MGE detailed information
MGE type: Genomic_island MGE length: 11325 bp
Accession: NZ_CP104482 Location: 850389..861713 Organism: Salmonella enterica strain SalSpp_sample_08_No.4 Replicon: chromosome
Accession: NZ_CP104482 Location: 850389..861713 Organism: Salmonella enterica strain SalSpp_sample_08_No.4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4230_RS04065 (845835) | 845835..846933 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| N4230_RS04070 (846943) | 846943..848460 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| N4230_RS04075 (848536) | 848536..849081 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| N4230_RS04080 (849346) | 849346..850104 | + | 759 | WP_000244325.1 | amidase activator ActS | - |
| N4230_RS04090 (850389) | 850389..851195 | - | 807 | WP_077907190.1 | DUF1460 domain-containing protein | - |
| N4230_RS04095 (851470) | 851470..851721 | - | 252 | WP_001748683.1 | hypothetical protein | - |
| N4230_RS04100 (851930) | 851930..852157 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| N4230_RS04105 (852157) | 852157..852555 | + | 399 | WP_001748684.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| N4230_RS04110 (853361) | 853361..853897 | + | 537 | WP_001038506.1 | Attachment invasion locus protein | VF |
| N4230_RS04115 (853944) | 853944..854576 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| N4230_RS04120 (855295) | 855295..855882 | + | 588 | WP_001244643.1 | putative fimbrial-like protein YbgD | VF |
| N4230_RS04125 (856002) | 856002..858491 | + | 2490 | WP_093984172.1 | Outer membrane usher protein PapC | VF |
| N4230_RS04130 (858532) | 858532..859275 | + | 744 | WP_080192296.1 | Chaperone protein PapD | VF |
| N4230_RS04135 (859272) | 859272..860351 | + | 1080 | WP_093984173.1 | fimbrial protein | - |
| N4230_RS04140 (860462) | 860462..860968 | + | 507 | WP_000093333.1 | CaiF/GrlA family transcriptional regulator | - |
| N4230_RS04145 (860955) | 860955..861713 | + | 759 | WP_080192294.1 | transcriptional regulator | - |
| N4230_RS04150 (861923) | 861923..862777 | - | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| N4230_RS04155 (862899) | 862899..863171 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| N4230_RS04160 (863202) | 863202..864431 | - | 1230 | WP_017465479.1 | amino acid permease | - |
| N4230_RS04165 (864573) | 864573..865028 | - | 456 | WP_017465480.1 | multidrug/biocide efflux PACE transporter | - |
| N4230_RS04170 (865132) | 865132..865995 | + | 864 | WP_017465481.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|