MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP104533 Location: 4276868..4296120 Organism: Escherichia coli strain E10 Replicon: chromosome
Accession: NZ_CP104533 Location: 4276868..4296120 Organism: Escherichia coli strain E10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O77_RS21240 (4272347) | 4272347..4272850 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| N5O77_RS21245 (4272863) | 4272863..4273393 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| N5O77_RS21250 (4273403) | 4273403..4276039 | - | 2637 | WP_261175540.1 | fimbrial usher FimD | - |
| N5O77_RS21255 (4276106) | 4276106..4276831 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| N5O77_RS21260 (4276868) | 4276868..4277407 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| N5O77_RS21265 (4277472) | 4277472..4278020 | - | 549 | WP_000695592.1 | hypothetical protein | VF |
| N5O77_RS21270 (4278502) | 4278502..4279098 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| N5O77_RS21275 (4279576) | 4279576..4280178 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| N5O77_RS21280 (4281634) | 4281634..4282350 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| N5O77_RS21285 (4282370) | 4282370..4283476 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| N5O77_RS21290 (4283541) | 4283541..4284521 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| N5O77_RS21295 (4284631) | 4284631..4284836 | + | 206 | Protein_4171 | HNH endonuclease | - |
| N5O77_RS21300 (4285104) | 4285104..4286344 | - | 1241 | Protein_4172 | helicase YjhR | - |
| N5O77_RS21305 (4286460) | 4286460..4286591 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| N5O77_RS21310 (4287082) | 4287082..4287339 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| N5O77_RS21315 (4287351) | 4287351..4287896 | + | 546 | WP_001350781.1 | N-acetyltransferase | Antitoxin Detail |
| N5O77_RS21320 (4287952) | 4287952..4288698 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| N5O77_RS21325 (4288867) | 4288867..4289085 | + | 219 | Protein_4177 | hypothetical protein | - |
| N5O77_RS21330 (4289123) | 4289123..4289239 | + | 117 | Protein_4178 | VOC family protein | - |
| N5O77_RS21335 (4289484) | 4289484..4290605 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| N5O77_RS21340 (4290602) | 4290602..4290880 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| N5O77_RS21345 (4290892) | 4290892..4292205 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| N5O77_RS21350 (4292218) | 4292218..4293024 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| N5O77_RS21355 (4293155) | 4293155..4293586 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| N5O77_RS21360 (4293598) | 4293598..4294230 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| N5O77_RS21365 (4294247) | 4294247..4295029 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| N5O77_RS21370 (4295332) | 4295332..4296120 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| N5O77_RS21375 (4296125) | 4296125..4297030 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| N5O77_RS21380 (4297041) | 4297041..4299008 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| N5O77_RS21385 (4299115) | 4299115..4300464 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|