258466

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) BrnTA/BrnT_toxin-BrnA
Location 4541830..4542376 Replicon chromosome
Accession NZ_CP104581
Organism Delftia tsuruhatensis strain GD03927

Toxin (Protein)


Gene name brnT Uniprot ID -
Locus tag N5O86_RS20505 Protein ID WP_047470858.1
Coordinates 4541830..4542096 (+) Length 89 a.a.

Antitoxin (Protein)


Gene name brnA Uniprot ID -
Locus tag N5O86_RS20510 Protein ID WP_047470848.1
Coordinates 4542083..4542376 (+) Length 98 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N5O86_RS20490 (N5O86_20540) 4536970..4539639 + 2670 WP_156136106.1 hypothetical protein -
N5O86_RS20495 (N5O86_20545) 4539651..4540109 + 459 WP_013803570.1 phage tail protein -
N5O86_RS20500 (N5O86_20550) 4540119..4541171 + 1053 WP_047473283.1 contractile injection system protein, VgrG/Pvc8 family -
N5O86_RS20505 (N5O86_20555) 4541830..4542096 + 267 WP_047470858.1 BrnT family toxin Toxin
N5O86_RS20510 (N5O86_20560) 4542083..4542376 + 294 WP_047470848.1 BrnA antitoxin family protein Antitoxin
N5O86_RS20515 (N5O86_20565) 4542440..4542742 + 303 WP_047470846.1 hypothetical protein -
N5O86_RS20520 (N5O86_20570) 4542739..4542969 + 231 WP_047470844.1 hypothetical protein -
N5O86_RS20525 (N5O86_20575) 4543058..4543723 - 666 WP_151019146.1 hypothetical protein -
N5O86_RS20530 (N5O86_20580) 4543720..4544394 - 675 WP_047470839.1 S24 family peptidase -
N5O86_RS20535 (N5O86_20585) 4544609..4544836 - 228 WP_047470837.1 hypothetical protein -
N5O86_RS20540 (N5O86_20590) 4544935..4545141 + 207 WP_047470836.1 hypothetical protein -
N5O86_RS20545 (N5O86_20595) 4545251..4545553 + 303 WP_046986207.1 hypothetical protein -
N5O86_RS20550 (N5O86_20600) 4545588..4545716 - 129 WP_279492887.1 hypothetical protein -
N5O86_RS20555 (N5O86_20605) 4545715..4545978 + 264 WP_279492888.1 ogr/Delta-like zinc finger family protein -
N5O86_RS20560 (N5O86_20610) 4546080..4546238 + 159 WP_191625463.1 hypothetical protein -
N5O86_RS20565 (N5O86_20615) 4546235..4546648 + 414 WP_279492889.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 4515277..4553178 37901


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease toxin, BrnT, of type II toxin-antitoxin system

(5-81)

Antitoxin

BrnA antitoxin of type II toxin-antitoxin system

(32-90)


Sequences

Toxin        


Download         Length: 89 a.a.        Molecular weight: 10040.51 Da        Isoelectric Point: 7.1646

>T258466 WP_047470858.1 NZ_CP104581:4541830-4542096 [Delftia tsuruhatensis]
MDIEFDPAKNQANIDKHGVSLEMAGHIEWSNVLCMPDSRRDYGEVREIGFAVIGQRLYVVVFVQRGQTMRIVSLRKANSR
EVKAYDAI

Download         Length: 267 bp

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 10497.19 Da        Isoelectric Point: 8.7129

>AT258466 WP_047470848.1 NZ_CP104581:4542083-4542376 [Delftia tsuruhatensis]
MTQSKKVGLIQPTAAEDAAIARGIEQDPDTLEITGDMLAEMQPLARRGRPPLEQPKMPMTMRVDADVLEAIKATGTGWQS
RVNSLLRDAVKKGKLAA

Download         Length: 294 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References