MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP104533 Location: 3856890..3877244 Organism: Escherichia coli strain E10 Replicon: chromosome
Accession: NZ_CP104533 Location: 3856890..3877244 Organism: Escherichia coli strain E10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O77_RS19195 (3852255) | 3852255..3852713 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| N5O77_RS19200 (3852974) | 3852974..3854431 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| N5O77_RS19205 (3854488) | 3854488..3855102 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| N5O77_RS19210 (3855099) | 3855099..3856238 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| N5O77_RS19215 (3856428) | 3856428..3856880 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| N5O77_RS19220 (3856890) | 3856890..3857288 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| N5O77_RS19225 (3857291) | 3857291..3857584 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| N5O77_RS19230 (3857636) | 3857636..3858691 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| N5O77_RS19235 (3858762) | 3858762..3859547 | - | 786 | WP_000207544.1 | hypothetical protein | VF |
| N5O77_RS19240 (3859519) | 3859519..3861231 | + | 1713 | Protein_3770 | hypothetical protein | VF |
| N5O77_RS19245 (3861310) | 3861310..3861468 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| N5O77_RS19250 (3861551) | 3861551..3862048 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| N5O77_RS19255 (3862224) | 3862224..3862973 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| N5O77_RS19260 (3863285) | 3863285..3864025 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| N5O77_RS19265 (3863996) | 3863996..3864763 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| N5O77_RS19270 (3864968) | 3864968..3865546 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| N5O77_RS19275 (3865786) | 3865786..3868230 | + | 2445 | WP_000973137.1 | hypothetical protein | VF |
| N5O77_RS19280 (3868273) | 3868273..3868719 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| N5O77_RS19285 (3868900) | 3868900..3869670 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| N5O77_RS19290 (3869721) | 3869721..3869915 | - | 195 | Protein_3780 | ISAs1 family transposase | - |
| N5O77_RS19295 (3869941) | 3869941..3870429 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| N5O77_RS19300 (3870640) | 3870640..3871026 | - | 387 | WP_001513602.1 | hypothetical protein | - |
| N5O77_RS19305 (3871255) | 3871255..3872019 | - | 765 | Protein_3783 | ISAs1 family transposase ISEc1 | Transposase |
| N5O77_RS19310 (3872278) | 3872278..3872568 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| N5O77_RS19315 (3872543) | 3872543..3873982 | - | 1440 | WP_261175530.1 | DUF4150 domain-containing protein | - |
| N5O77_RS19320 (3873975) | 3873975..3875021 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| N5O77_RS19325 (3875128) | 3875128..3877109 | - | 1982 | Protein_3787 | hypothetical protein | VF |
| N5O77_RS19330 (3877330) | 3877330..3877848 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| N5O77_RS19335 (3878554) | 3878554..3879057 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| N5O77_RS19340 (3879080) | 3879080..3880564 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| N5O77_RS19345 (3880569) | 3880569..3880994 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|