MGE detailed information
MGE type: Conjugative plasmid MGE length: 119377 bp
Accession: NZ_CP104518 Location: 1..119377 Organism: Escherichia coli strain E4 Replicon: plasmid p2
Accession: NZ_CP104518 Location: 1..119377 Organism: Escherichia coli strain E4 Replicon: plasmid p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O79_RS25035 (N5O79_25035) | 1..873 | + | 873 | WP_021532687.1 | incFII family plasmid replication initiator RepA | - |
| N5O79_RS25040 (N5O79_25040) | 1565..1723 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| N5O79_RS25045 (N5O79_25045) | 1778..2047 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| N5O79_RS25050 (N5O79_25050) | 2047..2325 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| N5O79_RS25055 (N5O79_25055) | 2365..3213 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| N5O79_RS25060 (N5O79_25060) | 3450..3575 | - | 126 | Protein_5 | MerR family transcriptional regulator | - |
| N5O79_RS25065 (N5O79_25065) | 3570..4184 | + | 615 | Protein_6 | transposase | - |
| N5O79_RS25070 (N5O79_25070) | 4193..5053 | + | 861 | WP_000493383.1 | EamA family transporter | - |
| N5O79_RS25075 (N5O79_25075) | 5085..6284 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| N5O79_RS25080 (N5O79_25080) | 6390..7040 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| N5O79_RS25085 (N5O79_25085) | 7072..7314 | - | 243 | WP_000844627.1 | transposase | - |
| N5O79_RS25090 (N5O79_25090) | 8317..8751 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| N5O79_RS25095 (N5O79_25095) | 8823..9173 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| N5O79_RS25100 (N5O79_25100) | 9187..9462 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| N5O79_RS25105 (N5O79_25105) | 9498..9920 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| N5O79_RS25110 (N5O79_25110) | 9972..11666 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| N5O79_RS25115 (N5O79_25115) | 11684..12046 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| N5O79_RS25120 (N5O79_25120) | 12043..12279 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| N5O79_RS25125 (N5O79_25125) | 12315..12983 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| N5O79_RS25130 (N5O79_25130) | 13058..14737 | + | 1680 | WP_000179844.1 | DDE-type integrase/transposase/recombinase | - |
| N5O79_RS25135 (N5O79_25135) | 14740..15600 | + | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| N5O79_RS25140 (N5O79_25140) | 15702..17225 | + | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| N5O79_RS25145 (N5O79_25145) | 17215..17997 | + | 783 | WP_001163403.1 | IS21 family transposase IS1326 | Transposase |
| N5O79_RS25150 (N5O79_25150) | 18173..18673 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| N5O79_RS25155 (N5O79_25155) | 18801..19640 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| N5O79_RS25160 (N5O79_25160) | 19634..19981 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| N5O79_RS25165 (N5O79_25165) | 20199..21434 | - | 1236 | WP_001137513.1 | IS256 family transposase ISEc58 | Transposase |
| N5O79_RS25170 (N5O79_25170) | 21702..23195 | - | 1494 | WP_042038115.1 | IS91 family transposase ISVsa3 | Transposase |
| N5O79_RS25175 (N5O79_25175) | 23420..25057 | - | 1638 | WP_000719078.1 | 60 kDa chaperonin | VF |
| N5O79_RS25180 (N5O79_25180) | 25113..25433 | - | 321 | WP_000535481.1 | co-chaperone GroES | - |
| N5O79_RS25185 (N5O79_25185) | 25640..26539 | - | 900 | WP_000131886.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| N5O79_RS25190 (N5O79_25190) | 26659..27497 | - | 839 | Protein_31 | Streptomycin 3''-adenylyltransferase | ARG |
| N5O79_RS25195 (N5O79_25195) | 27646..28659 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| N5O79_RS25200 (N5O79_25200) | 28862..29212 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| N5O79_RS25205 (N5O79_25205) | 29338..29898 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| N5O79_RS25210 (N5O79_25210) | 29901..32867 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| N5O79_RS25215 (N5O79_25215) | 32801..33292 | + | 492 | WP_000068661.1 | hypothetical protein | - |
| N5O79_RS25220 (N5O79_25220) | 33769..34035 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| N5O79_RS25225 (N5O79_25225) | 34035..34529 | - | 495 | WP_001442119.1 | hypothetical protein | - |
| N5O79_RS25230 (N5O79_25230) | 34585..35187 | - | 603 | WP_000517689.1 | ProQ/FINO family protein | - |
| N5O79_RS25235 (N5O79_25235) | 35541..36887 | + | 1347 | WP_001132019.1 | protein YagA | - |
| N5O79_RS25240 (N5O79_25240) | 37166..38953 | + | 1788 | WP_250394606.1 | colicin Ia central receptor-binding domain-containing protein | - |
| N5O79_RS25245 (N5O79_25245) | 38977..39045 | + | 69 | WP_250394607.1 | hypothetical protein | - |
| N5O79_RS25250 (N5O79_25250) | 39063..39410 | - | 348 | WP_000762580.1 | colicin E1 family microcin immunity protein | - |
| N5O79_RS25255 (N5O79_25255) | 39529..39876 | + | 348 | WP_000142424.1 | DUF6404 family protein | - |
| N5O79_RS25260 (N5O79_25260) | 39894..40484 | - | 591 | WP_000194555.1 | hypothetical protein | - |
| N5O79_RS25265 (N5O79_25265) | 40481..40741 | - | 261 | WP_000343102.1 | hypothetical protein | - |
| N5O79_RS25270 (N5O79_25270) | 41309..41722 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| N5O79_RS25275 (N5O79_25275) | 41724..42506 | + | 783 | WP_058799171.1 | site-specific integrase | - |
| N5O79_RS25280 (N5O79_25280) | 42637..42912 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| N5O79_RS25285 (N5O79_25285) | 42906..43550 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| N5O79_RS25290 (N5O79_25290) | 43779..44750 | + | 972 | WP_001103691.1 | plasmid segregation protein ParM | - |
| N5O79_RS25295 (N5O79_25295) | 44755..45147 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| N5O79_RS25300 (N5O79_25300) | 45152..46423 | - | 1272 | WP_058799170.1 | Y-family DNA polymerase | - |
| N5O79_RS25305 (N5O79_25305) | 46423..46860 | - | 438 | WP_058799169.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N5O79_RS25310 (N5O79_25310) | 46857..47105 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| N5O79_RS25315 (N5O79_25315) | 47523..48425 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| N5O79_RS25320 (N5O79_25320) | 48422..48733 | + | 312 | WP_031942433.1 | hypothetical protein | - |
| N5O79_RS25325 (N5O79_25325) | 48809..49492 | + | 684 | WP_000086147.1 | DNA methylase | - |
| N5O79_RS25330 (N5O79_25330) | 49493..49714 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| N5O79_RS25335 (N5O79_25335) | 49728..50162 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| N5O79_RS25340 (N5O79_25340) | 50208..50984 | + | 777 | WP_052929989.1 | hypothetical protein | - |
| N5O79_RS25345 (N5O79_25345) | 51400..51825 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| N5O79_RS25350 (N5O79_25350) | 51872..52294 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| N5O79_RS25355 (N5O79_25355) | 52291..52482 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| N5O79_RS25360 (N5O79_25360) | 52553..52867 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| N5O79_RS25365 (N5O79_25365) | 53235..53669 | + | 435 | WP_029392001.1 | hypothetical protein | - |
| N5O79_RS25370 (N5O79_25370) | 53761..54027 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| N5O79_RS25375 (N5O79_25375) | 54092..55009 | + | 918 | WP_029392002.1 | Recombination-promoting nuclease RpnA | VF |
| N5O79_RS25380 (N5O79_25380) | 55032..55229 | + | 198 | WP_072224325.1 | hypothetical protein | - |
| N5O79_RS25385 (N5O79_25385) | 55260..55511 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| N5O79_RS25390 (N5O79_25390) | 55545..55847 | - | 303 | WP_166783726.1 | hypothetical protein | - |
| N5O79_RS25395 (N5O79_25395) | 56091..56939 | + | 849 | WP_021532736.1 | DUF4942 domain-containing protein | - |
| N5O79_RS25400 (N5O79_25400) | 57025..57360 | - | 336 | WP_000157103.1 | hypothetical protein | - |
| N5O79_RS25405 (N5O79_25405) | 57593..57925 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| N5O79_RS25410 (N5O79_25410) | 57937..60657 | + | 2721 | WP_029391987.1 | Protein TraI | Relaxase |
| N5O79_RS25415 (N5O79_25415) | 60878..63178 | - | 2301 | WP_029392471.1 | F-type conjugative transfer protein TrbC | - |
| N5O79_RS25420 (N5O79_25420) | 63159..64277 | - | 1119 | WP_029391999.1 | DsbC family protein | - |
| N5O79_RS25425 (N5O79_25425) | 64274..65617 | - | 1344 | WP_172686572.1 | conjugal transfer protein TrbA | - |
| N5O79_RS25430 (N5O79_25430) | 66074..66250 | - | 177 | WP_032172741.1 | hypothetical protein | - |
| N5O79_RS25435 (N5O79_25435) | 66401..66868 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| N5O79_RS25440 (N5O79_25440) | 67028..67651 | + | 624 | WP_001155252.1 | helix-turn-helix domain-containing protein | - |
| N5O79_RS25445 (N5O79_25445) | 67849..68064 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| N5O79_RS25450 (N5O79_25450) | 68068..68436 | - | 369 | WP_029391948.1 | hypothetical protein | - |
| N5O79_RS25455 (N5O79_25455) | 68448..68639 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| N5O79_RS25460 (N5O79_25460) | 68735..68977 | - | 243 | WP_029391947.1 | hypothetical protein | - |
| N5O79_RS25465 (N5O79_25465) | 69306..69458 | + | 153 | WP_021532728.1 | Hok/Gef family protein | - |
| N5O79_RS25470 (N5O79_25470) | 69772..69903 | - | 132 | Protein_87 | ethanolamine utilization protein EutE | - |
| N5O79_RS25475 (N5O79_25475) | 69998..70207 | + | 210 | WP_000062946.1 | HEAT repeat domain-containing protein | - |
| N5O79_RS25480 (N5O79_25480) | 70272..70925 | - | 654 | WP_029391946.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| N5O79_RS25485 (N5O79_25485) | 71013..73178 | - | 2166 | WP_029391945.1 | DotA/TraY family protein | - |
| N5O79_RS25490 (N5O79_25490) | 73251..73820 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| N5O79_RS25495 (N5O79_25495) | 73817..75022 | - | 1206 | WP_029391944.1 | conjugal transfer protein TraW | - |
| N5O79_RS25500 (N5O79_25500) | 74983..75600 | - | 618 | WP_029391943.1 | hypothetical protein | - |
| N5O79_RS25505 (N5O79_25505) | 75600..78644 | - | 3045 | WP_029391942.1 | conjugal transfer protein | - |
| N5O79_RS25510 (N5O79_25510) | 78820..79203 | - | 384 | WP_011310086.1 | hypothetical protein | - |
| N5O79_RS25515 (N5O79_25515) | 79200..79505 | - | 306 | WP_261307176.1 | hypothetical protein | - |
| N5O79_RS25520 (N5O79_25520) | 79704..80021 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| N5O79_RS25525 (N5O79_25525) | 80018..80551 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| N5O79_RS25530 (N5O79_25530) | 80645..81790 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| N5O79_RS25535 (N5O79_25535) | 82114..83376 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| N5O79_RS25540 (N5O79_25540) | 83473..83658 | - | 186 | WP_029394194.1 | hypothetical protein | - |
| N5O79_RS25545 (N5O79_25545) | 83713..84531 | - | 819 | WP_072132149.1 | conjugal transfer protein TraT | - |
| N5O79_RS25550 (N5O79_25550) | 84545..84697 | - | 153 | Protein_103 | TraS | - |
| N5O79_RS25555 (N5O79_25555) | 84754..85152 | - | 399 | WP_029391936.1 | hypothetical protein | - |
| N5O79_RS25560 (N5O79_25560) | 85199..85729 | - | 531 | WP_000987022.1 | conjugal transfer protein TraQ | - |
| N5O79_RS25565 (N5O79_25565) | 85726..86439 | - | 714 | WP_021532717.1 | conjugal transfer protein TraP | - |
| N5O79_RS25570 (N5O79_25570) | 86436..87767 | - | 1332 | WP_029391934.1 | conjugal transfer protein TraO | - |
| N5O79_RS25575 (N5O79_25575) | 87771..88745 | - | 975 | WP_029391933.1 | hypothetical protein | VF |
| N5O79_RS25580 (N5O79_25580) | 88756..89451 | - | 696 | WP_029391932.1 | DotI/IcmL family type IV secretion protein | - |
| N5O79_RS25585 (N5O79_25585) | 89463..89813 | - | 351 | WP_021532713.1 | hypothetical protein | - |
| N5O79_RS25590 (N5O79_25590) | 89830..93891 | - | 4062 | WP_029391931.1 | DUF5710 domain-containing protein | - |
| N5O79_RS25595 (N5O79_25595) | 93955..94245 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| N5O79_RS25600 (N5O79_25600) | 94242..95390 | - | 1149 | WP_000625247.1 | putative protein YggR | VF |
| N5O79_RS25605 (N5O79_25605) | 95374..96210 | - | 837 | WP_029391930.1 | hypothetical protein | VF |
| N5O79_RS25610 (N5O79_25610) | 96207..96659 | - | 453 | WP_001081199.1 | DotD/TraH family lipoprotein | - |
| N5O79_RS25615 (N5O79_25615) | 96708..96878 | - | 171 | WP_001597011.1 | hypothetical protein | - |
| N5O79_RS25620 (N5O79_25620) | 97018..98220 | - | 1203 | WP_029391929.1 | conjugal transfer protein TraF | - |
| N5O79_RS25625 (N5O79_25625) | 98310..99131 | - | 822 | WP_000804089.1 | hypothetical protein | - |
| N5O79_RS25630 (N5O79_25630) | 99382..99927 | - | 546 | WP_029391928.1 | hypothetical protein | - |
| N5O79_RS25635 (N5O79_25635) | 100046..100327 | - | 282 | WP_029391927.1 | hypothetical protein | - |
| N5O79_RS25640 (N5O79_25640) | 100368..101537 | - | 1170 | WP_029391926.1 | site-specific integrase | - |
| N5O79_RS25645 (N5O79_25645) | 101980..102402 | + | 423 | WP_235840337.1 | hypothetical protein | - |
| N5O79_RS25650 (N5O79_25650) | 103176..103598 | + | 423 | WP_261307177.1 | hypothetical protein | - |
| N5O79_RS25655 (N5O79_25655) | 103688..104980 | - | 1293 | WP_261307178.1 | hypothetical protein | VF |
| N5O79_RS25660 (N5O79_25660) | 104977..105684 | - | 708 | WP_202110611.1 | A24 family peptidase | - |
| N5O79_RS25665 (N5O79_25665) | 105644..106120 | - | 477 | WP_029391914.1 | hypothetical protein | VF |
| N5O79_RS25670 (N5O79_25670) | 106179..106715 | - | 537 | WP_029391915.1 | type 4 pilus major pilin | - |
| N5O79_RS25675 (N5O79_25675) | 106766..107866 | - | 1101 | WP_029391916.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| N5O79_RS25680 (N5O79_25680) | 107868..109376 | - | 1509 | WP_261307179.1 | Type II secretion system protein E | VF |
| N5O79_RS25685 (N5O79_25685) | 109473..110147 | - | 675 | WP_224466094.1 | hypothetical protein | - |
| N5O79_RS25690 (N5O79_25690) | 110165..110719 | - | 555 | WP_021532699.1 | hypothetical protein | - |
| N5O79_RS25695 (N5O79_25695) | 110768..111220 | - | 453 | WP_029391918.1 | hypothetical protein | VF |
| N5O79_RS25700 (N5O79_25700) | 111210..112505 | - | 1296 | WP_021532697.1 | type 4b pilus protein PilO2 | - |
| N5O79_RS25705 (N5O79_25705) | 112526..114145 | - | 1620 | WP_021532696.1 | Outer membrane lipoprotein BfpB | VF |
| N5O79_RS25710 (N5O79_25710) | 114176..114613 | - | 438 | WP_021532695.1 | type IV pilus biogenesis protein PilM | - |
| N5O79_RS25715 (N5O79_25715) | 114618..115688 | - | 1071 | WP_029391919.1 | hypothetical protein | VF |
| N5O79_RS25720 (N5O79_25720) | 115810..116205 | + | 396 | WP_029391920.1 | hypothetical protein | - |
| N5O79_RS25725 (N5O79_25725) | 116710..116952 | - | 243 | WP_021532691.1 | PilI type IV pilus biogenesis protein | - |
| N5O79_RS25730 (N5O79_25730) | 117013..117186 | - | 174 | Protein_139 | hypothetical protein | - |
| N5O79_RS25735 (N5O79_25735) | 117229..117894 | - | 666 | WP_029391921.1 | hypothetical protein | - |
| N5O79_RS25740 (N5O79_25740) | 118036..118542 | - | 507 | WP_029391922.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|