MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP104484 Location: 1027658..1038084 Organism: Salmonella enterica strain SalSpp_sample_07_No.3 Replicon: chromosome
Accession: NZ_CP104484 Location: 1027658..1038084 Organism: Salmonella enterica strain SalSpp_sample_07_No.3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4231_RS04925 (1022771) | 1022771..1023151 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| N4231_RS04930 (1023207) | 1023207..1025774 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| N4231_RS04935 (1025933) | 1025933..1026454 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| N4231_RS04940 (1026626) | 1026626..1027282 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| N4231_RS04945 (1027629) | 1027629..1027834 | + | 206 | Protein_970 | IS5 family transposase ISEcl3 | Transposase |
| N4231_RS04950 (1027907) | 1027907..1028434 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| N4231_RS04955 (1028431) | 1028431..1028721 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| N4231_RS04960 (1028991) | 1028991..1029169 | - | 179 | Protein_973 | IS3 family transposase | - |
| N4231_RS04965 (1029410) | 1029410..1029736 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| N4231_RS04970 (1030009) | 1030009..1030356 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| N4231_RS04975 (1030341) | 1030341..1030790 | - | 450 | WP_000381610.1 | membrane protein | - |
| N4231_RS04980 (1031221) | 1031221..1031664 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| N4231_RS04985 (1032121) | 1032121..1032771 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| N4231_RS04990 (1032768) | 1032768..1034456 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| N4231_RS04995 (1034453) | 1034453..1035571 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| N4231_RS05000 (1035596) | 1035596..1037653 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| N4231_RS05005 (1037677) | 1037677..1038084 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| N4231_RS05010 (1038081) | 1038081..1039376 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| N4231_RS05015 (1039354) | 1039354..1039797 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| N4231_RS05020 (1039797) | 1039797..1040807 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| N4231_RS05025 (1040807) | 1040807..1041718 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| N4231_RS05030 (1041708) | 1041708..1042382 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| N4231_RS05035 (1042408) | 1042408..1042668 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |