20370 (N5O86_20420) | 4520866..4521651 | + | 786 | WP_279492871.1 | GPO family capsid scaffolding protein | - |
| N5O86_RS20375 (N5O86_20425) | 4521691..4522713 | + | 1023 | WP_279492872.1 | phage major capsid protein, P2 family | - |
| N5O86_RS20380 (N5O86_20430) | 4522767..4523471 | + | 705 | WP_279492873.1 | phage terminase small subunit | - |
| N5O86_RS20385 (N5O86_20435) | 4523587..4524066 | + | 480 | WP_013803548.1 | head completion/stabilization protein | - |
| N5O86_RS20390 (N5O86_20440) | 4524068..4524298 | + | 231 | WP_013803549.1 | tail protein X | - |
| N5O86_RS20395 (N5O86_20445) | 4524314..4524553 | + | 240 | WP_013803550.1 | holin | - |
| N5O86_RS20400 (N5O86_20450) | 4524550..4525080 | + | 531 | WP_279492874.1 | lysozyme | - |
| N5O86_RS20405 (N5O86_20455) | 4525077..4525658 | + | 582 | WP_279492875.1 | DUF2514 family protein | - |
| N5O86_RS20410 (N5O86_20460) | 4525642..4526157 | + | 516 | WP_279492876.1 | phage tail protein | - |
| N5O86_RS20415 (N5O86_20465) | 4526160..4526633 | + | 474 | WP_047473302.1 | phage virion morphogenesis protein | - |
| N5O86_RS20420 (N5O86_20470) | 4526703..4527257 | + | 555 | WP_013803555.1 | phage baseplate assembly protein V | - |
| N5O86_RS20425 (N5O86_20475) | 4527257..4527616 | + | 360 | WP_047473320.1 | GPW/gp25 family protein | - |
| N5O86_RS20430 (N5O86_20480) | 4527613..4528452 | + | 840 | WP_279492878.1 | baseplate J/gp47 family protein | - |
| N5O86_RS20435 (N5O86_20485) | 4528452..4529399 | + | 948 | WP_279492879.1 | phage tail protein | - |
| N5O86_RS20440 (N5O86_20490) | 4529412..4529900 | + | 489 | WP_047473295.1 | hypothetical protein | - |
| N5O86_RS20445 (N5O86_20495) | 4529908..4532067 | + | 2160 | WP_279492880.1 | DUF4815 domain-containing protein | - |
| N5O86_RS20450 (N5O86_20500) | 4532057..4533091 | + | 1035 | WP_279492881.1 | virulence-associated protein | - |
| N5O86_RS20455 (N5O86_20505) | 4533102..4533605 | + | 504 | WP_279492882.1 | hypothetical protein | - |
| N5O86_RS20460 (N5O86_20510) | 4533602..4534027 | + | 426 | WP_279492883.1 | hypothetical protein | - |
| N5O86_RS20465 (N5O86_20515) | 4534024..4534485 | + | 462 | WP_279492884.1 | hypothetical protein | - |
| N5O86_RS20470 (N5O86_20520) | 4534656..4535852 | + | 1197 | WP_047473287.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| N5O86_RS20475 (N5O86_20525) | 4535868..4536377 | + | 510 | WP_013803566.1 | phage major tail tube protein | - |
| N5O86_RS20480 (N5O86_20530) | 4536463..4536813 | + | 351 | WP_082001587.1 | phage tail assembly protein | - |
| N5O86_RS20485 (N5O86_20535) | 4536822..4536950 | + | 129 | WP_279492886.1 | GpE family phage tail protein | - |
| N5O86_RS20490 (N5O86_20540) | 4536970..4539639 | + | 2670 | WP_156136106.1 | hypothetical protein | - |
| N5O86_RS20495 (N5O86_20545) | 4539651..4540109 | + | 459 | WP_013803570.1 | phage tail protein | - |
| N5O86_RS20500 (N5O86_20550) | 4540119..4541171 | + | 1053 | WP_047473283.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| N5O86_RS20505 (N5O86_20555) | 4541830..4542096 | + | 267 | WP_047470858.1 | BrnT family toxin | Toxin Detail |
| N5O86_RS20510 (N5O86_20560) | 4542083..4542376 | + | 294 | WP_047470848.1 | BrnA antitoxin family protein | Antitoxin Detail |
| N5O86_RS20515 (N5O86_20565) | 4542440..4542742 | + | 303 | WP_047470846.1 | hypothetical protein | - |
| N5O86_RS20520 (N5O86_20570) | 4542739..4542969 | + | 231 | WP_047470844.1 | hypothetical protein | - |
| N5O86_RS20525 (N5O86_20575) | 4543058..4543723 | - | 666 | WP_151019146.1 | hypothetical protein | - |
| N5O86_RS20530 (N5O86_20580) | 4543720..4544394 | - | 675 | WP_047470839.1 | S24 family peptidase | - |
| N5O86_RS20535 (N5O86_20585) | 4544609..4544836 | - | 228 | WP_047470837.1 | hypothetical protein | - |
| N5O86_RS20540 (N5O86_20590) | 4544935..4545141 | + | 207 | WP_047470836.1 | hypothetical protein | - |
| N5O86_RS20545 (N5O86_20595) | 4545251..4545553 | + | 303 | WP_046986207.1 | hypothetical protein | - |
| N5O86_RS20550 (N5O86_20600) | 4545588..4545716 | - | 129 | WP_279492887.1 | hypothetical protein | - |
| N5O86_RS20555 (N5O86_20605) | 4545715..4545978 | + | 264 | WP_279492888.1 | ogr/Delta-like zinc finger family protein | - |
| N5O86_RS20560 (N5O86_20610) | 4546080..4546238 | + | 159 | WP_191625463.1 | hypothetical protein | - |
| N5O86_RS20565 (N5O86_20615) | 4546235..4546648 | + | 414 | WP_279492889.1 | hypothetical protein | - |
| N5O86_RS20570 (N5O86_20620) | 4546651..4548573 | + | 1923 | WP_279492890.1 | replication endonuclease | - |
| N5O86_RS20575 (N5O86_20625) | 4548595..4548822 | + | 228 | WP_046985592.1 | hypothetical protein | - |
| N5O86_RS20580 (N5O86_20630) | 4548855..4549061 | + | 207 | WP_047470831.1 | hypothetical protein | - |
| N5O86_RS20585 (N5O86_20635) | 4549064..4549345 | + | 282 | WP_156136013.1 | hypothetical protein | - |
| N5O86_RS20590 (N5O86_20640) | 4549342..4551135 | + | 1794 | WP_047470827.1 | DNA cytosine methyltransferase | - |
| N5O86_RS20595 (N5O86_20645) | 4551132..4551593 | + | 462 | WP_047470823.1 | hypothetical protein | - |
| N5O86_RS20600 (N5O86_20650) | 4551590..4551844 | + | 255 | WP_231574384.1 | helix-turn-helix domain-containing protein | - |
| N5O86_RS20605 (N5O86_20655) | 4551858..4552148 | - | 291 | WP_016454070.1 | helix-turn-helix transcriptional regulator | - |
| N5O86_RS20610 (N5O86_20660) | 4552213..4553178 | - | 966 | WP_231574383.1 | hypothetical protein ; Integrase | Integrase |
| N5O86_RS20620 (N5O86_20670) | 4553630..4556845 | - | 3216 | WP_016449589.1 | efflux RND transporter permease subunit | - |
| N5O86_RS20625 (N5O86_20675) | 4556842..4558065 | - | 1224 | WP_047218333.1 | efflux RND transporter periplasmic adaptor subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|