MGE detailed information
MGE type: Conjugative plasmid MGE length: 133719 bp
Accession: NZ_CP104522 Location: 1..133719 Organism: Escherichia coli strain E5 Replicon: plasmid p1
Accession: NZ_CP104522 Location: 1..133719 Organism: Escherichia coli strain E5 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O78_RS24035 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| N5O78_RS24040 (1263) | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| N5O78_RS24045 (2124) | 2124..2312 | - | 189 | WP_001332052.1 | hypothetical protein | - |
| N5O78_RS24050 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| N5O78_RS24055 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| N5O78_RS24060 (5199) | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| N5O78_RS24065 (7449) | 7449..7628 | - | 180 | Protein_6 | transposase | - |
| N5O78_RS24070 (7767) | 7767..8980 | + | 1214 | WP_162843585.1 | IS3 family transposase IS629 | Transposase |
| N5O78_RS24075 (9128) | 9128..9453 | - | 326 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| N5O78_RS24080 (9499) | 9499..9839 | + | 341 | Protein_9 | IS3 family transposase | - |
| N5O78_RS24085 (10434) | 10434..11621 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| N5O78_RS24090 (11618) | 11618..13558 | + | 1941 | WP_000733252.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| N5O78_RS24095 (13562) | 13562..14932 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| N5O78_RS24100 (15406) | 15406..15600 | + | 195 | Protein_13 | IS200-IS605 family transposase IS200C | Transposase |
| N5O78_RS24105 (15729) | 15729..16670 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| N5O78_RS24110 (16905) | 16905..18294 | - | 1390 | Protein_15 | ISNCY family transposase ISKpn21 | Transposase |
| N5O78_RS24115 (18604) | 18604..18753 | - | 150 | Protein_16 | IS3 family transposase IS2 | Transposase |
| N5O78_RS24120 (18931) | 18931..20124 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| N5O78_RS24125 (20952) | 20952..21932 | - | 981 | WP_032072169.1 | IS5 family transposase ISKpn26 | Transposase |
| N5O78_RS24135 (24403) | 24403..24696 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| N5O78_RS24140 (24754) | 24754..24953 | - | 200 | Protein_21 | lysis protein | - |
| N5O78_RS24145 (24996) | 24996..25532 | + | 537 | Protein_22 | IS481 family transposase ISKpn28 | Transposase |
| N5O78_RS24150 (26843) | 26843..27958 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| N5O78_RS24155 (28098) | 28098..31757 | + | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| N5O78_RS24160 (31861) | 31861..33090 | + | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| N5O78_RS24165 (33175) | 33175..34131 | + | 957 | WP_000271277.1 | Ferri-bacillibactin esterase BesA | VF |
| N5O78_RS24170 (34176) | 34176..36353 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| N5O78_RS24175 (37208) | 37208..38242 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| N5O78_RS24180 (38423) | 38423..38724 | + | 302 | Protein_29 | hypothetical protein | - |
| N5O78_RS24185 (38802) | 38802..39110 | - | 309 | WP_000377483.1 | DUF6404 family protein | - |
| N5O78_RS24190 (39263) | 39263..39388 | - | 126 | Protein_31 | type II toxin-antitoxin system toxin YacB | - |
| N5O78_RS24195 (39388) | 39388..39657 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | - |
| N5O78_RS24200 (40268) | 40268..41542 | + | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| N5O78_RS24205 (41535) | 41535..43631 | + | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| N5O78_RS24210 (43801) | 43801..44112 | - | 312 | WP_001259758.1 | colicin V | - |
| N5O78_RS24215 (44090) | 44090..44326 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| N5O78_RS24220 (44445) | 44445..44888 | + | 444 | WP_001323891.1 | dehydrogenase | - |
| N5O78_RS24225 (44860) | 44860..45264 | + | 405 | WP_001389361.1 | hypothetical protein | - |
| N5O78_RS24230 (45266) | 45266..45535 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| N5O78_RS24235 (45532) | 45532..45798 | + | 267 | WP_001017350.1 | FAD-dependent oxidoreductase | - |
| N5O78_RS24240 (45854) | 45854..46306 | - | 453 | WP_000670963.1 | acyltransferase | - |
| N5O78_RS24245 (46599) | 46599..46859 | + | 261 | WP_000343091.1 | hypothetical protein | - |
| N5O78_RS24250 (46856) | 46856..47446 | + | 591 | WP_001350923.1 | hypothetical protein | - |
| N5O78_RS24255 (47508) | 47508..47684 | - | 177 | Protein_44 | DUF6404 family protein | - |
| N5O78_RS24260 (47732) | 47732..49270 | - | 1539 | WP_000099202.1 | IS66 family transposase ISEc22 | Transposase |
| N5O78_RS24265 (49319) | 49319..49666 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| N5O78_RS24270 (49663) | 49663..50067 | - | 405 | WP_000839181.1 | IS66 family transposase ISEc22 | Transposase |
| N5O78_RS24275 (50314) | 50314..50649 | + | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| N5O78_RS24280 (50671) | 50671..52551 | - | 1881 | WP_001283335.1 | colicin Ia central receptor-binding domain-containing protein | - |
| N5O78_RS24285 (52737) | 52737..53585 | - | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| N5O78_RS24290 (53631) | 53631..53909 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| N5O78_RS24295 (53909) | 53909..54178 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| N5O78_RS24300 (55094) | 55094..55951 | - | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| N5O78_RS24305 (55944) | 55944..55991 | - | 48 | WP_077822033.1 | hypothetical protein | - |
| N5O78_RS24310 (55982) | 55982..56218 | + | 237 | WP_223368648.1 | replication protein RepA | - |
| N5O78_RS24315 (56244) | 56244..56504 | - | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| N5O78_RS24320 (56594) | 56594..56950 | - | 357 | Protein_57 | thermonuclease family protein | - |
| N5O78_RS24325 (57193) | 57193..57405 | - | 213 | WP_001311693.1 | hypothetical protein | - |
| N5O78_RS24330 (57543) | 57543..58103 | - | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| N5O78_RS24335 (58158) | 58158..58903 | - | 746 | Protein_60 | conjugal transfer pilus acetylase TraX | - |
| N5O78_RS24340 (58923) | 58923..64193 | - | 5271 | WP_000986993.1 | Multifunctional conjugation protein TraI | Relaxase |
| N5O78_RS24345 (64193) | 64193..66373 | - | 2181 | WP_001493790.1 | type IV conjugative transfer system coupling protein TraD | - |
| N5O78_RS24350 (66625) | 66625..67356 | - | 732 | WP_001447147.1 | conjugal transfer complement resistance protein TraT | - |
| N5O78_RS24355 (67388) | 67388..67891 | - | 504 | WP_261306778.1 | surface exclusion protein | - |
| N5O78_RS24360 (67906) | 67906..70728 | - | 2823 | Protein_65 | conjugal transfer mating pair stabilization protein TraG | - |
| N5O78_RS24365 (70725) | 70725..72097 | - | 1373 | Protein_66 | conjugal transfer protein TraH | - |
| N5O78_RS24370 (72097) | 72097..72459 | - | 363 | WP_071779407.1 | P-type conjugative transfer protein TrbJ | - |
| N5O78_RS24375 (72389) | 72389..72934 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| N5O78_RS24380 (72921) | 72921..73205 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| N5O78_RS24385 (73324) | 73324..73671 | - | 348 | WP_001287676.1 | conjugal transfer protein TrbA | - |
| N5O78_RS24390 (73687) | 73687..74430 | - | 744 | WP_001030389.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| N5O78_RS24395 (74423) | 74423..74680 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| N5O78_RS24400 (74707) | 74707..76515 | - | 1809 | WP_000821846.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| N5O78_RS24405 (76512) | 76512..77150 | - | 639 | WP_022630459.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| N5O78_RS24410 (77159) | 77159..78151 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| N5O78_RS24415 (78148) | 78148..78780 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| N5O78_RS24420 (78777) | 78777..79163 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| N5O78_RS24425 (79160) | 79160..81787 | - | 2628 | WP_001064251.1 | type IV secretion system protein TraC | - |
| N5O78_RS24430 (81947) | 81947..82168 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| N5O78_RS24435 (82303) | 82303..82818 | - | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| N5O78_RS24440 (82815) | 82815..83066 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| N5O78_RS24445 (83078) | 83078..83275 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| N5O78_RS24450 (83262) | 83262..83852 | - | 591 | WP_000002796.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| N5O78_RS24455 (83842) | 83842..85268 | - | 1427 | Protein_84 | conjugal transfer protein TraB | - |
| N5O78_RS24460 (85268) | 85268..85996 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| N5O78_RS24465 (85983) | 85983..86549 | - | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| N5O78_RS24470 (86571) | 86571..86882 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| N5O78_RS24475 (86897) | 86897..87262 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| N5O78_RS24480 (87295) | 87295..87696 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| N5O78_RS24485 (87789) | 87789..88478 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| N5O78_RS24490 (88665) | 88665..89048 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| N5O78_RS24495 (89417) | 89417..89926 | + | 510 | WP_000759163.1 | hypothetical protein | VF |
| N5O78_RS24500 (90222) | 90222..91043 | - | 822 | WP_001234468.1 | DUF932 domain-containing protein | - |
| N5O78_RS24505 (91162) | 91162..91449 | - | 288 | WP_000107520.1 | hypothetical protein | - |
| N5O78_RS24510 (91750) | 91750..92047 | + | 298 | Protein_95 | hypothetical protein | - |
| N5O78_RS24515 (92348) | 92348..92470 | - | 123 | WP_223195199.1 | Hok/Gef family protein | - |
| N5O78_RS24520 (92415) | 92415..92528 | - | 114 | Protein_97 | DUF5431 family protein | - |
| - (92562) | 92562..92773 | + | 212 | NuclAT_0 | - | - |
| - (92562) | 92562..92773 | - | 212 | NuclAT_0 | - | - |
| - (92562) | 92562..92773 | - | 212 | NuclAT_0 | - | - |
| - (92562) | 92562..92773 | - | 212 | NuclAT_0 | - | - |
| - (92562) | 92562..92773 | - | 212 | NuclAT_0 | - | - |
| N5O78_RS24525 (92718) | 92718..93504 | - | 787 | Protein_98 | plasmid SOS inhibition protein A | - |
| N5O78_RS24530 (93501) | 93501..93935 | - | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| N5O78_RS24535 (93990) | 93990..95948 | - | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| N5O78_RS24540 (96012) | 96012..96245 | - | 234 | WP_000005988.1 | DUF905 family protein | - |
| N5O78_RS24545 (96343) | 96343..96840 | - | 498 | Protein_102 | single-stranded DNA-binding protein | - |
| N5O78_RS24550 (97141) | 97141..97560 | + | 420 | WP_015056142.1 | hypothetical protein | - |
| N5O78_RS24555 (97646) | 97646..98209 | - | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| N5O78_RS24560 (98257) | 98257..99618 | - | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| N5O78_RS24565 (99670) | 99670..99900 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| N5O78_RS24570 (100417) | 100417..100670 | + | 254 | Protein_107 | hypothetical protein | - |
| N5O78_RS24575 (100894) | 100894..101076 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| N5O78_RS24580 (101076) | 101076..101537 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| N5O78_RS24585 (101537) | 101537..101962 | - | 426 | WP_001198922.1 | antirestriction protein | - |
| N5O78_RS24590 (102364) | 102364..103335 | + | 972 | WP_000082155.1 | IS110 family transposase ISEc32 | Transposase |
| N5O78_RS24595 (103596) | 103596..103808 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| N5O78_RS24600 (103821) | 103821..104396 | - | 576 | WP_000343071.1 | hypothetical protein | - |
| N5O78_RS24605 (104465) | 104465..104812 | - | 348 | WP_001350917.1 | hypothetical protein | - |
| N5O78_RS24610 (104809) | 104809..104978 | - | 170 | Protein_115 | hypothetical protein | - |
| N5O78_RS24615 (105572) | 105572..106543 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| N5O78_RS24620 (106543) | 106543..107709 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| N5O78_RS24630 (110314) | 110314..110481 | - | 168 | WP_000638861.1 | hypothetical protein | - |
| N5O78_RS24635 (110731) | 110731..112233 | - | 1503 | WP_000715081.1 | hypothetical protein | - |
| N5O78_RS24640 (112859) | 112859..113284 | - | 426 | WP_012300440.1 | hypothetical protein | - |
| N5O78_RS24645 (113426) | 113426..113905 | + | 480 | WP_000190053.1 | hypothetical protein | - |
| N5O78_RS24650 (114345) | 114345..114770 | + | 426 | WP_025492103.1 | hypothetical protein | - |
| N5O78_RS24660 (115986) | 115986..118187 | - | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| N5O78_RS24665 (118213) | 118213..119546 | - | 1334 | Protein_126 | L-lysine N6-monooxygenase | VF |
| N5O78_RS24670 (119543) | 119543..121285 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| N5O78_RS24675 (121285) | 121285..122232 | - | 948 | WP_000011907.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| N5O78_RS24680 (122233) | 122233..123957 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| N5O78_RS24685 (124093) | 124093..125286 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| N5O78_RS24690 (125666) | 125666..126046 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| N5O78_RS24695 (126387) | 126387..126800 | - | 414 | Protein_132 | phosphopyruvate hydratase | - |
| N5O78_RS24700 (126798) | 126798..127055 | + | 258 | Protein_133 | transposase | - |
| N5O78_RS24705 (127289) | 127289..128146 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| N5O78_RS24710 (128143) | 128143..129000 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| N5O78_RS24715 (128997) | 128997..129824 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| N5O78_RS24720 (129824) | 129824..130738 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| N5O78_RS24725 (131094) | 131094..131791 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| N5O78_RS24730 (131971) | 131971..132484 | - | 514 | Protein_139 | DUF4113 domain-containing protein | - |
| N5O78_RS24735 (132545) | 132545..132649 | - | 105 | Protein_140 | AAA family ATPase | - |
| N5O78_RS24740 (132651) | 132651..132974 | - | 324 | Protein_141 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|