MGE detailed information
MGE type: Genomic_island MGE length: 10242 bp
Accession: NZ_CP104491 Location: 850749..860990 Organism: Salmonella enterica strain SalSpp_sample_05_No.1 Replicon: chromosome
Accession: NZ_CP104491 Location: 850749..860990 Organism: Salmonella enterica strain SalSpp_sample_05_No.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4229_RS04055 (846216) | 846216..847314 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| N4229_RS04060 (847324) | 847324..848841 | + | 1518 | WP_050067888.1 | lysine--tRNA ligase | - |
| N4229_RS04065 (848917) | 848917..849462 | - | 546 | WP_050067887.1 | isopentenyl-diphosphate Delta-isomerase | - |
| N4229_RS04070 (849727) | 849727..850503 | + | 777 | WP_000244321.1 | amidase activator ActS | - |
| N4229_RS04080 (850749) | 850749..850961 | - | 213 | WP_024133381.1 | hypothetical protein | - |
| N4229_RS04085 (851170) | 851170..851397 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| N4229_RS04090 (851397) | 851397..851795 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| N4229_RS04095 (852599) | 852599..853135 | + | 537 | WP_050067886.1 | Attachment invasion locus protein | VF |
| N4229_RS04100 (853182) | 853182..853814 | + | 633 | WP_023208692.1 | YfdX family protein | - |
| N4229_RS04105 (854533) | 854533..855126 | + | 594 | WP_047606481.1 | putative fimbrial-like protein YbgD | VF |
| N4229_RS04110 (855246) | 855246..857735 | + | 2490 | WP_050067885.1 | Outer membrane usher protein PapC | VF |
| N4229_RS04115 (857776) | 857776..858519 | + | 744 | WP_020899186.1 | Chaperone protein PapD | VF |
| N4229_RS04120 (858516) | 858516..859589 | + | 1074 | WP_079802113.1 | hypothetical protein | - |
| N4229_RS04125 (859733) | 859733..860245 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| N4229_RS04130 (860232) | 860232..860990 | + | 759 | WP_057935474.1 | hypothetical protein | - |
| N4229_RS04135 (861200) | 861200..862036 | - | 837 | WP_000503692.1 | nickel/cobalt efflux protein RcnA | - |
| N4229_RS04140 (862158) | 862158..862430 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| N4229_RS04145 (862461) | 862461..863690 | - | 1230 | WP_000036824.1 | amino acid permease | - |
| N4229_RS04150 (863832) | 863832..864287 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| N4229_RS04155 (864391) | 864391..865254 | + | 864 | WP_001270769.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|